Literature DB >> 21548783

Transmembrane communication: general principles and lessons from the structure and function of the M2 proton channel, K⁺ channels, and integrin receptors.

Gevorg Grigoryan1, David T Moore, William F DeGrado.   

Abstract

Signal transduction across biological membranes is central to life. This process generally happens through communication between different domains and hierarchical coupling of information. Here, we review structural and thermodynamic principles behind transmembrane (TM) signal transduction and discuss common themes. Communication between signaling domains can be understood in terms of thermodynamic and kinetic principles, and complex signaling patterns can arise from simple wiring of thermodynamically coupled domains. We relate this to functions of several signal transduction systems: the M2 proton channel from influenza A virus, potassium channels, integrin receptors, and bacterial kinases. We also discuss key features in the structural rearrangements responsible for signal transduction in these systems.

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Year:  2011        PMID: 21548783      PMCID: PMC3767166          DOI: 10.1146/annurev-biochem-091008-152423

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  148 in total

1.  A mutant KcsA K(+) channel with altered conduction properties and selectivity filter ion distribution.

Authors:  Ming Zhou; Roderick MacKinnon
Journal:  J Mol Biol       Date:  2004-05-07       Impact factor: 5.469

Review 2.  Influence of solubilizing environments on membrane protein structures.

Authors:  Timothy A Cross; Mukesh Sharma; Myunggi Yi; Huan-Xiang Zhou
Journal:  Trends Biochem Sci       Date:  2010-08-18       Impact factor: 13.807

Review 3.  The tail of integrins, talin, and kindlins.

Authors:  Markus Moser; Kyle R Legate; Roy Zent; Reinhard Fässler
Journal:  Science       Date:  2009-05-15       Impact factor: 47.728

4.  Dynamics, energetics, and selectivity of the low-K+ KcsA channel structure.

Authors:  Carmen Domene; Simone Furini
Journal:  J Mol Biol       Date:  2009-04-23       Impact factor: 5.469

5.  Mechanically activated integrin switch controls alpha5beta1 function.

Authors:  Julie C Friedland; Mark H Lee; David Boettiger
Journal:  Science       Date:  2009-01-30       Impact factor: 47.728

6.  The role of protonation and metal chelation preferences in defining the properties of mercury-binding coiled coils.

Authors:  G R Dieckmann; D K McRorie; J D Lear; K A Sharp; W F DeGrado; V L Pecoraro
Journal:  J Mol Biol       Date:  1998-07-31       Impact factor: 5.469

Review 7.  Cell signaling by receptor tyrosine kinases.

Authors:  Mark A Lemmon; Joseph Schlessinger
Journal:  Cell       Date:  2010-06-25       Impact factor: 41.582

8.  Design and pharmacological characterization of inhibitors of amantadine-resistant mutants of the M2 ion channel of influenza A virus.

Authors:  Victoria Balannik; Jun Wang; Yuki Ohigashi; Xianghong Jing; Emma Magavern; Robert A Lamb; William F Degrado; Lawrence H Pinto
Journal:  Biochemistry       Date:  2009-12-22       Impact factor: 3.162

9.  The structure of a receptor with two associating transmembrane domains on the cell surface: integrin alphaIIbbeta3.

Authors:  Jieqing Zhu; Bing-Hao Luo; Patrick Barth; Jack Schonbrun; David Baker; Timothy A Springer
Journal:  Mol Cell       Date:  2009-04-24       Impact factor: 17.970

10.  A trapped intracellular cation modulates K+ channel recovery from slow inactivation.

Authors:  Evan C Ray; Carol Deutsch
Journal:  J Gen Physiol       Date:  2006-07-17       Impact factor: 4.086

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  15 in total

1.  Investigation of a Catenane with a Responsive Noncovalent Network: Mimicking Long-Range Responses in Proteins.

Authors:  Mee-Kyung Chung; Peter S White; Stephen J Lee; Michel R Gagné; Marcey L Waters
Journal:  J Am Chem Soc       Date:  2016-09-29       Impact factor: 15.419

Review 2.  Juxtamembrane contribution to transmembrane signaling.

Authors:  Wei Deng; Renhao Li
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

3.  Affinity of talin-1 for the β3-integrin cytosolic domain is modulated by its phospholipid bilayer environment.

Authors:  David T Moore; Patrik Nygren; Hyunil Jo; Kathleen Boesze-Battaglia; Joel S Bennett; William F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-30       Impact factor: 11.205

4.  A Conserved Ectodomain-Transmembrane Domain Linker Motif Tunes the Allosteric Regulation of Cell Surface Receptors.

Authors:  Thomas Schmidt; Feng Ye; Alan J Situ; Woojin An; Mark H Ginsberg; Tobias S Ulmer
Journal:  J Biol Chem       Date:  2016-06-30       Impact factor: 5.157

Review 5.  Fluorophores, environments, and quantification techniques in the analysis of transmembrane helix interaction using FRET.

Authors:  Ambalika S Khadria; Alessandro Senes
Journal:  Biopolymers       Date:  2015-07       Impact factor: 2.505

6.  Multidimensional umbrella sampling and replica-exchange molecular dynamics simulations for structure prediction of transmembrane helix dimers.

Authors:  Pai-Chi Li; Naoyuki Miyashita; Wonpil Im; Satoshi Ishido; Yuji Sugita
Journal:  J Comput Chem       Date:  2013-11-21       Impact factor: 3.376

Review 7.  Signal transduction in histidine kinases: insights from new structures.

Authors:  Manasi P Bhate; Kathleen S Molnar; Mark Goulian; William F DeGrado
Journal:  Structure       Date:  2015-05-14       Impact factor: 5.006

8.  Stepwise priming by acidic pH and a high K+ concentration is required for efficient uncoating of influenza A virus cores after penetration.

Authors:  Sarah Stauffer; Yuehan Feng; Firat Nebioglu; Rosalie Heilig; Paola Picotti; Ari Helenius
Journal:  J Virol       Date:  2014-08-27       Impact factor: 5.103

9.  Agrobacterium tumefaciens recognizes its host environment using ChvE to bind diverse plant sugars as virulence signals.

Authors:  Xiaozhen Hu; Jinlei Zhao; William F DeGrado; Andrew N Binns
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-24       Impact factor: 11.205

Review 10.  Life at the border: adaptation of proteins to anisotropic membrane environment.

Authors:  Irina D Pogozheva; Henry I Mosberg; Andrei L Lomize
Journal:  Protein Sci       Date:  2014-07-02       Impact factor: 6.725

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