Literature DB >> 24098170

Bis[1-meth-oxy-2,2,2-tris-(pyrazol-1-yl-κN (2))ethane]-nickel(II) bis-(tri-fluoro-methane-sulfonate) methanol disolvate.

Ganna Lyubartseva1, Sean Parkin, Uma Prasad Mallik.   

Abstract

In the title salt, [Ni(C12H14N6O)2](CF3SO3)2·2CH3OH, the Ni(II) ion is coordinated by six N atoms from two tridentate 1-meth-oxy-2,2,2-tris-(pyrazol-1-yl)ethane ligands in a distorted octa-hedral geometry. The Ni(II) ion is situated on an inversion centre. The Ni-N distances range from 2.0589 (19) to 2.0757 (19) Å, intra-ligand N-Ni-N angles range from 84.50 (8) to 85.15 (8)°, and adjacent inter-ligand N-Ni-N angles range between 94.85 (8) and 95.50 (8)°. In the crystal, O-H⋯O hydrogen bonds between methanol solvent mol-ecules and tri-fluoro-methane-sulfonate anions are observed.

Entities:  

Year:  2013        PMID: 24098170      PMCID: PMC3790348          DOI: 10.1107/S1600536813024653

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Pyrazole-based tridentate ligands are drawing attention because of their topology and the nature of the donor atoms, see: Paulo et al. (2004 ▶); Bigmore et al. (2005 ▶). For the synthesis of the ligand, see: Maria et al. (2007 ▶). The compound reported here was prepared as part of our ongoing research effort to study nitro­gen donor tridentate scorpionate ligands coordinating to nickel, see: Lyubartseva et al. (2011 ▶, 2012 ▶); Lyubartseva & Parkin (2009 ▶).

