Literature DB >> 21564976

Testing plant barcoding in a sister species complex of pantropical Acacia (Mimosoideae, Fabaceae).

Newmaster Steven G1, Ragupathy Subramanyam.   

Abstract

Acacia species are quite difficult to differentiate using morphological characters. Routine identification of Acacia samples is important in order to distinguish invasive species from rare species or those of economic importance, particularly in the forest industry. The genus Acacia is quite abundant and diverse comprising approximately 1355 species, which is currently divided into three subgenera: subg. Acacia (c. 161 species), subg. Aculiferum (c. 235 species), and subg. Phyllodineae (c. 960 species). It would be prudent to utilize DNA barcoding in the accurate and efficient identification of acacias. The objective of this research is to test barcoding in discriminating multiple populations among a sister-species complex in pantropical Acacia subg. Acacia, across three continents. Based on previous research, we chose three cpDNA regions (rbcL, trnH-psbA and matK). Our results show that all three regions (rbcL, matK and trnH-psbA) can distinguish and support the newly proposed genera of Vachellia Wight & Arn. from Acacia Mill., discriminate sister species within either genera and differentiate biogeographical patterns among populations from India, Africa and Australia. A morphometric analysis confirmed the cryptic nature of these sister species and the limitations of a classification based on phenetic data. These results support the claim that DNA barcoding is a powerful tool for taxonomy and biogeography with utility for identifying cryptic species, biogeograhic patterns and resolving classifications at the rank of genera and species.
© 2009 Blackwell Publishing Ltd.

Entities:  

Year:  2009        PMID: 21564976     DOI: 10.1111/j.1755-0998.2009.02642.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  46 in total

1.  Identification of poisonous plants by DNA barcoding approach.

Authors:  Ilaria Bruni; Fabrizio De Mattia; Andrea Galimberti; Gabriele Galasso; Enrico Banfi; Maurizio Casiraghi; Massimo Labra
Journal:  Int J Legal Med       Date:  2010-03-31       Impact factor: 2.686

Review 2.  The changing epitome of species identification - DNA barcoding.

Authors:  M Ajmal Ali; Gábor Gyulai; Norbert Hidvégi; Balázs Kerti; Fahad M A Al Hemaid; Arun K Pandey; Joongku Lee
Journal:  Saudi J Biol Sci       Date:  2014-03-31       Impact factor: 4.219

3.  DNA barcoding as a valuable molecular tool for the certification of planting materials in bamboo.

Authors:  Suma Arun Dev; K Sijimol; P S Prathibha; V B Sreekumar; E M Muralidharan
Journal:  3 Biotech       Date:  2020-01-22       Impact factor: 2.406

4.  Molecular evidence for three genetic species of Dipteryx in the Peruvian Amazon.

Authors:  Carmen Garcia-Davila; David Aldana Gomero; Jean-François Renno; Rossana Diaz Soria; Gabriel Hidalgo Pizango; Gerardo Flores Llampazo; Diana Castro-Ruiz; Eduardo Mejia de Loayza; Carlos Angulo Chavez; Malte Mader; Niklas Tysklind; Kathelyn Paredes-Villanueva; Dennis Del Castillo Torres; Bernd Degen; Eurídice N Honorio Coronado
Journal:  Genetica       Date:  2019-12-19       Impact factor: 1.082

5.  Identification of medicinal Dendrobium species by phylogenetic analyses using matK and rbcL sequences.

Authors:  Haruka Asahina; Junichi Shinozaki; Kazuo Masuda; Yasujiro Morimitsu; Motoyoshi Satake
Journal:  J Nat Med       Date:  2010-02-06       Impact factor: 2.343

6.  Studying genetic variability of pomegranate (Punica granatum L.) based on chloroplast DNA and barcode genes.

Authors:  Zahra Hajiahmadi; Majid Talebi; Badraldin Ebrahim Sayed-Tabatabaei
Journal:  Mol Biotechnol       Date:  2013-11       Impact factor: 2.695

7.  Assessment of three plastid DNA barcode markers for identification of Clinacanthus nutans (Acanthaceae).

Authors:  Noor Zafirah Ismail; Hasni Arsad; Mohammed Razip Samian; Mohammad Razak Hamdan; Ahmad Sofiman Othman
Journal:  3 Biotech       Date:  2018-01-11       Impact factor: 2.406

8.  Molecular species identification with rich floristic sampling: DNA barcoding the pteridophyte flora of Japan.

Authors:  Atsushi Ebihara; Joel H Nitta; Motomi Ito
Journal:  PLoS One       Date:  2010-12-08       Impact factor: 3.240

9.  DNA barcoding of the Lemnaceae, a family of aquatic monocots.

Authors:  Wenqin Wang; Yongrui Wu; Yiheng Yan; Marina Ermakova; Randall Kerstetter; Joachim Messing
Journal:  BMC Plant Biol       Date:  2010-09-16       Impact factor: 4.215

10.  Ethnobotany genomics - discovery and innovation in a new era of exploratory research.

Authors:  Steven G Newmaster; Subramanyam Ragupathy
Journal:  J Ethnobiol Ethnomed       Date:  2010-01-26       Impact factor: 2.733

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