Literature DB >> 21577992

Methyl 9-(4-bromo-phen-yl)-8a,9,9a,10,11,12,13,14a-octa-hydro-8H-benzo[f]chromeno[3,4-b]indolizine-8a-car-box-ylate.

B Gunasekaran, S Kathiravan, R Raghunathan, G Chakkaravarthi, V Manivannan.   

Abstract

In the title compound, C(27)H(26)BrNO(3), the mean plane of the naphthalene ring system makes a dihedral angle of 22.0 (1)° with the bromo-substituted benzene ring. The pyrrolidine and piperidine rings exhibit envelope and chair conformations, respectively. An inter-molecular C-H⋯Br inter-action is observed.

Entities:  

Year:  2009        PMID: 21577992      PMCID: PMC2970191          DOI: 10.1107/S1600536809037994

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of indolizine derivatives, see: Gundersen et al. (2003 ▶); Teklu et al. (2005 ▶); Foster et al. (1995 ▶); Malonne et al. (1998 ▶); Medda et al. (2003 ▶). For related structures, see: Gunasekaran et al. (2009 ▶); Kamala et al. (2009 ▶).

Experimental

Crystal data

C27H26BrNO3 M = 492.40 Trigonal, a = 18.4405 (8) Å c = 11.4828 (8) Å V = 3381.6 (3) Å3 Z = 6 Mo Kα radiation μ = 1.85 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (; Sheldrick, 1996 ▶) T min = 0.654, T max = 0.708 23085 measured reflections 5338 independent reflections 2509 reflections with I > 2σ(I) R int = 0.113

