Literature DB >> 21550256

Diverse interactions of retroviral Gag proteins with RNAs.

Alan Rein1, Siddhartha A K Datta, Christopher P Jones, Karin Musier-Forsyth.   

Abstract

Retrovirus particles are constructed from a single virus-encoded protein, termed Gag. Given that assembly is an essential step in the viral replication cycle, it is a potential target for antiviral therapy. However, such an approach has not yet been exploited because of the lack of fundamental knowledge concerning the structures and interactions responsible for assembly. Assembling an infectious particle entails a remarkably diverse array of interactions, both specific and nonspecific, between Gag proteins and RNAs. These interactions are essential for the construction of the particle, for packaging of the viral RNA into the particle, and for placement of the primer for viral DNA synthesis. Recent results have provided some new insights into each of these interactions. In the case of HIV-1 Gag, it is clear that more than one domain of the protein contributes to Gag-RNA interaction. Published by Elsevier Ltd.

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Year:  2011        PMID: 21550256      PMCID: PMC3130074          DOI: 10.1016/j.tibs.2011.04.001

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  83 in total

1.  A HIV-1 minimal gag protein is superior to nucleocapsid at in vitro annealing and exhibits multimerization-induced inhibition of reverse transcription.

Authors:  Ariel Roldan; Otis U Warren; Rodney S Russell; Chen Liang; Mark A Wainberg
Journal:  J Biol Chem       Date:  2005-02-24       Impact factor: 5.157

2.  The highly structured encapsidation signal of MuLV RNA is involved in the nuclear export of its unspliced RNA.

Authors:  Fatima Smagulova; Stéphan Maurel; Zakia Morichaud; Christian Devaux; Marylène Mougel; Laurent Houzet
Journal:  J Mol Biol       Date:  2005-11-02       Impact factor: 5.469

3.  The packaging signal of MLV is an integrated module that mediates intracellular transport of genomic RNAs.

Authors:  Eugenia Basyuk; Séverine Boulon; Finn Skou Pedersen; Edouard Bertrand; Søren Vestergaard Rasmussen
Journal:  J Mol Biol       Date:  2005-10-10       Impact factor: 5.469

Review 4.  Nucleic acid chaperone activity of HIV-1 nucleocapsid protein: critical role in reverse transcription and molecular mechanism.

Authors:  Judith G Levin; Jianhui Guo; Ioulia Rouzina; Karin Musier-Forsyth
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2005

Review 5.  How retroviruses select their genomes.

Authors:  Victoria D'Souza; Michael F Summers
Journal:  Nat Rev Microbiol       Date:  2005-08       Impact factor: 60.633

6.  Interactions of HIV-1 Gag with assembly cofactors.

Authors:  Nick Shkriabai; Siddhartha A K Datta; Zhuojun Zhao; Sonja Hess; Alan Rein; Mamuka Kvaratskhelia
Journal:  Biochemistry       Date:  2006-04-04       Impact factor: 3.162

7.  Cryo-electron microscopy reveals conserved and divergent features of gag packing in immature particles of Rous sarcoma virus and human immunodeficiency virus.

Authors:  John A G Briggs; Marc C Johnson; Martha N Simon; Stephen D Fuller; Volker M Vogt
Journal:  J Mol Biol       Date:  2005-11-02       Impact factor: 5.469

8.  The retroviral capsid domain dictates virion size, morphology, and coassembly of gag into virus-like particles.

Authors:  Danso Ako-Adjei; Marc C Johnson; Volker M Vogt
Journal:  J Virol       Date:  2005-11       Impact factor: 5.103

9.  Complex interactions of HIV-1 nucleocapsid protein with oligonucleotides.

Authors:  Robert J Fisher; Matthew J Fivash; Andrew G Stephen; Nathan A Hagan; Shilpa R Shenoy; Maxine V Medaglia; Lindsey R Smith; Karen M Worthy; John T Simpson; Robert Shoemaker; Karen L McNitt; Donald G Johnson; Catherine V Hixson; Robert J Gorelick; Daniele Fabris; Louis E Henderson; Alan Rein
Journal:  Nucleic Acids Res       Date:  2006-01-24       Impact factor: 16.971

Review 10.  Is HIV-1 RNA dimerization a prerequisite for packaging? Yes, no, probably?