Experimental

Crystal data

[Ni(C12H14N6O)2](CF3O3S)2·2CH4O M = 937.52 Triclinic, a = 9.0025 (2) Å b = 9.5921 (2) Å c = 11.9914 (2) Å α = 105.2683 (8)° β = 103.4796 (8)° γ = 102.2596 (8)° V = 929.15 (3) Å3 Z = 1 Mo Kα radiation μ = 0.74 mm−1 T = 90 K 0.19 × 0.18 × 0.15 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2008a ▶) T min = 0.753, T max = 0.898 22611 measured reflections 4271 independent reflections 3292 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.105 S = 1.10 4271 reflections 271 parameters H-atom parameters constrained Δρmax = 0.45 e Å−3 Δρmin = −0.48 e Å−3 Data collection: COLLECT (Nonius, 1998 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO-SMN (Otwinowski & Minor, 1997 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008b ▶); program(s) used to refine structure: SHELXL2013 (Sheldrick, 2008b ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008b ▶); software used to prepare material for publication: SHELXL2013. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813024653/lh5647sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024653/lh5647Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C12H14N6O)2](CF3O3S)2·2CH4OZ = 1
Mr = 937.52F(000) = 482
Triclinic, P1Dx = 1.675 Mg m3
a = 9.0025 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.5921 (2) ÅCell parameters from 4236 reflections
c = 11.9914 (2) Åθ = 1.0–27.5°
α = 105.2683 (8)°µ = 0.74 mm1
β = 103.4796 (8)°T = 90 K
γ = 102.2596 (8)°Block, pink
V = 929.15 (3) Å30.19 × 0.18 × 0.15 mm
Nonius KappaCCD diffractometer4271 independent reflections
Radiation source: fine-focus sealed-tube3292 reflections with I > 2σ(I)
Detector resolution: 9.1 pixels mm-1Rint = 0.040
φ and ω scans at fixed χ = 55°θmax = 27.5°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Sheldrick, 2008a)h = −11→11
Tmin = 0.753, Tmax = 0.898k = −12→12
22611 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0411P)2 + 1.0985P] where P = (Fo2 + 2Fc2)/3
4271 reflections(Δ/σ)max < 0.001
271 parametersΔρmax = 0.45 e Å3
0 restraintsΔρmin = −0.48 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
Ni10.50000.50000.50000.01541 (12)
N10.5656 (2)0.7100 (2)0.63001 (18)0.0170 (4)
N20.7195 (2)0.7717 (2)0.70477 (17)0.0146 (4)
C10.4910 (3)0.8115 (3)0.6624 (2)0.0183 (5)
H10.38140.79930.62550.022*
C20.5939 (3)0.9387 (3)0.7576 (2)0.0215 (5)
H20.56881.02640.79680.026*
C30.7388 (3)0.9105 (3)0.7828 (2)0.0188 (5)
H30.83470.97570.84330.023*
N30.6331 (2)0.4422 (2)0.63761 (18)0.0166 (4)
N40.7765 (2)0.5424 (2)0.71273 (17)0.0148 (4)
C40.6123 (3)0.3275 (3)0.6808 (2)0.0199 (5)
H40.52240.24010.64680.024*
C50.7402 (3)0.3530 (3)0.7828 (2)0.0211 (5)
H50.75360.28810.82960.025*
C60.8421 (3)0.4903 (3)0.8014 (2)0.0187 (5)
H60.94050.54000.86460.022*
N50.7151 (2)0.5746 (2)0.47104 (17)0.0162 (4)
N60.8478 (2)0.6538 (2)0.56911 (17)0.0156 (4)
C70.7638 (3)0.5711 (3)0.3745 (2)0.0195 (5)
H70.69680.52330.29290.023*
C80.9267 (3)0.6469 (3)0.4085 (2)0.0210 (5)
H80.98950.65920.35630.025*
C90.9763 (3)0.6993 (3)0.5324 (2)0.0185 (5)
H91.08120.75690.58350.022*
C100.8346 (3)0.6854 (3)0.6921 (2)0.0150 (5)
C110.9962 (3)0.7798 (3)0.7859 (2)0.0170 (5)
H11A1.03370.87610.77120.020*
H11B0.98580.80340.86880.020*
O11.10620 (19)0.69583 (18)0.77534 (15)0.0191 (4)
C121.2450 (3)0.7555 (3)0.8798 (2)0.0267 (6)
H12A1.30660.85440.88240.040*
H12B1.31110.68640.87520.040*
H12C1.21240.76670.95340.040*
S1A0.85393 (7)0.75255 (7)0.11470 (5)0.02007 (15)
