Literature DB >> 21554888

Crucial points within the pore as determinants of K⁺ channel conductance and gating.

Ning Shi1, Weizhong Zeng, Sheng Ye, Yang Li, Youxing Jiang.   

Abstract

While selective for K⁺, K⁺ channels vary significantly among their rate of ion permeation. Here, we probe the effect of steric hindrance and electrostatics within the ion conduction pathway on K⁺ permeation in the MthK K⁺ channel using structure-based mutagenesis combined with single-channel electrophysiology and X-ray crystallography. We demonstrate that changes in side-chain size and polarity at Ala88, which forms the constriction point of the open MthK pore, have profound effects on single-channel conductance as well as open probability. We also reveal that the negatively charged Glu92s at the intracellular entrance of the open pore form an electrostatic trap, which stabilizes a hydrated K⁺ and facilitates ion permeation. This electrostatic attraction is also responsible for intracellular divalent blockage, which renders the channel inward rectified in the presence of Ca²⁺. In light of the high structural conservation of the selectivity filter, the size and chemical environment differences within the portion of the ion conduction pathway other than the filter are likely the determinants for the conductance variations among K⁺ channels.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21554888      PMCID: PMC3171199          DOI: 10.1016/j.jmb.2011.04.058

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  24 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  Crystal structure and mechanism of a calcium-gated potassium channel.

Authors:  Youxing Jiang; Alice Lee; Jiayun Chen; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  Nature       Date:  2002-05-30       Impact factor: 49.962

3.  The open pore conformation of potassium channels.

Authors:  Youxing Jiang; Alice Lee; Jiayun Chen; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  Nature       Date:  2002-05-30       Impact factor: 49.962

4.  Modulation of MthK potassium channel activity at the intracellular entrance to the pore.

Authors:  Lyubov V Parfenova; Brittany M Crane; Brad S Rothberg
Journal:  J Biol Chem       Date:  2006-05-25       Impact factor: 5.157

5.  Atomic structure of a Na+- and K+-conducting channel.

Authors:  Ning Shi; Sheng Ye; Amer Alam; Liping Chen; Youxing Jiang
Journal:  Nature       Date:  2006-02-08       Impact factor: 49.962

6.  A functional connection between the pores of distantly related ion channels as revealed by mutant K+ channels.

Authors:  L Heginbotham; T Abramson; R MacKinnon
Journal:  Science       Date:  1992-11-13       Impact factor: 47.728

7.  The pore dimensions of gramicidin A.

Authors:  O S Smart; J M Goodfellow; B A Wallace
Journal:  Biophys J       Date:  1993-12       Impact factor: 4.033

8.  Mutations in the K+ channel signature sequence.

Authors:  L Heginbotham; Z Lu; T Abramson; R MacKinnon
Journal:  Biophys J       Date:  1994-04       Impact factor: 4.033

9.  Gating and inward rectifying properties of the MthK K+ channel with and without the gating ring.

Authors:  Yang Li; Ian Berke; Liping Chen; Youxing Jiang
Journal:  J Gen Physiol       Date:  2007-02       Impact factor: 4.086

10.  High-resolution structure of the open NaK channel.

Authors:  Amer Alam; Youxing Jiang
Journal:  Nat Struct Mol Biol       Date:  2008-12-21       Impact factor: 15.369

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  10 in total

1.  BK channel opening involves side-chain reorientation of multiple deep-pore residues.

Authors:  Xixi Chen; Jiusheng Yan; Richard W Aldrich
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-23       Impact factor: 11.205

2.  K⁺ conduction and Mg²⁺ blockade in a shaker Kv-channel single point mutant with an unusually high conductance.

Authors:  Cristian Moscoso; Ariela Vergara-Jaque; Valeria Márquez-Miranda; Romina V Sepúlveda; Ignacio Valencia; Ignacio Díaz-Franulic; Fernando González-Nilo; David Naranjo
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

3.  Calcium ions open a selectivity filter gate during activation of the MthK potassium channel.

Authors:  David J Posson; Radda Rusinova; Olaf S Andersen; Crina M Nimigean
Journal:  Nat Commun       Date:  2015-09-23       Impact factor: 14.919

4.  Ionic interactions of Ba2+ blockades in the MthK K+ channel.

Authors:  Rui Guo; Weizhong Zeng; Hengjun Cui; Liping Chen; Sheng Ye
Journal:  J Gen Physiol       Date:  2014-07-14       Impact factor: 4.086

5.  Polyamine blockade and binding energetics in the MthK potassium channel.

Authors:  Antonio Suma; Daniele Granata; Andrew S Thomson; Vincenzo Carnevale; Brad S Rothberg
Journal:  J Gen Physiol       Date:  2020-07-06       Impact factor: 4.086

6.  Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.

Authors:  Chunguang Kong; Weizhong Zeng; Sheng Ye; Liping Chen; David Bryant Sauer; Yeeling Lam; Mehabaw Getahun Derebe; Youxing Jiang
Journal:  Elife       Date:  2012-12-13       Impact factor: 8.140

Review 7.  Hydrophobic gating in ion channels.

Authors:  Prafulla Aryal; Mark S P Sansom; Stephen J Tucker
Journal:  J Mol Biol       Date:  2014-08-12       Impact factor: 6.151

8.  What keeps Kv channels small? The molecular physiology of modesty.

Authors:  Jon T Sack; Drew C Tilley
Journal:  J Gen Physiol       Date:  2015-08       Impact factor: 4.086

9.  A hydrophobic barrier deep within the inner pore of the TWIK-1 K2P potassium channel.

Authors:  Prafulla Aryal; Firdaus Abd-Wahab; Giovanna Bucci; Mark S P Sansom; Stephen J Tucker
Journal:  Nat Commun       Date:  2014-07-08       Impact factor: 17.694

Review 10.  Pore size matters for potassium channel conductance.

Authors:  David Naranjo; Hans Moldenhauer; Matías Pincuntureo; Ignacio Díaz-Franulic
Journal:  J Gen Physiol       Date:  2016-09-12       Impact factor: 4.086

  10 in total

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