Literature DB >> 21551311

Genome sequence of the abyssomicin- and proximicin-producing marine actinomycete Verrucosispora maris AB-18-032.

Hanseong Roh1, Gabriel C Uguru, Hyeok-Jin Ko, Sujin Kim, Byung-Yong Kim, Michael Goodfellow, Alan T Bull, Kyoung Heon Kim, Mervyn J Bibb, In-Geol Choi, James E M Stach.   

Abstract

Verrucosispora maris AB-18-032 is a marine actinomycete that produces atrop-abyssomicin C and proximicin A, both of which have novel structures and modes of action. In order to understand the biosynthesis of these compounds, to identify further biosynthetic potential, and to facilitate rational improvement of secondary metabolite titers, we have sequenced the complete 6.7-Mb genome of Verrucosispora maris AB-18-032.

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Year:  2011        PMID： 21551311      PMCID： PMC3133294          DOI： 10.1128/JB.05041-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  11 in total

1.  Abyssomicin C-A polycyclic antibiotic from a marine Verrucosispora strain as an inhibitor of the p-aminobenzoic acid/tetrahydrofolate biosynthesis pathway.

Authors:  Bojan Bister; Daniel Bischoff; Markus Ströbele; Julia Riedlinger; Andreas Reicke; Falko Wolter; Alan T Bull; Hans Zähner; Hans-Peter Fiedler; Roderich D Süssmuth
Journal:  Angew Chem Int Ed Engl       Date:  2004-05-03       Impact factor: 15.336

2.  Action of atrop-abyssomicin C as an inhibitor of 4-amino-4-deoxychorismate synthase PabB.

Authors:  Simone Keller; Heiko S Schadt; Ingo Ortel; Roderich D Süssmuth
Journal:  Angew Chem Int Ed Engl       Date:  2007       Impact factor: 15.336

3.  Abyssomicins G and H and atrop-abyssomicin C from the marine Verrucosispora strain AB-18-032.

Authors:  Simone Keller; Graeme Nicholson; Carmen Drahl; Erik Sorensen; Hans-Peter Fiedler; Roderich D Süssmuth
Journal:  J Antibiot (Tokyo)       Date:  2007-06       Impact factor: 2.649

4.  Proximicins A, B, and C-antitumor furan analogues of netropsin from the marine actinomycete Verrucosispora induce upregulation of p53 and the cyclin kinase inhibitor p21.

Authors:  Kathrin Schneider; Simone Keller; Falko E Wolter; Lars Röglin; Winfried Beil; Oliver Seitz; Graeme Nicholson; Christina Bruntner; Julia Riedlinger; Hans-Peter Fiedler; Roderich D Süssmuth
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

5.  ABySS: a parallel assembler for short read sequence data.

Authors:  Jared T Simpson; Kim Wong; Shaun D Jackman; Jacqueline E Schein; Steven J M Jones; Inanç Birol
Journal:  Genome Res       Date:  2009-02-27       Impact factor: 9.043

6.  Proximicin A, B and C, novel aminofuran antibiotic and anticancer compounds isolated from marine strains of the actinomycete Verrucosispora.

Authors:  Hans-Peter Fiedler; Christina Bruntner; Julia Riedlinger; Alan T Bull; Gjert Knutsen; Michael Goodfellow; Amanda Jones; Luis Maldonado; Wasu Pathom-aree; Winfried Beil; Kathrin Schneider; Simone Keller; Roderich D Sussmuth
Journal:  J Antibiot (Tokyo)       Date:  2008-03       Impact factor: 2.649

7.  The abyssomicin C family as in vitro inhibitors of Mycobacterium tuberculosis.

Authors:  Joel S Freundlich; Mallikarjun Lalgondar; Jun-Rong Wei; Stephanie Swanson; Erik J Sorensen; Eric J Rubin; James C Sacchettini
Journal:  Tuberculosis (Edinb)       Date:  2010-08-23       Impact factor: 3.131

8.  Abyssomicins, inhibitors of the para-aminobenzoic acid pathway produced by the marine Verrucosispora strain AB-18-032.

Authors:  Julia Riedlinger; Andreas Reicke; Hans Zähner; Bernhard Krismer; Alan T Bull; Luis A Maldonado; Alan C Ward; Michael Goodfellow; Bojan Bister; Daniel Bischoff; Roderich D Süssmuth; Hans-Peter Fiedler
Journal:  J Antibiot (Tokyo)       Date:  2004-04       Impact factor: 2.649

9.  Aggressive assembly of pyrosequencing reads with mates.

Authors:  Jason R Miller; Arthur L Delcher; Sergey Koren; Eli Venter; Brian P Walenz; Anushka Brownley; Justin Johnson; Kelvin Li; Clark Mobarry; Granger Sutton
Journal:  Bioinformatics       Date:  2008-10-24       Impact factor: 6.937

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
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  7 in total

Review 1.  Natural [4 + 2]-Cyclases.

Authors:  Byung-Sun Jeon; Shao-An Wang; Mark W Ruszczycky; Hung-Wen Liu
Journal:  Chem Rev       Date:  2016-12-01       Impact factor: 60.622

2.  The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110.

Authors:  Patrick Schwientek; Rafael Szczepanowski; Christian Rückert; Jörn Kalinowski; Andreas Klein; Klaus Selber; Udo F Wehmeier; Jens Stoye; Alfred Pühler
Journal:  BMC Genomics       Date:  2012-03-23       Impact factor: 3.969

3.  CRISPR/cas loci of type II Propionibacterium acnes confer immunity against acquisition of mobile elements present in type I P. acnes.

Authors:  Holger Brüggemann; Hans B Lomholt; Hervé Tettelin; Mogens Kilian
Journal:  PLoS One       Date:  2012-03-30       Impact factor: 3.240

Review 4.  Spirotetronate polyketides as leads in drug discovery.

Authors:  Michelle H Lacoske; Emmanuel A Theodorakis
Journal:  J Nat Prod       Date:  2014-12-01       Impact factor: 4.050

Review 5.  Diversity and Applications of Endophytic Actinobacteria of Plants in Special and Other Ecological Niches.

Authors:  Radha Singh; Ashok K Dubey
Journal:  Front Microbiol       Date:  2018-08-08       Impact factor: 5.640

6.  Bioactive secondary metabolites from marine Actinomyces sp. AW6 with an evaluation of ADME-related physicochemical properties.

Authors:  Mohamed A Agour; Ahmed A Hamed; Mosad A Ghareeb; Eman A A Abdel-Hamid; Mohamed K Ibrahim
Journal:  Arch Microbiol       Date:  2022-08-01       Impact factor: 2.667

Review 7.  Abyssomicins-A 20-Year Retrospective View.

Authors:  Hans-Peter Fiedler
Journal:  Mar Drugs       Date:  2021-05-24       Impact factor: 5.118
  7 in total

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