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.108 S = 0.85 5338 reflections 290 parameters 2 restraints H-atom parameters constrained Δρmax = 0.85 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809037994/is2463sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809037994/is2463Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C27H26BrNO3Dx = 1.451 Mg m3
Mr = 492.40Mo Kα radiation, λ = 0.71073 Å
Trigonal, P3Cell parameters from 4759 reflections
Hall symbol: -P 3θ = 2.2–25.7°
a = 18.4405 (8) ŵ = 1.85 mm1
c = 11.4828 (8) ÅT = 293 K
V = 3381.6 (3) Å3Block, colourless
Z = 60.25 × 0.20 × 0.20 mm
F(000) = 1524
Bruker Kappa APEXII CCD diffractometer5338 independent reflections
Radiation source: fine-focus sealed tube2509 reflections with I > 2σ(I)
graphiteRint = 0.113
Detector resolution: 0 pixels mm-1θmax = 27.8°, θmin = 2.2°
ω and φ scansh = −22→24
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)k = −24→24
Tmin = 0.654, Tmax = 0.708l = −8→15
23085 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108H-atom parameters constrained
S = 0.85w = 1/[σ2(Fo2) + (0.0452P)2] where P = (Fo2 + 2Fc2)/3
5338 reflections(Δ/σ)max < 0.001
290 parametersΔρmax = 0.85 e Å3
2 restraintsΔρmin = −0.33 e Å3
xyzUiso*/Ueq
C10.32587 (18)0.03952 (17)−0.2836 (3)0.0450 (7)
C20.2679 (2)0.0537 (2)−0.3441 (3)0.0616 (9)
H20.24010.0769−0.30500.074*
C30.2515 (3)0.0339 (2)−0.4604 (3)0.0850 (13)
H30.21230.0432−0.49820.102*
C40.2927 (3)0.0004 (2)−0.5221 (3)0.0859 (13)
H40.2821−0.0115−0.60110.103*
C50.3479 (3)−0.0149 (2)−0.4667 (3)0.0786 (12)
H50.3752−0.0375−0.50820.094*
C60.3654 (2)0.00269 (18)−0.3465 (3)0.0564 (9)
C70.4228 (2)−0.01415 (18)−0.2873 (3)0.0627 (10)
H70.4519−0.0349−0.32860.075*
C80.43567 (19)−0.00053 (17)−0.1725 (3)0.0513 (8)
H80.4704−0.0156−0.13360.062*
C90.39688 (17)0.03636 (16)−0.1111 (2)0.0384 (7)
C100.34630 (16)0.06057 (15)−0.1639 (2)0.0356 (7)
C110.32309 (16)0.11839 (16)−0.1002 (2)0.0341 (6)
H110.26690.1056−0.12420.041*
C120.32533 (15)0.11112 (16)0.0348 (2)0.0333 (6)
C130.34153 (18)0.04079 (17)0.0692 (2)0.0431 (7)
H13A0.35260.04380.15220.052*
H13B0.2920−0.01270.05310.052*
C140.41242 (18)0.23382 (17)−0.2399 (2)0.0434 (7)
H14A0.36500.2180−0.29120.052*
H14B0.44160.2053−0.26630.052*
C150.47016 (18)0.32660 (18)−0.2460 (2)0.0477 (8)
H15A0.43950.3550−0.22680.057*
H15B0.49140.3422−0.32470.057*
C160.54293 (18)0.35396 (18)−0.1621 (3)0.0492 (8)
H16A0.57650.3293−0.18500.059*
H16B0.57820.4144−0.16440.059*
C170.50984 (18)0.32634 (16)−0.0398 (2)0.0425 (7)
H17A0.55620.34040.01280.051*
H17B0.48150.3558−0.01400.051*
C180.44950 (16)0.23290 (15)−0.0361 (2)0.0329 (6)
H180.47990.2029−0.05080.039*
C190.39796 (15)0.19968 (16)0.0742 (2)0.0323 (6)
H190.37220.23420.08820.039*
C200.44263 (16)0.20142 (16)0.1853 (2)0.0326 (6)
C210.40965 (17)0.20588 (17)0.2912 (2)0.0395 (7)
H210.36120.20960.29250.047*
C220.44673 (19)0.20491 (18)0.3956 (2)0.0454 (8)
H220.42320.20720.46620.054*
C230.51857 (18)0.20047 (17)0.3933 (2)0.0414 (7)
C240.55532 (18)0.19869 (17)0.2895 (3)0.0461 (8)
