Literature DB >> 21551100

NifEN-B complex of Azotobacter vinelandii is fully functional in nitrogenase FeMo cofactor assembly.

Jared A Wiig1, Yilin Hu, Markus W Ribbe.   

Abstract

Assembly of nitrogenase FeMoco is one of the key processes in bioinorganic chemistry. NifB and NifEN are two essential elements immediately adjacent to each other along the biosynthetic pathway of FeMoco. Previously, an 8Fe-precursor of FeMoco was identified on NifEN; however, the identity of the biosynthetic intermediate on NifB has remained elusive to date. Here, we present a combined biochemical and spectroscopic investigation of a His-tagged NifEN-B fusion protein of Azotobacter vinelandii. Our data from the EPR and activity analyses confirm the presence of the 8Fe-precursor in the NifEN entity of NifEN-B; whereas those from the metal, EPR, and UV/Vis experiments reveal the presence of additional [Fe(4)S(4)]-type cluster species in the NifB entity of NifEN-B. EPR-, UV/Vis- and metal-based quantitative analyses suggest that the newly identified cluster species in NifEN-B consist of both SAM-motif (CXXXCXXC)- and non-SAM-motif-bound [Fe(4)S(4)]-type clusters. Moreover, EPR and activity experiments indicate that the non-SAM-motif [Fe(4)S(4)] cluster is a NifB-bound intermediate of FeMoco assembly, which could be converted to the 8Fe-precursor in a SAM-dependent mechanism. Combined outcome of this work provides the initial insights into the biosynthetic events of FeMoco on NifB. More importantly, the full capacity of NifEN-B in FeMoco biosynthesis demonstrates the potential of this fusion protein as an excellent platform for further investigations of the role of NifB and its interaction with NifEN during the process of FeMoco assembly.

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Year:  2011        PMID: 21551100      PMCID: PMC3102359          DOI: 10.1073/pnas.1102773108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Structure of a cofactor-deficient nitrogenase MoFe protein.

Authors:  Benedikt Schmid; Markus W Ribbe; Oliver Einsle; Mika Yoshida; Leonard M Thomas; Dennis R Dean; Douglas C Rees; Barbara K Burgess
Journal:  Science       Date:  2002-04-12       Impact factor: 47.728

2.  Mechanism of Molybdenum Nitrogenase.

Authors:  Barbara K. Burgess; David J. Lowe
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

3.  Nitrogenase MoFe-protein at 1.16 A resolution: a central ligand in the FeMo-cofactor.

Authors:  Oliver Einsle; F Akif Tezcan; Susana L A Andrade; Benedikt Schmid; Mika Yoshida; James B Howard; Douglas C Rees
Journal:  Science       Date:  2002-09-06       Impact factor: 47.728

4.  The role of methionine 156 in cross-subunit nucleotide interactions in the iron protein of nitrogenase.

Authors:  E H Bursey; B K Burgess
Journal:  J Biol Chem       Date:  1998-11-06       Impact factor: 5.157

5.  Structure of ADP x AIF4(-)-stabilized nitrogenase complex and its implications for signal transduction.

Authors:  H Schindelin; C Kisker; J L Schlessman; J B Howard; D C Rees
Journal:  Nature       Date:  1997-05-22       Impact factor: 49.962

6.  The FeMoco-deficient MoFe protein produced by a nifH deletion strain of Azotobacter vinelandii shows unusual P-cluster features.

Authors:  Markus W Ribbe; Yilin Hu; Maolin Guo; Benedikt Schmid; Barbara K Burgess
Journal:  J Biol Chem       Date:  2002-04-26       Impact factor: 5.157

7.  Characterization of Azotobacter vinelandii nifZ deletion strains. Indication of stepwise MoFe protein assembly.

Authors:  Yilin Hu; Aaron W Fay; Patricia C Dos Santos; Farzad Naderi; Markus W Ribbe
Journal:  J Biol Chem       Date:  2004-10-12       Impact factor: 5.157

8.  FeMo cofactor synthesis by a nifH mutant with altered MgATP reactivity.

Authors:  N Gavini; B K Burgess
Journal:  J Biol Chem       Date:  1992-10-15       Impact factor: 5.157

9.  Optimal conditions for transformation of Azotobacter vinelandii.

Authors:  W J Page; M von Tigerstrom
Journal:  J Bacteriol       Date:  1979-09       Impact factor: 3.490

10.  Structure of precursor-bound NifEN: a nitrogenase FeMo cofactor maturase/insertase.

Authors:  Jens T Kaiser; Yilin Hu; Jared A Wiig; Douglas C Rees; Markus W Ribbe
Journal:  Science       Date:  2011-01-07       Impact factor: 47.728

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  33 in total

1.  Identification and characterization of functional homologs of nitrogenase cofactor biosynthesis protein NifB from methanogens.

Authors:  Aaron W Fay; Jared A Wiig; Chi Chung Lee; Yilin Hu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-16       Impact factor: 11.205

Review 2.  Biosynthesis of nitrogenase metalloclusters.

Authors:  Markus W Ribbe; Yilin Hu; Keith O Hodgson; Britt Hedman
Journal:  Chem Rev       Date:  2013-12-13       Impact factor: 60.622

3.  Role of RNA secondary structure and processing in stability of the nifH1 transcript in the cyanobacterium Anabaena variabilis.

Authors:  Brenda S Pratte; Justin Ungerer; Teresa Thiel
Journal:  J Bacteriol       Date:  2015-02-09       Impact factor: 3.490

4.  Role of the nifB1 and nifB2 Promoters in Cell-Type-Specific Expression of Two Mo Nitrogenases in the Cyanobacterium Anabaena variabilis ATCC 29413.

Authors:  Susan A Vernon; Brenda S Pratte; Teresa Thiel
Journal:  J Bacteriol       Date:  2017-01-30       Impact factor: 3.490

Review 5.  Nitrogenase assembly.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  Biochim Biophys Acta       Date:  2012-12-08

Review 6.  Biosynthesis of the iron-molybdenum cofactor of nitrogenase.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  J Biol Chem       Date:  2013-03-28       Impact factor: 5.157

Review 7.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

Review 8.  A journey into the active center of nitrogenase.

Authors:  Yilin Hu; Markus W Ribbe
Journal:  J Biol Inorg Chem       Date:  2014-04-22       Impact factor: 3.358

Review 9.  Reactivity, Mechanism, and Assembly of the Alternative Nitrogenases.

Authors:  Andrew J Jasniewski; Chi Chung Lee; Markus W Ribbe; Yilin Hu
Journal:  Chem Rev       Date:  2020-03-04       Impact factor: 60.622

10.  X-ray spectroscopic observation of an interstitial carbide in NifEN-bound FeMoco precursor.

Authors:  Kyle M Lancaster; Yilin Hu; Uwe Bergmann; Markus W Ribbe; Serena DeBeer
Journal:  J Am Chem Soc       Date:  2013-01-08       Impact factor: 15.419

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