| Literature DB >> 21577574 |
Hoong-Kun Fun, Wei-Ching Liew, B Chandrakantha, Arun M Isloor.
Abstract
In the title compound, C(16)H(11)F(4)N(3)S, the dihedral angles between the thia-diazole ring and the difluorobenzyl rings are 81.95 (7) and 81.96 (7)°, whereas the dihedral angle between the difluorobenzyl rings is 11.41 (7)°. In the crystal structure, C-H⋯N and C-H⋯F inter-actions link the mol-ecules into two-dimensional arrays parallel to the bc plane.Entities:
Year: 2009 PMID: 21577574 PMCID: PMC2970007 DOI: 10.1107/S1600536809031675
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H11F4N3S | |
| Orthorhombic, | Mo |
| Hall symbol: P 2c -2ac | Cell parameters from 9387 reflections |
| θ = 2.9–33.7° | |
| µ = 0.26 mm−1 | |
| Block, pale-yellow | |
| 0.46 × 0.33 × 0.14 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 4796 independent reflections |
| Radiation source: fine-focus sealed tube | 4299 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.5°, θmin = 2.5° |
| Absorption correction: multi-scan ( | |
| 17980 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 4796 reflections | Δρmax = 0.23 e Å−3 |
| 218 parameters | Δρmin = −0.26 e Å−3 |
| 1 restraint | Absolute structure: Flack (1983), 1935 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.20 (5) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.794704 (10) | 0.52906 (6) | −0.01577 (5) | 0.02346 (8) | |
| F1 | 0.79830 (2) | 0.37874 (17) | 0.48808 (16) | 0.0338 (2) | |
| F2 | 0.94005 (2) | 0.27091 (16) | 0.53340 (11) | 0.0261 (2) | |
| F3 | 0.92412 (3) | −0.07230 (15) | 0.24104 (14) | 0.0264 (2) | |
| F4 | 0.91204 (3) | 0.60294 (17) | −0.07755 (14) | 0.0338 (2) | |
| N1 | 0.78098 (4) | 0.8994 (2) | 0.14916 (18) | 0.0236 (3) | |
| N2 | 0.81456 (4) | 0.8012 (2) | 0.22916 (17) | 0.0209 (2) | |
| N3 | 0.85771 (4) | 0.4805 (2) | 0.21110 (16) | 0.0190 (2) | |
| C1 | 0.76794 (4) | 0.7789 (3) | 0.0214 (2) | 0.0249 (3) | |
| H1A | 0.7458 | 0.8235 | −0.0455 | 0.030* | |
| C2 | 0.82545 (4) | 0.6085 (2) | 0.15657 (18) | 0.0160 (2) | |
| C3 | 0.87577 (4) | 0.5273 (2) | 0.3784 (2) | 0.0187 (3) | |
| H3A | 0.8637 | 0.6655 | 0.4249 | 0.022* | |
| H3B | 0.9049 | 0.5537 | 0.3647 | 0.022* | |
| C4 | 0.86929 (4) | 0.3330 (2) | 0.50333 (18) | 0.0162 (2) | |
| C5 | 0.83046 (4) | 0.2629 (3) | 0.5541 (2) | 0.0213 (3) | |
| C6 | 0.82293 (5) | 0.0864 (3) | 0.6657 (2) | 0.0242 (3) | |
| H6A | 0.7963 | 0.0468 | 0.6955 | 0.029* | |
| C7 | 0.85629 (5) | −0.0312 (3) | 0.7328 (2) | 0.0238 (3) | |
