Literature DB >> 10655620

Asparagine-mediated self-association of a model transmembrane helix.

C Choma1, H Gratkowski, J D Lear, W F DeGrado.   

Abstract

In membrane proteins, the extent to which polarity, hydrogen bonding, and van der Waals packing interactions of the buried, internal residues direct protein folding and association of transmembrane segments is poorly understood. The energetics associated with these various interactions should differ substantially between membrane versus water-soluble proteins. To help evaluate these energetics, we have altered a water-soluble, two-stranded coiled-coil peptide to render its sequence soluble in membranes. The membrane-soluble peptide associates in a monomer-dimer-trimer equilibrium, in which the trimer predominates at the highest peptide/detergent ratios. The oligomers are stabilized by a buried Asn side chain. Mutation of this Asn to Val essentially eliminates oligomerization of the membrane-soluble peptide. Thus, within a membrane-like environment, interactions involving a polar Asn side chain provide a strong thermodynamic driving force for membrane helix association.

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Year:  2000        PMID: 10655620     DOI: 10.1038/72440

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  116 in total

1.  Polar side chains drive the association of model transmembrane peptides.

Authors:  H Gratkowski; J D Lear; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions.

Authors:  A Senes; I Ubarretxena-Belandia; D M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

3.  Oligomerization of the integrin alphaIIbbeta3: roles of the transmembrane and cytoplasmic domains.

Authors:  R Li; C R Babu; J D Lear; A J Wand; J S Bennett; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-16       Impact factor: 11.205

4.  Organization of model helical peptides in lipid bilayers: insight into the behavior of single-span protein transmembrane domains.

Authors:  Simon Sharpe; Kathryn R Barber; Chris W M Grant; David Goodyear; Michael R Morrow
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

5.  The interface of a membrane-spanning leucine zipper mapped by asparagine-scanning mutagenesis.

Authors:  Weiming Ruan; Eric Lindner; Dieter Langosch
Journal:  Protein Sci       Date:  2004-02       Impact factor: 6.725

Review 6.  How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles.

Authors:  William F DeGrado; Holly Gratkowski; James D Lear
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

7.  Cooperativity and specificity of association of a designed transmembrane peptide.

Authors:  Holly Gratkowski; Qing-Hong Dai; A Joshua Wand; William F DeGrado; James D Lear
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

8.  A model membrane protein for binding volatile anesthetics.

Authors:  Shixin Ye; Joseph Strzalka; Inna Y Churbanova; Songyan Zheng; Jonas S Johansson; J Kent Blasie
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

9.  Helical packing patterns in membrane and soluble proteins.

Authors:  Marina Gimpelev; Lucy R Forrest; Diana Murray; Barry Honig
Journal:  Biophys J       Date:  2004-10-01       Impact factor: 4.033

10.  A knowledge-based potential highlights unique features of membrane α-helical and β-barrel protein insertion and folding.

Authors:  Daniel Hsieh; Alexander Davis; Vikas Nanda
Journal:  Protein Sci       Date:  2011-11-23       Impact factor: 6.725

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