Authors:  Rodney S Russell; Chen Liang; Mark A Wainberg
Journal:  Retrovirology       Date:  2004-09-02       Impact factor: 4.602

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  60 in total

Review 1.  HIV-1 assembly, budding, and maturation.

Authors:  Wesley I Sundquist; Hans-Georg Kräusslich
Journal:  Cold Spring Harb Perspect Med       Date:  2012-07       Impact factor: 6.915

2.  HIV-1 Pr55Gag binds genomic and spliced RNAs with different affinity and stoichiometry.

Authors:  Serena Bernacchi; Ekram W Abd El-Wahab; Noé Dubois; Marcel Hijnen; Redmond P Smyth; Johnson Mak; Roland Marquet; Jean-Christophe Paillart
Journal:  RNA Biol       Date:  2016-11-14       Impact factor: 4.652

3.  How HIV finds the door.

Authors:  Matthew Scott Lalonde; Wesley I Sundquist
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-01       Impact factor: 11.205

4.  Crystal structure of an antiviral ankyrin targeting the HIV-1 capsid and molecular modeling of the ankyrin-capsid complex.

Authors:  Warachai Praditwongwan; Phimonphan Chuankhayan; Somphot Saoin; Tanchanok Wisitponchai; Vannajan Sanghiran Lee; Sawitree Nangola; Saw See Hong; Philippe Minard; Pierre Boulanger; Chun-Jung Chen; Chatchai Tayapiwatana
Journal:  J Comput Aided Mol Des       Date:  2014-07-05       Impact factor: 3.686

5.  A conformational transition observed in single HIV-1 Gag molecules during in vitro assembly of virus-like particles.

Authors:  James B Munro; Abhinav Nath; Michael Färber; Siddhartha A K Datta; Alan Rein; Elizabeth Rhoades; Walther Mothes
Journal:  J Virol       Date:  2014-01-08       Impact factor: 5.103

6.  Solution Conformation of Bovine Leukemia Virus Gag Suggests an Elongated Structure.

Authors:  Dominic F Qualley; Sarah E Cooper; James L Ross; Erik D Olson; William A Cantara; Karin Musier-Forsyth
Journal:  J Mol Biol       Date:  2019-02-04       Impact factor: 5.469

7.  The Ty1 LTR-retrotransposon of budding yeast, Saccharomyces cerevisiae.

Authors:  M Joan Curcio; Sheila Lutz; Pascale Lesage
Journal:  Microbiol Spectr       Date:  2015-04-01

8.  Dual role for motif 1 residues of human lysyl-tRNA synthetase in dimerization and packaging into HIV-1.

Authors:  Varun Dewan; Min Wei; Lawrence Kleiman; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

9.  Efficient transient genetic manipulation in vitro and in vivo by prototype foamy virus-mediated nonviral RNA transfer.

Authors:  Martin V Hamann; Nicole Stanke; Erik Müllers; Kristin Stirnnagel; Sylvia Hütter; Benedetta Artegiani; Sara Bragado Alonso; Federico Calegari; Dirk Lindemann
Journal:  Mol Ther       Date:  2014-05-12       Impact factor: 11.454

10.  MicroRNA binding to the HIV-1 Gag protein inhibits Gag assembly and virus production.

Authors:  Antony K Chen; Prabuddha Sengupta; Kayoko Waki; Schuyler B Van Engelenburg; Takahiro Ochiya; Sherimay D Ablan; Eric O Freed; Jennifer Lippincott-Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-17       Impact factor: 11.205

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