H240.60530.19790.28880.055*
C250.51612 (17)0.19814 (17)0.1866 (2)0.0426 (7)
H250.53970.19550.11620.051*
C260.24417 (18)0.09807 (19)0.0883 (3)0.0456 (7)
C270.1435 (2)0.0356 (3)0.2332 (4)0.0985 (14)
H27A0.15330.08600.27140.148*
H27B0.1240−0.00910.28910.148*
H27C0.10210.02110.17350.148*
N10.38286 (13)0.20806 (12)−0.12185 (17)0.0301 (5)
O10.41141 (11)0.04609 (11)0.00670 (17)0.0446 (5)
O20.20524 (13)0.12926 (15)0.0531 (2)0.0685 (7)
O30.22148 (12)0.04877 (13)0.18093 (17)0.0569 (6)
Br10.56763 (2)0.19502 (2)0.53512 (3)0.06620 (16)
U11U22U33U12U13U23
C10.0421 (18)0.0299 (16)0.0472 (19)0.0063 (14)0.0072 (13)−0.0069 (14)
C20.056 (2)0.060 (2)0.052 (2)0.0171 (17)−0.0091 (16)−0.0117 (17)
C30.091 (3)0.073 (3)0.059 (3)0.016 (2)−0.019 (2)−0.012 (2)
C40.116 (4)0.060 (3)0.052 (3)0.021 (3)0.002 (3)−0.016 (2)
C50.110 (3)0.042 (2)0.061 (3)0.022 (2)0.020 (2)−0.0113 (19)
C60.070 (2)0.0282 (18)0.053 (2)0.0107 (17)0.0124 (18)−0.0059 (15)
C70.074 (3)0.0336 (19)0.077 (3)0.0245 (19)0.036 (2)0.0021 (18)
C80.056 (2)0.0335 (18)0.068 (2)0.0251 (16)0.0165 (18)0.0085 (16)
C90.0382 (17)0.0246 (15)0.0459 (19)0.0109 (14)0.0076 (14)0.0020 (13)
C100.0324 (16)0.0240 (15)0.0413 (17)0.0071 (13)0.0047 (13)−0.0016 (12)
C110.0281 (15)0.0342 (16)0.0382 (16)0.0142 (13)−0.0002 (12)−0.0010 (13)
C120.0313 (16)0.0295 (15)0.0368 (16)0.0134 (13)0.0027 (12)0.0023 (12)
C130.0474 (19)0.0340 (17)0.0440 (17)0.0175 (15)0.0040 (14)0.0025 (13)
C140.0450 (18)0.0462 (19)0.0402 (17)0.0236 (16)0.0022 (14)0.0055 (14)
C150.051 (2)0.046 (2)0.0464 (18)0.0243 (16)0.0104 (15)0.0115 (15)
C160.0425 (18)0.0320 (17)0.069 (2)0.0157 (15)0.0108 (16)0.0068 (15)
C170.0395 (18)0.0322 (16)0.0538 (19)0.0165 (14)−0.0031 (14)−0.0018 (14)
C180.0354 (16)0.0291 (15)0.0369 (15)0.0182 (13)−0.0024 (13)−0.0020 (12)
C190.0321 (16)0.0315 (15)0.0383 (16)0.0197 (13)−0.0019 (12)−0.0035 (12)
C200.0346 (16)0.0288 (15)0.0370 (16)0.0178 (13)−0.0026 (12)−0.0039 (12)
C210.0344 (16)0.0452 (18)0.0452 (18)0.0246 (15)−0.0037 (14)−0.0045 (14)
C220.050 (2)0.055 (2)0.0356 (17)0.0298 (17)−0.0023 (14)−0.0059 (14)
C230.0450 (19)0.0389 (18)0.0412 (18)0.0217 (15)−0.0112 (14)0.0008 (13)
C240.0398 (18)0.0508 (19)0.056 (2)0.0286 (16)−0.0092 (15)−0.0005 (15)
C250.0427 (18)0.0492 (19)0.0432 (18)0.0285 (15)−0.0001 (14)−0.0020 (14)
C260.0377 (18)0.0465 (19)0.0462 (19)0.0162 (14)0.0011 (14)−0.0031 (15)
C270.079 (3)0.108 (3)0.103 (3)0.043 (3)0.044 (2)0.021 (3)
N10.0292 (12)0.0280 (12)0.0332 (12)0.0143 (10)0.0022 (10)0.0007 (10)
O10.0462 (13)0.0353 (12)0.0571 (14)0.0238 (10)−0.0026 (10)−0.0004 (10)
O20.0512 (15)0.0940 (19)0.0727 (16)0.0455 (13)0.0179 (12)0.0238 (13)
O30.0493 (14)0.0684 (15)0.0484 (13)0.0260 (12)0.0151 (10)0.0127 (11)
Br10.0694 (3)0.0800 (3)0.0538 (2)0.0408 (2)−0.01750 (18)0.00658 (18)
C1—C21.406 (4)C15—C161.518 (4)
C1—C61.417 (4)C15—H15A0.9700
C1—C101.427 (4)C15—H15B0.9700
C2—C31.377 (4)C16—C171.515 (4)
C2—H20.9300C16—H16A0.9700
C3—C41.390 (6)C16—H16B0.9700
C3—H30.9300C17—C181.514 (4)
C4—C51.344 (5)C17—H17A0.9700
C4—H40.9300C17—H17B0.9700
C5—C61.418 (5)C18—N11.459 (3)