O1A0.8467 (3)0.6007 (2)0.11115 (19)0.0381 (5)
O2A0.8839 (2)0.8585 (2)0.23378 (15)0.0252 (4)
O3A0.9434 (2)0.8109 (3)0.04420 (17)0.0406 (6)
C1A0.6486 (3)0.7358 (3)0.0358 (2)0.0261 (6)
F1A0.60356 (18)0.64929 (18)−0.08066 (13)0.0306 (4)
F2A0.6306 (3)0.8709 (2)0.03702 (18)0.0555 (6)
F3A0.5478 (2)0.6780 (2)0.08729 (17)0.0503 (5)
O1S0.7190 (2)0.9839 (2)0.38362 (17)0.0275 (4)
H1S0.76990.93740.34450.041*
C1S0.7689 (3)0.9892 (3)0.5057 (3)0.0286 (6)
H1S10.88501.03350.53930.043*
H1S20.73960.88660.50960.043*
H1S30.71671.05120.55290.043*
U11U22U33U12U13U23
Ni10.0140 (2)0.0148 (2)0.0151 (2)0.00295 (17)0.00210 (17)0.00417 (17)
N10.0132 (10)0.0165 (10)0.0173 (10)0.0023 (8)0.0016 (8)0.0039 (8)
N20.0119 (9)0.0146 (9)0.0155 (10)0.0033 (8)0.0024 (8)0.0039 (8)
C10.0184 (12)0.0176 (12)0.0196 (12)0.0078 (10)0.0047 (10)0.0064 (10)
C20.0225 (13)0.0173 (12)0.0246 (13)0.0075 (10)0.0075 (10)0.0051 (10)
C30.0188 (12)0.0154 (12)0.0178 (12)0.0023 (9)0.0042 (10)0.0020 (9)
N30.0129 (9)0.0153 (10)0.0167 (10)0.0006 (8)0.0009 (8)0.0036 (8)
N40.0136 (9)0.0137 (9)0.0150 (10)0.0030 (8)0.0023 (8)0.0039 (8)
C40.0207 (12)0.0174 (12)0.0212 (12)0.0035 (10)0.0058 (10)0.0079 (10)
C50.0229 (13)0.0207 (12)0.0210 (13)0.0056 (10)0.0053 (10)0.0109 (10)
C60.0185 (12)0.0198 (12)0.0181 (12)0.0067 (10)0.0039 (10)0.0073 (10)
N50.0143 (10)0.0168 (10)0.0130 (10)0.0014 (8)0.0006 (8)0.0031 (8)
N60.0144 (10)0.0172 (10)0.0127 (9)0.0035 (8)0.0026 (8)0.0032 (8)
C70.0209 (12)0.0199 (12)0.0165 (12)0.0047 (10)0.0058 (10)0.0050 (10)
C80.0234 (13)0.0219 (13)0.0222 (13)0.0077 (10)0.0122 (10)0.0092 (10)
C90.0150 (11)0.0188 (12)0.0223 (13)0.0046 (9)0.0068 (10)0.0072 (10)
C100.0144 (11)0.0154 (11)0.0147 (11)0.0041 (9)0.0028 (9)0.0059 (9)
C110.0140 (11)0.0160 (11)0.0168 (12)0.0028 (9)0.0021 (9)0.0024 (9)
O10.0132 (8)0.0203 (9)0.0198 (9)0.0063 (7)0.0003 (7)0.0034 (7)
C120.0170 (13)0.0287 (14)0.0262 (14)0.0077 (11)−0.0035 (11)0.0040 (11)
S1A0.0172 (3)0.0233 (3)0.0172 (3)0.0048 (2)0.0039 (2)0.0049 (2)
O1A0.0420 (12)0.0284 (11)0.0354 (12)0.0180 (9)−0.0050 (9)0.0053 (9)
O2A0.0288 (10)0.0268 (10)0.0166 (9)0.0059 (8)0.0059 (8)0.0043 (7)
O3A0.0269 (11)0.0574 (14)0.0206 (10)−0.0127 (10)0.0082 (8)0.0045 (10)
C1A0.0256 (14)0.0271 (14)0.0246 (14)0.0103 (11)0.0070 (11)0.0053 (11)
F1A0.0256 (8)0.0333 (9)0.0226 (8)0.0081 (7)−0.0013 (6)0.0008 (7)
F2A0.0671 (14)0.0359 (10)0.0487 (12)0.0332 (10)−0.0113 (10)0.0014 (9)
F3A0.0248 (9)0.0771 (14)0.0403 (11)0.0038 (9)0.0153 (8)0.0096 (10)
O1S0.0268 (10)0.0322 (11)0.0262 (10)0.0138 (8)0.0083 (8)0.0096 (8)
C1S0.0317 (15)0.0238 (14)0.0305 (15)0.0068 (12)0.0099 (12)0.0098 (12)
Ni1—N5i2.0589 (19)N6—C101.464 (3)
Ni1—N52.059 (2)C7—C81.399 (3)
Ni1—N1i2.0611 (19)C7—H70.9500
Ni1—N12.0611 (19)C8—C91.364 (3)
Ni1—N3i2.0757 (19)C8—H80.9500
Ni1—N32.0757 (19)C9—H90.9500
N1—C11.323 (3)C10—C111.531 (3)
N1—N21.366 (3)C11—O11.410 (3)
N2—C31.359 (3)C11—H11A0.9900
N2—C101.468 (3)C11—H11B0.9900
C1—C21.394 (3)O1—C121.431 (3)
C1—H10.9500C12—H12A0.9800
C2—C31.369 (3)C12—H12B0.9800
C2—H20.9500C12—H12C0.9800
C3—H30.9500S1A—O3A1.432 (2)
N3—C41.331 (3)S1A—O1A1.433 (2)
N3—N41.369 (3)S1A—O2A1.4437 (18)
N4—C61.357 (3)S1A—C1A1.821 (3)
N4—C101.466 (3)C1A—F3A1.318 (3)
C4—C51.396 (3)C1A—F2A1.336 (3)
C4—H40.9500C1A—F1A1.337 (3)
C5—C61.364 (4)O1S—C1S1.411 (3)
C5—H50.9500O1S—H1S0.8400
C6—H60.9500C1S—H1S10.9800
N5—C71.324 (3)C1S—H1S20.9800
N5—N61.370 (3)C1S—H1S30.9800
N6—C91.359 (3)
N5i—Ni1—N5180.0C9—N6—C10129.4 (2)