| H7A | 0.8520 | −0.1523 | 0.8078 | 0.029* | |
| C8 | 0.89596 (5) | 0.0308 (3) | 0.68863 (19) | 0.0220 (3) | |
| H8A | 0.9184 | −0.0466 | 0.7334 | 0.026* | |
| C9 | 0.90109 (4) | 0.2105 (2) | 0.57631 (19) | 0.0181 (3) | |
| C10 | 0.87024 (4) | 0.2743 (2) | 0.1207 (2) | 0.0194 (3) | |
| H10A | 0.8557 | 0.2656 | 0.0126 | 0.023* | |
| H10B | 0.8627 | 0.1417 | 0.1882 | 0.023* | |
| C11 | 0.91598 (4) | 0.2685 (2) | 0.08670 (19) | 0.0175 (3) | |
| C12 | 0.94120 (4) | 0.0961 (2) | 0.14585 (18) | 0.0184 (3) | |
| C13 | 0.98273 (5) | 0.0831 (3) | 0.1130 (2) | 0.0234 (3) | |
| H13A | 0.9984 | −0.0374 | 0.1548 | 0.028* | |
| C14 | 1.00032 (4) | 0.2553 (3) | 0.0158 (2) | 0.0260 (3) | |
| H14A | 1.0282 | 0.2512 | −0.0072 | 0.031* | |
| C15 | 0.97688 (5) | 0.4331 (3) | −0.0475 (2) | 0.0272 (3) | |
| H15A | 0.9886 | 0.5489 | −0.1125 | 0.033* | |
| C16 | 0.93555 (4) | 0.4336 (2) | −0.0113 (2) | 0.0218 (3) |
| S1 | 0.01673 (15) | 0.03179 (18) | 0.02187 (15) | 0.00300 (13) | −0.00547 (14) | −0.00224 (18) |
| F1 | 0.0139 (4) | 0.0423 (5) | 0.0451 (5) | 0.0051 (4) | −0.0022 (4) | 0.0137 (6) |
| F2 | 0.0124 (4) | 0.0360 (5) | 0.0298 (5) | 0.0007 (3) | −0.0012 (3) | 0.0101 (4) |
| F3 | 0.0237 (4) | 0.0208 (4) | 0.0345 (5) | 0.0013 (3) | 0.0037 (4) | 0.0108 (4) |
| F4 | 0.0341 (5) | 0.0282 (5) | 0.0390 (5) | 0.0040 (4) | −0.0034 (4) | 0.0175 (4) |
| N1 | 0.0206 (6) | 0.0248 (6) | 0.0253 (6) | 0.0062 (5) | −0.0010 (5) | 0.0065 (5) |
| N2 | 0.0187 (6) | 0.0213 (6) | 0.0226 (6) | 0.0044 (4) | −0.0020 (5) | 0.0032 (5) |
| N3 | 0.0181 (5) | 0.0192 (5) | 0.0196 (5) | 0.0039 (4) | −0.0049 (4) | −0.0013 (5) |
| C1 | 0.0165 (6) | 0.0339 (8) | 0.0243 (7) | 0.0059 (6) | −0.0018 (5) | 0.0044 (6) |
| C2 | 0.0127 (6) | 0.0192 (6) | 0.0161 (5) | −0.0015 (5) | −0.0012 (4) | 0.0041 (5) |
| C3 | 0.0192 (6) | 0.0172 (6) | 0.0198 (6) | −0.0007 (5) | −0.0054 (5) | 0.0006 (5) |
| C4 | 0.0132 (5) | 0.0177 (6) | 0.0177 (6) | 0.0003 (4) | −0.0022 (5) | 0.0000 (5) |
| C5 | 0.0150 (6) | 0.0230 (7) | 0.0258 (7) | 0.0015 (5) | −0.0015 (5) | 0.0003 (6) |
| C6 | 0.0199 (7) | 0.0277 (8) | 0.0250 (7) | −0.0054 (6) | 0.0019 (5) | 0.0003 (6) |
| C7 | 0.0296 (8) | 0.0218 (7) | 0.0200 (7) | −0.0022 (6) | 0.0024 (6) | 0.0032 (6) |
| C8 | 0.0220 (7) | 0.0233 (7) | 0.0206 (7) | 0.0039 (6) | −0.0031 (5) | 0.0030 (6) |
| C9 | 0.0141 (6) | 0.0208 (6) | 0.0193 (6) | −0.0005 (5) | −0.0004 (5) | 0.0001 (5) |
| C10 | 0.0167 (6) | 0.0180 (6) | 0.0235 (7) | 0.0011 (5) | −0.0027 (5) | −0.0023 (6) |
