Literature DB >> 14729717

Four novel genes required for optimal photoautotrophic growth of the cyanobacterium Synechocystis sp. strain PCC 6803 identified by in vitro transposon mutagenesis.

Shulu Zhang1, Susan M Laborde, Laurie K Frankel, Terry M Bricker.   

Abstract

Four novel Synechocystis sp. strain PCC 6803 genes (sll1495, sll0804, slr1306, and slr1125) which encode hypothetical proteins were determined by transposon mutagenesis to be required for optimal photoautotrophic growth. Mutations were also recovered in ccmK4, a carboxysome coat protein homologue, and me, the decarboxylating NADP(+)-dependent malic enzyme. This is the first report that these known genes are required for optimal photoautotrophy.

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Year:  2004        PMID: 14729717      PMCID: PMC321504          DOI: 10.1128/JB.186.3.875-879.2004

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  13 in total

1.  Light regulation of type IV pilus-dependent motility by chemosensor-like elements in Synechocystis PCC6803.

Authors:  D Bhaya; A Takahashi; A R Grossman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-12       Impact factor: 11.205

2.  Rapid amplification and cloning of Tn5 flanking fragments by inverse PCR.

Authors:  G Huang; L Zhang; R G Birch
Journal:  Lett Appl Microbiol       Date:  2000-08       Impact factor: 2.858

3.  The structure and function of CP47 and CP43 in Photosystem II.

Authors:  Terry M Bricker; Laurie K Frankel
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

4.  Cyanobacterial signature genes.

Authors:  Kirt A Martin; Janet L Siefert; Sailaja Yerrapragada; Yue Lu; Thomas Z McNeill; Pedro A Moreno; George M Weinstock; William R Widger; George E Fox
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

Review 5.  Complete genome structure of the unicellular cyanobacterium Synechocystis sp. PCC6803.

Authors:  T Kaneko; S Tabata
Journal:  Plant Cell Physiol       Date:  1997-11       Impact factor: 4.927

6.  The structure and function of CPa-1 and CPa-2 in Photosystem II.

Authors:  T M Bricker
Journal:  Photosynth Res       Date:  1990-04       Impact factor: 3.573

7.  Recruitment of a foreign quinone into the A1 site of photosystem I. In vivo replacement of plastoquinone-9 by media-supplemented naphthoquinones in phylloquinone biosynthetic pathway mutants of Synechocystis sp. PCC 6803.

Authors:  T W Johnson; B Zybailov; A D Jones; R Bittl; S Zech; D Stehlik; J H Golbeck; P R Chitnis
Journal:  J Biol Chem       Date:  2001-07-24       Impact factor: 5.157

8.  Novel motility mutants of synechocystis strain PCC 6803 generated by in vitro transposon mutagenesis.

Authors:  D Bhaya; A Takahashi; P Shahi; A R Grossman
Journal:  J Bacteriol       Date:  2001-10       Impact factor: 3.490

9.  Metabolic flux analysis in Synechocystis using isotope distribution from 13C-labeled glucose.

Authors:  Chen Yang; Qiang Hua; Kazuyuki Shimizu
Journal:  Metab Eng       Date:  2002-07       Impact factor: 9.783

10.  PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria.

Authors:  Jennifer L Gardy; Cory Spencer; Ke Wang; Martin Ester; Gábor E Tusnády; István Simon; Sujun Hua; Katalin deFays; Christophe Lambert; Kenta Nakai; Fiona S L Brinkman
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

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  12 in total

1.  The Sll0606 protein is required for photosystem II assembly/stability in the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Shulu Zhang; Laurie K Frankel; Terry M Bricker
Journal:  J Biol Chem       Date:  2010-08-19       Impact factor: 5.157

2.  The malic enzyme is required for optimal photoautotrophic growth of Synechocystis sp. strain PCC 6803 under continuous light but not under a diurnal light regimen.

Authors:  Terry M Bricker; Shulu Zhang; Susan M Laborde; Paul R Mayer; Laurie K Frankel; James V Moroney
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

Review 3.  Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  Microbiol Mol Biol Rev       Date:  2013-09       Impact factor: 11.056

Review 4.  Carboxysomes: cyanobacterial RubisCO comes in small packages.

Authors:  George S Espie; Matthew S Kimber
Journal:  Photosynth Res       Date:  2011-05-10       Impact factor: 3.573

5.  Identification of two genes, sll0804 and slr1306, as putative components of the CO2-concentrating mechanism in the cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  Shulu Zhang; Kevin W Spann; Laurie K Frankel; James V Moroney; Terry M Bricker
Journal:  J Bacteriol       Date:  2008-10-17       Impact factor: 3.490

6.  Heterohexamers Formed by CcmK3 and CcmK4 Increase the Complexity of Beta Carboxysome Shells.

Authors:  Manuel Sommer; Markus Sutter; Sayan Gupta; Henning Kirst; Aiko Turmo; Sigal Lechno-Yossef; Rodney L Burton; Christine Saechao; Nancy B Sloan; Xiaolin Cheng; Leanne-Jade G Chan; Christopher J Petzold; Miguel Fuentes-Cabrera; Corie Y Ralston; Cheryl A Kerfeld
Journal:  Plant Physiol       Date:  2018-11-02       Impact factor: 8.340

7.  Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications.

Authors:  Kuo-Hsiang Tang; Yinjie J Tang; Robert Eugene Blankenship
Journal:  Front Microbiol       Date:  2011-08-01       Impact factor: 5.640

8.  High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India.

Authors:  Supratim Mukherjee; Alla Lapidus; Nicole Shapiro; Jan-Fang Cheng; James Han; Tbk Reddy; Marcel Huntemann; Natalia Ivanova; Natalia Mikhailova; Amy Chen; Krishna Palaniappan; Stefan Spring; Markus Göker; Victor Markowitz; Tanja Woyke; Brian J Tindall; Hans-Peter Klenk; Nikos C Kyrpides; Amrita Pati
Journal:  Stand Genomic Sci       Date:  2015-02-09

9.  β-Carboxysome bioinformatics: identification and evolution of new bacterial microcompartment protein gene classes and core locus constraints.

Authors:  Manuel Sommer; Fei Cai; Matthew Melnicki; Cheryl A Kerfeld
Journal:  J Exp Bot       Date:  2017-06-01       Impact factor: 6.992

10.  Structural determinants of the outer shell of β-carboxysomes in Synechococcus elongatus PCC 7942: roles for CcmK2, K3-K4, CcmO, and CcmL.

Authors:  Benjamin D Rae; Benedict M Long; Murray R Badger; G Dean Price
Journal:  PLoS One       Date:  2012-08-22       Impact factor: 3.240

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