N5i—Ni1—N1i85.15 (8)N5—N6—C10119.86 (18)
N5—Ni1—N1i94.85 (8)N5—C7—C8111.1 (2)
N5i—Ni1—N194.85 (8)N5—C7—H7124.4
N5—Ni1—N185.15 (8)C8—C7—H7124.4
N1i—Ni1—N1180.00 (11)C9—C8—C7105.6 (2)
N5i—Ni1—N3i84.78 (8)C9—C8—H8127.2
N5—Ni1—N3i95.22 (8)C7—C8—H8127.2
N1i—Ni1—N3i84.50 (8)N6—C9—C8107.2 (2)
N1—Ni1—N3i95.50 (8)N6—C9—H9126.4
N5i—Ni1—N395.22 (8)C8—C9—H9126.4
N5—Ni1—N384.78 (8)N6—C10—N4109.33 (18)
N1i—Ni1—N395.50 (8)N6—C10—N2109.35 (18)
N1—Ni1—N384.50 (8)N4—C10—N2108.62 (18)
N3i—Ni1—N3180.00 (8)N6—C10—C11110.37 (19)
C1—N1—N2105.50 (19)N4—C10—C11110.87 (18)
C1—N1—Ni1134.77 (17)N2—C10—C11108.27 (18)
N2—N1—Ni1119.73 (14)O1—C11—C10108.34 (18)
C3—N2—N1110.70 (19)O1—C11—H11A110.0
C3—N2—C10130.25 (19)C10—C11—H11A110.0
N1—N2—C10119.05 (18)O1—C11—H11B110.0
N1—C1—C2111.3 (2)C10—C11—H11B110.0
N1—C1—H1124.4H11A—C11—H11B108.4
C2—C1—H1124.4C11—O1—C12111.62 (18)
C3—C2—C1105.5 (2)O1—C12—H12A109.5
C3—C2—H2127.2O1—C12—H12B109.5
C1—C2—H2127.2H12A—C12—H12B109.5
N2—C3—C2107.0 (2)O1—C12—H12C109.5
N2—C3—H3126.5H12A—C12—H12C109.5
C2—C3—H3126.5H12B—C12—H12C109.5
C4—N3—N4105.24 (19)O3A—S1A—O1A115.91 (14)
C4—N3—Ni1135.74 (16)O3A—S1A—O2A113.55 (12)
N4—N3—Ni1118.90 (14)O1A—S1A—O2A115.10 (12)
C6—N4—N3110.88 (19)O3A—S1A—C1A103.65 (13)
C6—N4—C10129.58 (19)O1A—S1A—C1A102.79 (12)
N3—N4—C10119.51 (18)O2A—S1A—C1A103.55 (12)
N3—C4—C5110.9 (2)F3A—C1A—F2A107.0 (2)
N3—C4—H4124.6F3A—C1A—F1A108.1 (2)
C5—C4—H4124.6F2A—C1A—F1A106.9 (2)
C6—C5—C4105.9 (2)F3A—C1A—S1A111.68 (19)
C6—C5—H5127.0F2A—C1A—S1A111.05 (19)
C4—C5—H5127.0F1A—C1A—S1A111.86 (18)
N4—C6—C5107.1 (2)C1S—O1S—H1S109.5
N4—C6—H6126.5O1S—C1S—H1S1109.5
C5—C6—H6126.5O1S—C1S—H1S2109.5
C7—N5—N6105.39 (19)H1S1—C1S—H1S2109.5
C7—N5—Ni1135.53 (16)O1S—C1S—H1S3109.5
N6—N5—Ni1119.02 (14)H1S1—C1S—H1S3109.5
C9—N6—N5110.65 (18)H1S2—C1S—H1S3109.5
C1—N1—N2—C30.1 (3)N5—N6—C10—N459.9 (2)
Ni1—N1—N2—C3179.31 (15)C9—N6—C10—N2117.0 (2)
C1—N1—N2—C10179.7 (2)N5—N6—C10—N2−58.9 (3)
Ni1—N1—N2—C10−1.1 (3)C9—N6—C10—C11−2.0 (3)
N2—N1—C1—C2−0.2 (3)N5—N6—C10—C11−177.94 (18)
Ni1—N1—C1—C2−179.22 (17)C6—N4—C10—N6124.2 (2)
N1—C1—C2—C30.2 (3)N3—N4—C10—N6−58.1 (3)
N1—N2—C3—C20.0 (3)C6—N4—C10—N2−116.5 (2)
C10—N2—C3—C2−179.5 (2)N3—N4—C10—N261.2 (3)
C1—C2—C3—N2−0.1 (3)C6—N4—C10—C112.3 (3)
C4—N3—N4—C6−0.4 (3)N3—N4—C10—C11−179.97 (19)
Ni1—N3—N4—C6176.26 (15)C3—N2—C10—N6−120.8 (2)
C4—N3—N4—C10−178.5 (2)N1—N2—C10—N659.7 (3)
Ni1—N3—N4—C10−1.8 (3)C3—N2—C10—N4120.0 (2)
N4—N3—C4—C50.1 (3)N1—N2—C10—N4−59.5 (2)
Ni1—N3—C4—C5−175.75 (18)C3—N2—C10—C11−0.5 (3)
N3—C4—C5—C60.2 (3)N1—N2—C10—C11−179.99 (19)
N3—N4—C6—C50.6 (3)N6—C10—C11—O1−61.4 (2)
C10—N4—C6—C5178.4 (2)N4—C10—C11—O159.9 (2)
C4—C5—C6—N4−0.5 (3)N2—C10—C11—O1178.97 (18)
C7—N5—N6—C90.5 (3)C10—C11—O1—C12−163.6 (2)
Ni1—N5—N6—C9−177.23 (15)O3A—S1A—C1A—F3A177.87 (19)
C7—N5—N6—C10177.1 (2)O1A—S1A—C1A—F3A56.8 (2)
Ni1—N5—N6—C10−0.6 (3)O2A—S1A—C1A—F3A−63.4 (2)
N6—N5—C7—C80.1 (3)O3A—S1A—C1A—F2A−62.8 (2)
Ni1—N5—C7—C8177.22 (17)O1A—S1A—C1A—F2A176.2 (2)
N5—C7—C8—C9−0.6 (3)O2A—S1A—C1A—F2A56.0 (2)
N5—N6—C9—C8−0.9 (3)O3A—S1A—C1A—F1A56.6 (2)
C10—N6—C9—C8−177.1 (2)O1A—S1A—C1A—F1A−64.5 (2)
C7—C8—C9—N60.9 (3)O2A—S1A—C1A—F1A175.33 (18)
C9—N6—C10—N4−124.2 (2)
D—H···AD—HH···AD···AD—H···A
O1S—H1S···O2A0.841.962.782 (3)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1S—H1S⋯O2A 0.841.962.782 (3)168
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Coordination, organometallic and related chemistry of tris(pyrazolyl)methane ligands.