C5—H50.9300C18—C191.516 (3)
C6—C71.416 (5)C18—H180.9800
C7—C81.341 (4)C19—C201.511 (3)
C7—H70.9300C19—H190.9800
C8—C91.399 (4)C20—C211.380 (3)
C8—H80.9300C20—C251.387 (4)
C9—C101.361 (4)C21—C221.385 (4)
C9—O11.374 (3)C21—H210.9300
C10—C111.521 (4)C22—C231.368 (4)
C11—N11.479 (3)C22—H220.9300
C11—C121.558 (3)C23—C241.379 (4)
C11—H110.9800C23—Br11.890 (3)
C12—C261.521 (4)C24—C251.383 (4)
C12—C131.521 (4)C24—H240.9300
C12—C191.574 (3)C25—H250.9300
C13—O11.435 (3)C26—O21.193 (3)
C13—H13A0.9700C26—O31.324 (3)
C13—H13B0.9700C27—O31.461 (4)
C14—N11.450 (3)C27—H27A0.9600
C14—C151.498 (4)C27—H27B0.9600
C14—H14A0.9700C27—H27C0.9600
C14—H14B0.9700
C2—C1—C6117.4 (3)C16—C15—H15B109.5
C2—C1—C10123.2 (3)H15A—C15—H15B108.1
C6—C1—C10119.4 (3)C17—C16—C15109.6 (2)
C3—C2—C1121.0 (3)C17—C16—H16A109.7
C3—C2—H2119.5C15—C16—H16A109.7
C1—C2—H2119.5C17—C16—H16B109.7
C2—C3—C4121.1 (4)C15—C16—H16B109.7
C2—C3—H3119.4H16A—C16—H16B108.2
C4—C3—H3119.4C18—C17—C16110.6 (2)
C5—C4—C3119.4 (4)C18—C17—H17A109.5
C5—C4—H4120.3C16—C17—H17A109.5
C3—C4—H4120.3C18—C17—H17B109.5
C4—C5—C6121.5 (4)C16—C17—H17B109.5
C4—C5—H5119.2H17A—C17—H17B108.1
C6—C5—H5119.2N1—C18—C17111.3 (2)
C7—C6—C1118.7 (3)N1—C18—C19100.2 (2)
C7—C6—C5121.8 (3)C17—C18—C19116.0 (2)
C1—C6—C5119.5 (4)N1—C18—H18109.6
C8—C7—C6120.8 (3)C17—C18—H18109.6
C8—C7—H7119.6C19—C18—H18109.6
C6—C7—H7119.6C20—C19—C18118.2 (2)
C7—C8—C9120.0 (3)C20—C19—C12115.9 (2)
C7—C8—H8120.0C18—C19—C12102.47 (19)
C9—C8—H8120.0C20—C19—H19106.5
C10—C9—O1121.1 (2)C18—C19—H19106.5
C10—C9—C8122.4 (3)C12—C19—H19106.5
O1—C9—C8116.5 (3)C21—C20—C25117.6 (2)
C9—C10—C1118.1 (3)C21—C20—C19119.6 (2)
C9—C10—C11119.7 (2)C25—C20—C19122.8 (2)
C1—C10—C11121.7 (3)C20—C21—C22121.8 (3)
N1—C11—C10112.9 (2)C20—C21—H21119.1
N1—C11—C12103.10 (19)C22—C21—H21119.1
C10—C11—C12112.9 (2)C23—C22—C21118.9 (3)
N1—C11—H11109.2C23—C22—H22120.6
C10—C11—H11109.2C21—C22—H22120.6
C12—C11—H11109.2C22—C23—C24121.4 (2)
C26—C12—C13111.0 (2)C22—C23—Br1119.3 (2)
C26—C12—C11110.4 (2)C24—C23—Br1119.3 (2)
C13—C12—C11110.9 (2)C23—C24—C25118.5 (3)
C26—C12—C19107.9 (2)C23—C24—H24120.7
C13—C12—C19112.5 (2)C25—C24—H24120.7
C11—C12—C19103.98 (19)C24—C25—C20121.8 (3)
O1—C13—C12111.4 (2)C24—C25—H25119.1
O1—C13—H13A109.3C20—C25—H25119.1
C12—C13—H13A109.3O2—C26—O3122.9 (3)
O1—C13—H13B109.3O2—C26—C12124.7 (3)
C12—C13—H13B109.3O3—C26—C12112.4 (3)
H13A—C13—H13B108.0O3—C27—H27A109.5
N1—C14—C15110.7 (2)O3—C27—H27B109.5
N1—C14—H14A109.5H27A—C27—H27B109.5
C15—C14—H14A109.5O3—C27—H27C109.5
N1—C14—H14B109.5H27A—C27—H27C109.5
C15—C14—H14B109.5H27B—C27—H27C109.5
H14A—C14—H14B108.1C14—N1—C18114.1 (2)
C14—C15—C16110.8 (2)C14—N1—C11118.1 (2)
C14—C15—H15A109.5C18—N1—C11106.10 (18)
C16—C15—H15A109.5C9—O1—C13112.0 (2)
C14—C15—H15B109.5C26—O3—C27113.0 (3)
C6—C1—C2—C3−1.2 (5)N1—C18—C19—C1242.9 (2)
C10—C1—C2—C3178.6 (3)C17—C18—C19—C12162.8 (2)
C1—C2—C3—C4−0.9 (6)C26—C12—C19—C2090.7 (3)
C2—C3—C4—C51.6 (6)C13—C12—C19—C20−32.0 (3)
C3—C4—C5—C6−0.1 (6)C11—C12—C19—C20−152.0 (2)
C2—C1—C6—C7−178.6 (3)C26—C12—C19—C18−139.1 (2)
