Literature DB >> 21560118

Transmembrane peptides used to investigate the homo-oligomeric interface and binding hotspot of latent membrane protein 1.

Deanne W Sammond1, Catherine Joce, Ryan Takeshita, Sarah E McQuate, Nilanjan Ghosh, Jennifer M Martin, Hang Yin.   

Abstract

Epstein-Barr virus (EBV), a human γ-herpesvirus, establishes lifelong infection by targeting the adaptive immune system of the host through memory B cells. Although normally benign, EBV contributes to lymphoid malignancies and lymphoproliferative syndromes in immunocompromised individuals. The viral oncoprotein latent membrane protein 1 (LMP-1) is essential for B lymphocyte immortalization by EBV. The constitutive signaling activity of LMP-1 is dependent on homo-oligomerization of its six-spanning hydrophobic transmembrane domain (TMD). However, the mechanism driving LMP-1 intermolecular interaction is poorly understood. Here, we show that the fifth transmembrane helix (TM5) of LMP-1 strongly self-associates, forming a homotrimeric complex mediated by a polar residue embedded in the membrane, D150. Replacement of this aspartic acid residue with alanine disrupts TM5 self-association in detergent micelles and bacterial cell membranes. A full-length LMP-1 variant harboring the D150A substitution is deficient in NFκB activation, supporting the key role of the fifth transmembrane helix in constitutive activation of signaling by this oncoprotein. 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 21560118      PMCID: PMC3192311          DOI: 10.1002/bip.21672

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  57 in total

1.  CD40 and LMP-1 both signal from lipid rafts but LMP-1 assembles a distinct, more efficient signaling complex.

Authors:  A Kaykas; K Worringer; B Sugden
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

2.  Asparagine-mediated self-association of a model transmembrane helix.

Authors:  C Choma; H Gratkowski; J D Lear; W F DeGrado
Journal:  Nat Struct Biol       Date:  2000-02

3.  Sequence specificity in the dimerization of transmembrane alpha-helices.

Authors:  M A Lemmon; J M Flanagan; H R Treutlein; J Zhang; D M Engelman
Journal:  Biochemistry       Date:  1992-12-29       Impact factor: 3.162

4.  Parallel synthesis of peptide libraries using microwave irradiation.

Authors:  Justin K Murray; Samuel H Gellman
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  TOXCAT: a measure of transmembrane helix association in a biological membrane.

Authors:  W P Russ; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-02-02       Impact factor: 11.205

6.  Epstein-Barr virus latent infection membrane protein alters the human B-lymphocyte phenotype: deletion of the amino terminus abolishes activity.

Authors:  D Wang; D Liebowitz; F Wang; C Gregory; A Rickinson; R Larson; T Springer; E Kieff
Journal:  J Virol       Date:  1988-11       Impact factor: 5.103

7.  Molecular dynamics simulation of unsaturated lipid bilayers at low hydration: parameterization and comparison with diffraction studies.

Authors:  S E Feller; D Yin; R W Pastor; A D MacKerell
Journal:  Biophys J       Date:  1997-11       Impact factor: 4.033

8.  Crystallographic analysis of CD40 recognition and signaling by human TRAF2.

Authors:  S M McWhirter; S S Pullen; J M Holton; J J Crute; M R Kehry; T Alber
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

9.  Detergent binding explains anomalous SDS-PAGE migration of membrane proteins.

Authors:  Arianna Rath; Mira Glibowicka; Vincent G Nadeau; Gong Chen; Charles M Deber
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

10.  Polar residues in transmembrane helices can decrease electrophoretic mobility in polyacrylamide gels without causing helix dimerization.

Authors:  William F Walkenhorst; Mikhail Merzlyakov; Kalina Hristova; William C Wimley
Journal:  Biochim Biophys Acta       Date:  2009-03-02
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  9 in total

1.  Targeting the lateral interactions of transmembrane domain 5 of Epstein-Barr virus latent membrane protein 1.

Authors:  Xiaohui Wang; Jonel P Saludes; Tina X Zhao; Adam Csakai; Zeno Fiorini; Sherry A Chavez; Jing Li; Gui-in Lee; Krisztina Varga; Hang Yin
Journal:  Biochim Biophys Acta       Date:  2012-05-17

2.  Transmembrane domain oligomerization propensity determined by ToxR assay.

Authors:  Catherine Joce; Alyssa Wiener; Hang Yin
Journal:  J Vis Exp       Date:  2011-05-26       Impact factor: 1.355

3.  Multi-Tox: application of the ToxR-transcriptional reporter assay to the study of multi-pass protein transmembrane domain oligomerization.

Authors:  Catherine Joce; Alyssa A Wiener; Hang Yin
Journal:  Biochim Biophys Acta       Date:  2011-07-23

Review 4.  Drugging Membrane Protein Interactions.

Authors:  Hang Yin; Aaron D Flynn
Journal:  Annu Rev Biomed Eng       Date:  2016-02-05       Impact factor: 9.590

Review 5.  NF-κB and IRF7 pathway activation by Epstein-Barr virus Latent Membrane Protein 1.

Authors:  Ina Ersing; Katharina Bernhardt; Benjamin E Gewurz
Journal:  Viruses       Date:  2013-06-21       Impact factor: 5.048

6.  How human tumor viruses make use of autophagy.

Authors:  Zachary L Pratt; Bill Sugden
Journal:  Cells       Date:  2012-08-27       Impact factor: 6.600

7.  Repositioning antimicrobial agent pentamidine as a disruptor of the lateral interactions of transmembrane domain 5 of EBV latent membrane protein 1.

Authors:  Xiaohui Wang; Zeno Fiorini; Christina Smith; Yingning Zhang; Jing Li; Linda R Watkins; Hang Yin
Journal:  PLoS One       Date:  2012-10-19       Impact factor: 3.240

8.  Isolated Toll-like receptor transmembrane domains are capable of oligomerization.

Authors:  James I Godfroy; Mohammad Roostan; Yurii S Moroz; Ivan V Korendovych; Hang Yin
Journal:  PLoS One       Date:  2012-11-14       Impact factor: 3.240

9.  Targeting trimeric transmembrane domain 5 of oncogenic latent membrane protein 1 using a computationally designed peptide.

Authors:  Yibo Wang; Yinghua Peng; Bo Zhang; Xiaozheng Zhang; Hongyuan Li; Andrew J Wilson; Konstantin S Mineev; Xiaohui Wang
Journal:  Chem Sci       Date:  2019-06-27       Impact factor: 9.825

  9 in total

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