Literature DB >> 21555213

Fundamentals of methanogenic pathways that are key to the biomethanation of complex biomass.

James G Ferry1.   

Abstract

The conversion of biomass to CH4 (biomethanation) involves an anaerobic microbial food chain composed of at least three metabolic groups of which the first two decompose the complex biomass primarily to acetate, formate, and H2. The thermodynamics of these conversions are unfavorable requiring a symbiosis with the CH4-producing group (methanogens) that metabolize the decomposition products to favorable concentrations. The methanogens produce CH4 by two major pathways, conversion of the methyl group of acetate and reduction of CO2 coupled to the oxidation of formate or H2. This review covers recent advances in the fundamental understanding of both methanogenic pathways with the view of stimulating research towards improving the rate and reliability of the overall biomethanation process.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21555213      PMCID: PMC3606815          DOI: 10.1016/j.copbio.2011.04.011

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  39 in total

1.  Carbonic anhydrase is an ancient enzyme widespread in prokaryotes.

Authors:  K S Smith; C Jakubzick; T S Whittam; J G Ferry
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

2.  Crystal structure of methyl-coenzyme M reductase: the key enzyme of biological methane formation.

Authors:  U Ermler; W Grabarse; S Shima; M Goubeaud; R K Thauer
Journal:  Science       Date:  1997-11-21       Impact factor: 47.728

3.  Methanoregula boonei gen. nov., sp. nov., an acidiphilic methanogen isolated from an acidic peat bog.

Authors:  Suzanna L Bräuer; Hinsby Cadillo-Quiroz; Rebekah J Ward; Joseph B Yavitt; Stephen H Zinder
Journal:  Int J Syst Evol Microbiol       Date:  2010-02-12       Impact factor: 2.747

4.  An unconventional pathway for reduction of CO2 to methane in CO-grown Methanosarcina acetivorans revealed by proteomics.

Authors:  Daniel J Lessner; Lingyun Li; Qingbo Li; Tomas Rejtar; Victor P Andreev; Matthew Reichlen; Kevin Hill; James J Moran; Barry L Karger; James G Ferry
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-13       Impact factor: 11.205

5.  Electron transport in the pathway of acetate conversion to methane in the marine archaeon Methanosarcina acetivorans.

Authors:  Qingbo Li; Lingyun Li; Tomas Rejtar; Daniel J Lessner; Barry L Karger; James G Ferry
Journal:  J Bacteriol       Date:  2006-01       Impact factor: 3.490

Review 6.  Life close to the thermodynamic limit: how methanogenic archaea conserve energy.

Authors:  Uwe Deppenmeier; Volker Müller
Journal:  Results Probl Cell Differ       Date:  2008

Review 7.  Nickel and the carbon cycle.

Authors:  Stephen W Ragsdale
Journal:  J Inorg Biochem       Date:  2007-07-21       Impact factor: 4.155

8.  Two separate one-electron steps in the reductive activation of the A cluster in subunit beta of the ACDS complex in Methanosarcina thermophila.

Authors:  Simonida Gencic; David A Grahame
Journal:  Biochemistry       Date:  2008-04-29       Impact factor: 3.162

9.  Genetic and proteomic analyses of CO utilization by Methanosarcina acetivorans.

Authors:  Michael Rother; Ellen Oelgeschläger; William M Metcalf
Journal:  Arch Microbiol       Date:  2007-06-07       Impact factor: 2.552

Review 10.  Old acetogens, new light.

Authors:  Harold L Drake; Anita S Gössner; Steven L Daniel
Journal:  Ann N Y Acad Sci       Date:  2008-03       Impact factor: 5.691

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  26 in total

1.  Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments.

Authors:  Patrick Browne; Hideyuki Tamaki; Nikos Kyrpides; Tanja Woyke; Lynne Goodwin; Hiroyuki Imachi; Suzanna Bräuer; Joseph B Yavitt; Wen-Tso Liu; Stephen Zinder; Hinsby Cadillo-Quiroz
Journal:  ISME J       Date:  2016-08-23       Impact factor: 10.302

Review 2.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

3.  The biotransformation of brewer's spent grain into biogas by anaerobic microbial communities.

Authors:  Dina V Malakhova; Maria A Egorova; Ljuba I Prokudina; Alexander I Netrusov; Elena A Tsavkelova
Journal:  World J Microbiol Biotechnol       Date:  2015-09-23       Impact factor: 3.312

Review 4.  Bacteria and Methanogens in the Human Microbiome: a Review of Syntrophic Interactions.

Authors:  Kenza Djemai; Michel Drancourt; Maryam Tidjani Alou
Journal:  Microb Ecol       Date:  2021-06-24       Impact factor: 4.552

Review 5.  Acetate Metabolism in Anaerobes from the Domain Archaea.

Authors:  James G Ferry
Journal:  Life (Basel)       Date:  2015-06-09

Review 6.  Microbial trophic interactions and mcrA gene expression in monitoring of anaerobic digesters.

Authors:  Alejandra Alvarado; Lilia E Montañez-Hernández; Sandra L Palacio-Molina; Ricardo Oropeza-Navarro; Miriam P Luévanos-Escareño; Nagamani Balagurusamy
Journal:  Front Microbiol       Date:  2014-11-12       Impact factor: 5.640

7.  Genetic resources for methane production from biomass described with the Gene Ontology.

Authors:  Endang Purwantini; Trudy Torto-Alalibo; Jane Lomax; João C Setubal; Brett M Tyler; Biswarup Mukhopadhyay
Journal:  Front Microbiol       Date:  2014-12-03       Impact factor: 5.640

8.  A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor.

Authors:  An Li; Ya'nan Chu; Xumin Wang; Lufeng Ren; Jun Yu; Xiaoling Liu; Jianbin Yan; Lei Zhang; Shuangxiu Wu; Shizhong Li
Journal:  Biotechnol Biofuels       Date:  2013-01-15       Impact factor: 6.040

Review 9.  Contribution of transcriptomics to systems-level understanding of methanogenic Archaea.

Authors:  Patrick D Browne; Hinsby Cadillo-Quiroz
Journal:  Archaea       Date:  2013-02-27       Impact factor: 3.273

Review 10.  The origin, source, and cycling of methane in deep crystalline rock biosphere.

Authors:  Riikka Kietäväinen; Lotta Purkamo
Journal:  Front Microbiol       Date:  2015-07-17       Impact factor: 5.640

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