C10—C1—C6—C71.6 (4)C13—C12—C19—C1898.1 (2)
C2—C1—C6—C52.5 (4)C11—C12—C19—C18−21.9 (2)
C10—C1—C6—C5−177.3 (3)C18—C19—C20—C21153.2 (2)
C4—C5—C6—C7179.2 (3)C12—C19—C20—C21−84.7 (3)
C4—C5—C6—C1−1.9 (5)C18—C19—C20—C25−27.3 (4)
C1—C6—C7—C84.1 (5)C12—C19—C20—C2594.9 (3)
C5—C6—C7—C8−177.0 (3)C25—C20—C21—C22−1.7 (4)
C6—C7—C8—C9−4.6 (5)C19—C20—C21—C22177.9 (3)
C7—C8—C9—C10−0.8 (4)C20—C21—C22—C230.8 (4)
C7—C8—C9—O1178.3 (3)C21—C22—C23—C241.3 (4)
O1—C9—C10—C1−172.6 (2)C21—C22—C23—Br1−177.7 (2)
C8—C9—C10—C16.5 (4)C22—C23—C24—C25−2.5 (4)
O1—C9—C10—C1115.6 (4)Br1—C23—C24—C25176.5 (2)
C8—C9—C10—C11−165.3 (2)C23—C24—C25—C201.6 (4)
C2—C1—C10—C9173.5 (3)C21—C20—C25—C240.4 (4)
C6—C1—C10—C9−6.7 (4)C19—C20—C25—C24−179.1 (2)
C2—C1—C10—C11−14.9 (4)C13—C12—C26—O2−159.1 (3)
C6—C1—C10—C11164.9 (3)C11—C12—C26—O2−35.8 (4)
C9—C10—C11—N189.9 (3)C19—C12—C26—O277.2 (3)
C1—C10—C11—N1−81.6 (3)C13—C12—C26—O322.0 (3)
C9—C10—C11—C12−26.5 (3)C11—C12—C26—O3145.3 (2)
C1—C10—C11—C12162.0 (2)C19—C12—C26—O3−101.6 (3)
N1—C11—C12—C26108.5 (2)C15—C14—N1—C18−55.9 (3)
C10—C11—C12—C26−129.3 (2)C15—C14—N1—C11178.3 (2)
N1—C11—C12—C13−128.1 (2)C17—C18—N1—C1454.8 (3)
C10—C11—C12—C13−6.0 (3)C19—C18—N1—C14178.1 (2)
N1—C11—C12—C19−7.0 (2)C17—C18—N1—C11−173.3 (2)
C10—C11—C12—C19115.1 (2)C19—C18—N1—C11−50.0 (2)
C26—C12—C13—O1172.0 (2)C10—C11—N1—C1442.9 (3)
C11—C12—C13—O148.9 (3)C12—C11—N1—C14165.0 (2)
C19—C12—C13—O1−67.0 (3)C10—C11—N1—C18−86.7 (2)
N1—C14—C15—C1656.3 (3)C12—C11—N1—C1835.5 (2)
C14—C15—C16—C17−56.7 (3)C10—C9—O1—C1330.1 (3)
C15—C16—C17—C1855.2 (3)C8—C9—O1—C13−149.1 (2)
C16—C17—C18—N1−53.9 (3)C12—C13—O1—C9−63.2 (3)
C16—C17—C18—C19−167.6 (2)O2—C26—O3—C271.2 (4)
N1—C18—C19—C20171.6 (2)C12—C26—O3—C27−180.0 (3)
C17—C18—C19—C20−68.5 (3)
D—H···AD—HH···AD···AD—H···A
C15—H15B···Br1i0.972.733.588 (3)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C15—H15B⋯Br1i0.972.733.588 (3)147

Symmetry code: (i) .

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Journal:  Bioorg Med Chem       Date:  2005-05-02       Impact factor: 3.641

3.  Methyl 1-methyl-3-phenyl-1,2,3,3a,4,9b-hexa-hydro-benzo[f]chromeno[4,3-b]pyrrole-3a-carboxyl-ate.

Authors:  B Gunasekaran; S Kathiravan; R Raghunathan; V Renuga; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-10

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5.  Phospholipid microspheres: a novel delivery mode for targeting antileishmanial agent in experimental leishmaniasis.

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Journal:  J Drug Target       Date:  2003-02       Impact factor: 5.121

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Authors:  Lise-Lotte Gundersen; Ayele H Negussie; Frode Rise; Ole Benny ØStby
Journal:  Arch Pharm (Weinheim)       Date:  2003-06       Impact factor: 3.751

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
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1.  Methyl 9-p-tolyl-8a,9,9a,10,11,12,13,14a-octa-hydro-8H-benzo[f]chromeno[3,4-b]indolizine-8a-carboxyl-ate.

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