Authors:  Helen R Bigmore; Sally C Lawrence; Philip Mountford; Cara S Tredget
Journal:  Dalton Trans       Date:  2005-01-18       Impact factor: 4.390

3.  Bis(tripyrazol-1-ylmethane)nickel(II) tetra-cyanidonickelate(II) dihydrate.

Authors:  Ganna Lyubartseva; Sean Parkin
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-11-07

4.  Rhenium and technetium tricarbonyl complexes anchored by pyrazole-based tripods: novel lead structures for the design of myocardial imaging agents.

Authors:  Leonor Maria; Susana Cunha; Margarida Videira; Lurdes Gano; António Paulo; Isabel C Santos; Isabel Santos
Journal:  Dalton Trans       Date:  2007-06-06       Impact factor: 4.390

5.  Bis[tris-(1H-pyrazol-1-yl-κN)methane]-nickel(II) bis-{[tris-(1H-pyrazol-1-yl-κN)methane]-tris-(thio-cyanato-κN)nickelate(II)} methanol disolvate.

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-05

6.  Tetra-ethyl-ammonium tris-(thio-cyanato-κN)[tris-(1H-pyrazol-1-yl-κN(2))methane]-nickelate(II).

Authors:  Ganna Lyubartseva; Sean Parkin; Uma Prasad Mallik; Hee Kyung Jeon
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  6 in total
  1 in total

1.  Crystal structure of 1-meth-oxy-2,2,2-tris-(pyrazol-1-yl)ethane.

Authors:  Ganna Lyubartseva; Sean Parkin; Morgan D Coleman; Uma Prasad Mallik
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-23
  1 in total

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