| C11 | 0.0167 (6) | 0.0176 (6) | 0.0181 (6) | 0.0001 (5) | −0.0012 (5) | 0.0001 (5) |
| C12 | 0.0203 (6) | 0.0164 (6) | 0.0185 (6) | −0.0009 (5) | 0.0014 (5) | 0.0005 (5) |
| C13 | 0.0201 (7) | 0.0243 (7) | 0.0259 (7) | 0.0049 (5) | 0.0009 (5) | −0.0005 (6) |
| C14 | 0.0184 (6) | 0.0345 (8) | 0.0252 (8) | −0.0026 (6) | 0.0044 (5) | −0.0024 (7) |
| C15 | 0.0278 (8) | 0.0299 (8) | 0.0238 (8) | −0.0075 (6) | 0.0042 (6) | 0.0053 (6) |
| C16 | 0.0252 (7) | 0.0191 (6) | 0.0211 (6) | 0.0009 (5) | −0.0027 (6) | 0.0058 (7) |
| S1—C1 | 1.7278 (16) | C6—C7 | 1.392 (2) |
| S1—C2 | 1.7431 (14) | C6—H6A | 0.9300 |
| F1—C5 | 1.3527 (16) | C7—C8 | 1.389 (2) |
| F2—C9 | 1.3630 (15) | C7—H7A | 0.9300 |
| F3—C12 | 1.3548 (17) | C8—C9 | 1.380 (2) |
| F4—C16 | 1.3566 (16) | C8—H8A | 0.9300 |
| N1—C1 | 1.295 (2) | C10—C11 | 1.5179 (19) |
| N1—N2 | 1.3872 (16) | C10—H10A | 0.9700 |
| N2—C2 | 1.3114 (19) | C10—H10B | 0.9700 |
| N3—C2 | 1.3613 (17) | C11—C12 | 1.3824 (19) |
| N3—C10 | 1.4570 (18) | C11—C16 | 1.388 (2) |
| N3—C3 | 1.4598 (19) | C12—C13 | 1.383 (2) |
| C1—H1A | 0.9300 | C13—C14 | 1.387 (2) |
| C3—C4 | 1.514 (2) | C13—H13A | 0.9300 |
| C3—H3A | 0.9700 | C14—C15 | 1.383 (2) |
| C3—H3B | 0.9700 | C14—H14A | 0.9300 |
| C4—C9 | 1.3848 (18) | C15—C16 | 1.380 (2) |
| C4—C5 | 1.3906 (19) | C15—H15A | 0.9300 |
| C5—C6 | 1.374 (2) | ||
| C1—S1—C2 | 86.35 (7) | C9—C8—C7 | 118.05 (14) |
| C1—N1—N2 | 112.47 (13) | C9—C8—H8A | 121.0 |
| C2—N2—N1 | 112.07 (13) | C7—C8—H8A | 121.0 |
| C2—N3—C10 | 121.42 (12) | F2—C9—C8 | 117.87 (12) |
| C2—N3—C3 | 119.33 (12) | F2—C9—C4 | 117.72 (12) |
| C10—N3—C3 | 118.42 (11) | C8—C9—C4 | 124.41 (13) |
| N1—C1—S1 | 115.07 (11) | N3—C10—C11 | 112.32 (11) |
| N1—C1—H1A | 122.5 | N3—C10—H10A | 109.1 |
| S1—C1—H1A | 122.5 | C11—C10—H10A | 109.1 |
| N2—C2—N3 | 123.20 (13) | N3—C10—H10B | 109.1 |
| N2—C2—S1 | 114.03 (10) | C11—C10—H10B | 109.1 |
| N3—C2—S1 | 122.77 (11) | H10A—C10—H10B | 107.9 |
| N3—C3—C4 | 112.33 (11) | C12—C11—C16 | 114.68 (12) |
| N3—C3—H3A | 109.1 | C12—C11—C10 | 122.98 (12) |
| C4—C3—H3A | 109.1 | C16—C11—C10 | 122.31 (13) |
| N3—C3—H3B | 109.1 | F3—C12—C11 | 117.97 (12) |
| C4—C3—H3B | 109.1 | F3—C12—C13 | 117.77 (13) |
| H3A—C3—H3B | 107.9 | C11—C12—C13 | 124.25 (13) |
| C9—C4—C5 | 114.46 (13) | C12—C13—C14 | 117.94 (14) |
| C9—C4—C3 | 123.33 (11) | C12—C13—H13A | 121.0 |
| C5—C4—C3 | 122.21 (12) | C14—C13—H13A | 121.0 |
| F1—C5—C6 | 118.65 (13) | C15—C14—C13 | 120.85 (14) |
