Literature DB >> 21566728

Comparing tumor rates in current and historical control groups in rodent cancer bioassays.

Gregg E Dinse1, Shyamal D Peddada.   

Abstract

When evaluating carcinogenicity, tumor rates from the current study are informally assessed within the context of relevant historical control tumor rates. Current rates outside the range of historical rates raise concerns. We propose a statistical procedure that formally compares tumor rates in current and historical control groups. We use a normal approximation for the null distribution of the proposed test when there are at least 5 historical control groups and the average tumor rate is above 0.5%; otherwise, we apply standard bootstrap techniques. For comparison purposes, we show that formally basing decisions on the range of historical control rates would yield unusually high false positive rates. That is, a range-based decision rule would not maintain the nominal 5% significance level and could produce Type I error rates as high as 67%. In other cases, the power could go to zero. The proposed test, however, controls Type I errors while adjusting for survival and extra variability among the historical studies. We illustrate the methods with data from a study of benzophenone. Compared to a range-based decision rule, the proposed test has several important advantages, including operating at the specified level and being applicable with as few as one historical study.

Entities:  

Year:  2011        PMID: 21566728      PMCID: PMC3091821          DOI: 10.1198/sbr.2010.09044

Source DB:  PubMed          Journal:  Stat Biopharm Res        ISSN: 1946-6315            Impact factor:   1.452


  9 in total

1.  Tests for order restrictions in binary data.

Authors:  S D Peddada; K E Prescott; M Conaway
Journal:  Biometrics       Date:  2001-12       Impact factor: 2.571

Review 2.  Best practices for use of historical control data of proliferative rodent lesions.

Authors:  Charlotte Keenan; Susan Elmore; Sabine Francke-Carroll; Ramon Kemp; Roy Kerlin; Shyamal Peddada; John Pletcher; Matthias Rinke; Stephen Peter Schmidt; Ian Taylor; Douglas C Wolf
Journal:  Toxicol Pathol       Date:  2009-05-19       Impact factor: 1.902

3.  Potential for a global historical control database for proliferative rodent lesions.

Authors:  Charlotte Keenan; Susan Elmore; Sabine Francke-Carroll; Roy Kerlin; Shyamal Peddada; John Pletcher; Matthias Rinke; Stephen Peter Schmidt; Ian Taylor; Douglas C Wolf
Journal:  Toxicol Pathol       Date:  2009-08       Impact factor: 1.902

4.  Use of historical controls in time-adjusted trend tests for carcinogenicity.

Authors:  J G Ibrahim; L M Ryan
Journal:  Biometrics       Date:  1996-12       Impact factor: 2.571

5.  Incorporating Historical Control Data When Comparing Tumor Incidence Rates.

Authors:  Shyamal D Peddada; Gregg E Dinse; Grace E Kissling
Journal:  J Am Stat Assoc       Date:  2007-01-01       Impact factor: 5.033

6.  Ratio estimates, the delta method, and quantal response tests for increased carcinogenicity.

Authors:  G S Bieler; R L Williams
Journal:  Biometrics       Date:  1993-09       Impact factor: 2.571

7.  The use of historical control information in testing for a trend in Poisson means.

Authors:  R E Tarone
Journal:  Biometrics       Date:  1982-06       Impact factor: 2.571

8.  Points to consider on the statistical analysis of rodent cancer bioassay data when incorporating historical control data.

Authors:  Susan A Elmore; Shyamal D Peddada
Journal:  Toxicol Pathol       Date:  2009-06-10       Impact factor: 1.902

9.  Effects of treatment-induced mortality and tumor-induced mortality on tests for carcinogenicity in small samples.

Authors:  A J Bailer; C J Portier
Journal:  Biometrics       Date:  1988-06       Impact factor: 2.571

  9 in total
  1 in total

Review 1.  Glyphosate toxicity and carcinogenicity: a review of the scientific basis of the European Union assessment and its differences with IARC.

Authors:  Jose V Tarazona; Daniele Court-Marques; Manuela Tiramani; Hermine Reich; Rudolf Pfeil; Frederique Istace; Federica Crivellente
Journal:  Arch Toxicol       Date:  2017-04-03       Impact factor: 5.153

  1 in total

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