Literature DB >> 21556873

Carboxysomes: cyanobacterial RubisCO comes in small packages.

George S Espie1, Matthew S Kimber.   

Abstract

Cyanobacteria (as well as many chemoautotrophs) actively pump inorganic carbon (in the form of HCO(3)(-)) into the cytosol in order to enhance the overall efficiency of carbon fixation. The success of this approach is dependent upon the presence of carboxysomes-large, polyhedral, cytosolic bodies which sequester ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO) and carbonic anhydrase. Carboxysomes seem to function by allowing ready passage of HCO(3)(-) into the body, but hindering the escape of evolved CO(2), promoting the accumulation of CO(2) in the vicinity of RubisCO and, consequently, efficient carbon fixation. This selectivity is mediated by a thin shell of protein, which envelops the carboxysome's enzymatic core and uses narrow pores to control the passage of small molecules. In this review, we summarize recent advances in understanding the organization and functioning of these intriguing, and ecologically very important molecular machines.

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Year:  2011        PMID: 21556873     DOI: 10.1007/s11120-011-9656-y

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  65 in total

1.  Four novel genes required for optimal photoautotrophic growth of the cyanobacterium Synechocystis sp. strain PCC 6803 identified by in vitro transposon mutagenesis.

Authors:  Shulu Zhang; Susan M Laborde; Laurie K Frankel; Terry M Bricker
Journal:  J Bacteriol       Date:  2004-02       Impact factor: 3.490

2.  A gene homologous to chloroplast carbonic anhydrase (icfA) is essential to photosynthetic carbon dioxide fixation by Synechococcus PCC7942.

Authors:  H Fukuzawa; E Suzuki; Y Komukai; S Miyachi
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

3.  Identification and preliminary characterization of two cDNAs encoding unique carbonic anhydrases from the marine alga Emiliania huxleyi.

Authors:  Amelia R Soto; Hong Zheng; Dorinda Shoemaker; Jason Rodriguez; Betsy A Read; Thomas M Wahlund
Journal:  Appl Environ Microbiol       Date:  2006-08       Impact factor: 4.792

4.  Characterization of a mutant lacking carboxysomal carbonic anhydrase from the cyanobacterium Synechocystis PCC6803.

Authors:  Anthony K C So; Meryl John-McKay; George S Espie
Journal:  Planta       Date:  2002-01       Impact factor: 4.116

5.  The photorespiratory glycolate metabolism is essential for cyanobacteria and might have been conveyed endosymbiontically to plants.

Authors:  Marion Eisenhut; Wolfgang Ruth; Maya Haimovich; Hermann Bauwe; Aaron Kaplan; Martin Hagemann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-28       Impact factor: 11.205

6.  Two-dimensional crystals of carboxysome shell proteins recapitulate the hexagonal packing of three-dimensional crystals.

Authors:  Kelly A Dryden; Christopher S Crowley; Shiho Tanaka; Todd O Yeates; Mark Yeager
Journal:  Protein Sci       Date:  2009-12       Impact factor: 6.725

7.  A carbonic anhydrase from the archaeon Methanosarcina thermophila.

Authors:  B E Alber; J G Ferry
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

8.  The structure of isolated Synechococcus strain WH8102 carboxysomes as revealed by electron cryotomography.

Authors:  Cristina V Iancu; H Jane Ding; Dylan M Morris; D Prabha Dias; Arlene D Gonzales; Anthony Martino; Grant J Jensen
Journal:  J Mol Biol       Date:  2007-06-29       Impact factor: 5.469

9.  Halothiobacillus neapolitanus carboxysomes sequester heterologous and chimeric RubisCO species.

Authors:  Balaraj B Menon; Zhicheng Dou; Sabine Heinhorst; Jessup M Shively; Gordon C Cannon
Journal:  PLoS One       Date:  2008-10-30       Impact factor: 3.240

10.  Structural analysis of CsoS1A and the protein shell of the Halothiobacillus neapolitanus carboxysome.

Authors:  Yingssu Tsai; Michael R Sawaya; Gordon C Cannon; Fei Cai; Eric B Williams; Sabine Heinhorst; Cheryl A Kerfeld; Todd O Yeates
Journal:  PLoS Biol       Date:  2007-06       Impact factor: 8.029

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  33 in total

Review 1.  Improving carbon fixation pathways.

Authors:  Daniel C Ducat; Pamela A Silver
Journal:  Curr Opin Chem Biol       Date:  2012-05-29       Impact factor: 8.822

Review 2.  Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

3.  The complete genome of a cyanobacterium from a soda lake reveals the presence of the components of CO2-concentrating mechanism.

Authors:  Elena V Kupriyanova; Sung Mi Cho; Youn-Il Park; Natalia A Pronina; Dmitry A Los
Journal:  Photosynth Res       Date:  2016-02-23       Impact factor: 3.573

4.  Inorganic carbon utilization by aquatic photoautotrophs and potential usages of algal primary production.

Authors:  Yusuke Matsuda
Journal:  Photosynth Res       Date:  2011-09-10       Impact factor: 3.573

5.  Opposing effects of folding and assembly chaperones on evolvability of Rubisco.

Authors:  Paulo Durão; Harald Aigner; Péter Nagy; Oliver Mueller-Cajar; F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Nat Chem Biol       Date:  2015-01-05       Impact factor: 15.040

6.  A Complete Structural Inventory of the Mycobacterial Microcompartment Shell Proteins Constrains Models of Global Architecture and Transport.

Authors:  Evan Mallette; Matthew S Kimber
Journal:  J Biol Chem       Date:  2016-12-06       Impact factor: 5.157

7.  The small RbcS-like domains of the β-carboxysome structural protein CcmM bind RubisCO at a site distinct from that binding the RbcS subunit.

Authors:  Patrick Ryan; Taylor J B Forrester; Charles Wroblewski; Tristan M G Kenney; Elena N Kitova; John S Klassen; Matthew S Kimber
Journal:  J Biol Chem       Date:  2018-12-27       Impact factor: 5.157

8.  Can the cyanobacterial carbon-concentrating mechanism increase photosynthesis in crop species? A theoretical analysis.

Authors:  Justin M McGrath; Stephen P Long
Journal:  Plant Physiol       Date:  2014-02-18       Impact factor: 8.340

9.  Interactions and structural variability of β-carboxysomal shell protein CcmL.

Authors:  Thomas J Keeling; Bożena Samborska; Ryan W Demers; Matthew S Kimber
Journal:  Photosynth Res       Date:  2014-02-07       Impact factor: 3.573

10.  A PII-Like Protein Regulated by Bicarbonate: Structural and Biochemical Studies of the Carboxysome-Associated CPII Protein.

Authors:  Nicole M Wheatley; Kevin D Eden; Joanna Ngo; Justin S Rosinski; Michael R Sawaya; Duilio Cascio; Michael Collazo; Hamidreza Hoveida; Wayne L Hubbell; Todd O Yeates
Journal:  J Mol Biol       Date:  2016-07-25       Impact factor: 5.469

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