| F1—C5—C4 | 116.87 (13) | C15—C14—H14A | 119.6 |
| C6—C5—C4 | 124.48 (14) | C13—C14—H14A | 119.6 |
| C5—C6—C7 | 118.08 (14) | C16—C15—C14 | 118.03 (14) |
| C5—C6—H6A | 121.0 | C16—C15—H15A | 121.0 |
| C7—C6—H6A | 121.0 | C14—C15—H15A | 121.0 |
| C8—C7—C6 | 120.51 (14) | F4—C16—C15 | 118.49 (13) |
| C8—C7—H7A | 119.7 | F4—C16—C11 | 117.26 (12) |
| C6—C7—H7A | 119.7 | C15—C16—C11 | 124.24 (13) |
| C1—N1—N2—C2 | 0.11 (18) | C7—C8—C9—C4 | −0.5 (2) |
| N2—N1—C1—S1 | 0.64 (17) | C5—C4—C9—F2 | −179.53 (12) |
| C2—S1—C1—N1 | −0.89 (12) | C3—C4—C9—F2 | 0.5 (2) |
| N1—N2—C2—N3 | 179.58 (13) | C5—C4—C9—C8 | 0.9 (2) |
| N1—N2—C2—S1 | −0.80 (15) | C3—C4—C9—C8 | −179.07 (14) |
| C10—N3—C2—N2 | −176.38 (13) | C2—N3—C10—C11 | 131.34 (14) |
| C3—N3—C2—N2 | 14.2 (2) | C3—N3—C10—C11 | −59.13 (17) |
| C10—N3—C2—S1 | 4.04 (19) | N3—C10—C11—C12 | 121.31 (15) |
| C3—N3—C2—S1 | −165.40 (10) | N3—C10—C11—C16 | −60.72 (19) |
| C1—S1—C2—N2 | 0.94 (11) | C16—C11—C12—F3 | −179.37 (13) |
| C1—S1—C2—N3 | −179.44 (13) | C10—C11—C12—F3 | −1.3 (2) |
| C2—N3—C3—C4 | 113.44 (14) | C16—C11—C12—C13 | 0.1 (2) |
| C10—N3—C3—C4 | −56.32 (16) | C10—C11—C12—C13 | 178.17 (14) |
| N3—C3—C4—C9 | 118.26 (15) | F3—C12—C13—C14 | −179.93 (14) |
| N3—C3—C4—C5 | −61.69 (18) | C11—C12—C13—C14 | 0.6 (2) |
| C9—C4—C5—F1 | 179.22 (13) | C12—C13—C14—C15 | −0.6 (2) |
| C3—C4—C5—F1 | −0.8 (2) | C13—C14—C15—C16 | −0.1 (2) |
| C9—C4—C5—C6 | −0.6 (2) | C14—C15—C16—F4 | −177.79 (14) |
| C3—C4—C5—C6 | 179.38 (14) | C14—C15—C16—C11 | 0.9 (2) |
| F1—C5—C6—C7 | −179.92 (14) | C12—C11—C16—F4 | 177.85 (13) |
| C4—C5—C6—C7 | −0.1 (2) | C10—C11—C16—F4 | −0.3 (2) |
| C5—C6—C7—C8 | 0.6 (2) | C12—C11—C16—C15 | −0.9 (2) |
| C6—C7—C8—C9 | −0.3 (2) | C10—C11—C16—C15 | −178.99 (15) |
| C7—C8—C9—F2 | 179.95 (13) |
| H··· | ||||
| C1—H1A···N1i | 0.93 | 2.58 | 3.392 (2) | 146 |
| C3—H3A···N2 | 0.97 | 2.36 | 2.8155 (18) | 108 |
| C3—H3B···F2 | 0.97 | 2.41 | 2.8508 (15) | 107 |
| C3—H3B···F3ii | 0.97 | 2.47 | 3.0226 (16) | 116 |
| C8—H8A···F4iii | 0.93 | 2.54 | 3.144 (2) | 123 |
| C10—H10A···S1 | 0.97 | 2.53 | 3.0738 (14) | 115 |
| C10—H10B···F3 | 0.97 | 2.40 | 2.8453 (16) | 107 |
| C10—H10B···N2iv | 0.97 | 2.56 | 3.4191 (17) | 148 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C1—H1 | 0.93 | 2.58 | 3.392 (2) | 146 |
| C3—H3 | 0.97 | 2.47 | 3.0226 (16) | 116 |
| C8—H8 | 0.93 | 2.54 | 3.144 (2) | 123 |
| C10—H10 | 0.97 | 2.56 | 3.4191 (17) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .