Literature DB >> 21565700

Atomic model of CPV reveals the mechanism used by this single-shelled virus to economically carry out functions conserved in multishelled reoviruses.

Xuekui Yu1, Peng Ge, Jiansen Jiang, Ivo Atanasov, Z Hong Zhou.   

Abstract

Unlike the multishelled viruses in the Reoviridae, cytoplasmic polyhedrosis virus (CPV) is single shelled, yet stable and fully capable of carrying out functions conserved within Reoviridae. Here, we report a 3.1 Å resolution cryo electron microscopy structure of CPV and derive its atomic model, consisting of 60 turret proteins (TPs), 120 each of capsid shell proteins (CSPs) and large protrusion proteins (LPPs). Two unique segments of CSP contribute to CPV's stability: an inserted protrusion domain interacting with neighboring proteins, and an N-anchor tying up CSPs together through strong interactions such as β sheet augmentation. Without the need to interact with outer shell proteins, LPP retains only the N-terminal two-third region containing a conserved helix-barrel core and interacts exclusively with CSP. TP is also simplified, containing only domains involved in RNA capping. Our results illustrate how CPV proteins have evolved in a coordinative manner to economically carry out their conserved functions.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21565700      PMCID: PMC3405907          DOI: 10.1016/j.str.2011.03.003

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  32 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Structure of the reovirus core at 3.6 A resolution.

Authors:  K M Reinisch; M L Nibert; S C Harrison
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

3.  Electron cryomicroscopy and bioinformatics suggest protein fold models for rice dwarf virus.

Authors:  Z H Zhou; M L Baker; W Jiang; M Dougherty; J Jakana; G Dong; G Lu; W Chiu
Journal:  Nat Struct Biol       Date:  2001-10

4.  IMIRS: a high-resolution 3D reconstruction package integrated with a relational image database.

Authors:  Yuyao Liang; Eugene Y Ke; Z Hong Zhou
Journal:  J Struct Biol       Date:  2002-03       Impact factor: 2.867

5.  Accurate determination of local defocus and specimen tilt in electron microscopy.

Authors:  Joseph A Mindell; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2003-06       Impact factor: 2.867

6.  Assembly into single-shelled virus-like particles by major capsid protein VP1 encoded by genome segment S1 of Bombyx mori cypovirus 1.

Authors:  Kyoji Hagiwara; Hisashi Naitow
Journal:  J Gen Virol       Date:  2003-09       Impact factor: 3.891

7.  Cytoplasmic polyhedrosis virus structure at 8 A by electron cryomicroscopy: structural basis of capsid stability and mRNA processing regulation.

Authors:  Z Hong Zhou; Hong Zhang; Joanita Jakana; Xing-Ying Lu; Jing-Qiang Zhang
Journal:  Structure       Date:  2003-06       Impact factor: 5.006

8.  Electron tomography reveals polyhedrin binding and existence of both empty and full cytoplasmic polyhedrosis virus particles inside infectious polyhedra.

Authors:  Justin Chen; Jingchen Sun; Ivo Atanasov; Sergey Ryazantsev; Z Hong Zhou
Journal:  J Virol       Date:  2011-04-06       Impact factor: 5.103

9.  Molecular interactions and viral stability revealed by structural analyses of chemically treated cypovirus capsids.

Authors:  Hong Zhang; Xue-Kui Yu; Xing-Ying Lu; Jing-Qiang Zhang; Z Hong Zhou
Journal:  Virology       Date:  2002-06-20       Impact factor: 3.616

Review 10.  Mechanism of genome transcription in segmented dsRNA viruses.

Authors:  J A Lawton; M K Estes; B V Prasad
Journal:  Adv Virus Res       Date:  2000       Impact factor: 9.937

View more
  29 in total

1.  Cryo-EM structure of a transcribing cypovirus.

Authors:  Chongwen Yang; Gang Ji; Hongrong Liu; Kai Zhang; Guangqiao Liu; Fei Sun; Ping Zhu; Lingpeng Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-06       Impact factor: 11.205

2.  Cypovirus capsid protein VP5 has nucleoside triphosphatase activity.

Authors:  Jie Yang; Qi Qian; Teng-Feng Li; Xueli Yang; Sok Jin Won; Xi Zhou
Journal:  Virol Sin       Date:  2017-08       Impact factor: 4.327

Review 3.  Problems in obtaining perfect images by single-particle electron cryomicroscopy of biological structures in amorphous ice.

Authors:  Richard Henderson; Greg McMullan
Journal:  Microscopy (Oxf)       Date:  2013-01-04       Impact factor: 1.571

4.  In Situ Structures of the Polymerase Complex and RNA Genome Show How Aquareovirus Transcription Machineries Respond to Uncoating.

Authors:  Ke Ding; Lisa Nguyen; Z Hong Zhou
Journal:  J Virol       Date:  2018-10-12       Impact factor: 5.103

5.  Single particle cryo-electron microscopy and 3-D reconstruction of viruses.

Authors:  Fei Guo; Wen Jiang
Journal:  Methods Mol Biol       Date:  2014

6.  Intensity-based skeletonization of CryoEM gray-scale images using a true segmentation-free algorithm.

Authors:  Kamal Al Nasr; Chunmei Liu; Mugizi Rwebangira; Legand Burge; Jing He
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2013 Sep-Oct       Impact factor: 3.710

Review 7.  Limiting factors in atomic resolution cryo electron microscopy: no simple tricks.

Authors:  Xing Zhang; Z Hong Zhou
Journal:  J Struct Biol       Date:  2011-05-24       Impact factor: 2.867

Review 8.  Single-Particle Cryo-EM at Crystallographic Resolution.

Authors:  Yifan Cheng
Journal:  Cell       Date:  2015-04-23       Impact factor: 41.582

9.  Seeing engineered loops in a gene delivery vehicle by cryoEM.

Authors:  Z Hong Zhou
Journal:  Structure       Date:  2012-08-08       Impact factor: 5.006

10.  Three-dimensional reconstruction of icosahedral particles from single micrographs in real time at the microscope.

Authors:  Giovanni Cardone; Xiaodong Yan; Robert S Sinkovits; Jinghua Tang; Timothy S Baker
Journal:  J Struct Biol       Date:  2013-07-25       Impact factor: 2.867

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.