Literature DB >> 25982528

Signal transduction in histidine kinases: insights from new structures.

Manasi P Bhate1, Kathleen S Molnar2, Mark Goulian3, William F DeGrado4.   

Abstract

Histidine kinases (HKs) are major players in bacterial signaling. There has been an explosion of new HK crystal structures in the last 5 years. We globally analyze the structures of HKs to yield insights into the mechanisms by which signals are transmitted to and across protein structures in this family. We interpret known enzymological data in the context of new structural data to show how asymmetry across the dimer interface is a key feature of signal transduction in HKs, and discuss how different HK domains undergo asymmetric to symmetric transitions during signal transduction and catalysis. A thermodynamic framework for signaling that encompasses these various properties is presented, and the consequences of weak thermodynamic coupling are discussed. The synthesis of observations from enzymology, structural biology, protein engineering, and thermodynamics paves the way for a deeper molecular understanding of HK signal transduction.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25982528      PMCID: PMC4456306          DOI: 10.1016/j.str.2015.04.002

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  82 in total

1.  Genomic analysis of the histidine kinase family in bacteria and archaea.

Authors:  Dong-Jin Kim; Steven Forst
Journal:  Microbiology (Reading)       Date:  2001-05       Impact factor: 2.777

2.  Asymmetry in the autophosphorylation of the two-component regulatory system transmitter protein nitrogen regulator II of Escherichia coli.

Authors:  P Jiang; J A Peliska; A J Ninfa
Journal:  Biochemistry       Date:  2000-05-02       Impact factor: 3.162

3.  The S-helix determines the signal in a Tsr receptor/adenylyl cyclase reporter.

Authors:  Karin Winkler; Anita Schultz; Joachim E Schultz
Journal:  J Biol Chem       Date:  2012-03-15       Impact factor: 5.157

Review 4.  Stimulus perception in bacterial signal-transducing histidine kinases.

Authors:  Thorsten Mascher; John D Helmann; Gottfried Unden
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

5.  Native cell wall organization shown by cryo-electron microscopy confirms the existence of a periplasmic space in Staphylococcus aureus.

Authors:  Valério R F Matias; Terry J Beveridge
Journal:  J Bacteriol       Date:  2006-02       Impact factor: 3.490

Review 6.  Receiver domain structure and function in response regulator proteins.

Authors:  Robert B Bourret
Journal:  Curr Opin Microbiol       Date:  2010-03-06       Impact factor: 7.934

7.  Recognition of antimicrobial peptides by a bacterial sensor kinase.

Authors:  Martin W Bader; Sarah Sanowar; Margaret E Daley; Anna R Schneider; Uhnsoo Cho; Wenqing Xu; Rachel E Klevit; Hervé Le Moual; Samuel I Miller
Journal:  Cell       Date:  2005-08-12       Impact factor: 41.582

8.  Structure of concatenated HAMP domains provides a mechanism for signal transduction.

Authors:  Michael V Airola; Kylie J Watts; Alexandrine M Bilwes; Brian R Crane
Journal:  Structure       Date:  2010-03-14       Impact factor: 5.006

Review 9.  Transmembrane communication: general principles and lessons from the structure and function of the M2 proton channel, K⁺ channels, and integrin receptors.

Authors:  Gevorg Grigoryan; David T Moore; William F DeGrado
Journal:  Annu Rev Biochem       Date:  2011       Impact factor: 23.643

Review 10.  Structure and signaling mechanism of Per-ARNT-Sim domains.

Authors:  Andreas Möglich; Rebecca A Ayers; Keith Moffat
Journal:  Structure       Date:  2009-10-14       Impact factor: 5.006

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  82 in total

1.  The SrrAB two-component system regulates Staphylococcus aureus pathogenicity through redox sensitive cysteines.

Authors:  Nitija Tiwari; Marisa López-Redondo; Laura Miguel-Romero; Katarina Kulhankova; Michael P Cahill; Phuong M Tran; Kyle J Kinney; Samuel H Kilgore; Hassan Al-Tameemi; Christine A Herfst; Stephen W Tuffs; John R Kirby; Jeffery M Boyd; John K McCormick; Wilmara Salgado-Pabón; Alberto Marina; Patrick M Schlievert; Ernesto J Fuentes
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-30       Impact factor: 11.205

2.  Sensory domain contraction in histidine kinase CitA triggers transmembrane signaling in the membrane-bound sensor.

Authors:  Michele Salvi; Benjamin Schomburg; Karin Giller; Sabrina Graf; Gottfried Unden; Stefan Becker; Adam Lange; Christian Griesinger
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

Review 3.  Structure and function of HWE/HisKA2-family sensor histidine kinases.

Authors:  Julien Herrou; Sean Crosson; Aretha Fiebig
Journal:  Curr Opin Microbiol       Date:  2017-02-11       Impact factor: 7.934

4.  Two Mutations Commonly Associated with Daptomycin Resistance in Enterococcus faecium LiaST120A and LiaRW73C Appear To Function Epistatically in LiaFSR Signaling.

Authors:  Milya Davlieva; Chelsea Wu; Yue Zhou; Cesar A Arias; Yousif Shamoo
Journal:  Biochemistry       Date:  2018-11-27       Impact factor: 3.162

5.  Mechanism of metal ion-induced activation of a two-component sensor kinase.

Authors:  Trisiani Affandi; Megan M McEvoy
Journal:  Biochem J       Date:  2019-01-15       Impact factor: 3.857

6.  The Essential Role of Hypermutation in Rapid Adaptation to Antibiotic Stress.

Authors:  Heer H Mehta; Amy G Prater; Kathryn Beabout; Ryan A L Elworth; Mark Karavis; Henry S Gibbons; Yousif Shamoo
Journal:  Antimicrob Agents Chemother       Date:  2019-06-24       Impact factor: 5.191

Review 7.  The accommodation index measures the perturbation associated with insertions and deletions in coiled-coils: Application to understand signaling in histidine kinases.

Authors:  Nathan W Schmidt; Gevorg Grigoryan; William F DeGrado
Journal:  Protein Sci       Date:  2017-02-23       Impact factor: 6.725

8.  We're in this Together: Sensation of the Host Cell Environment by Endosymbiotic Bacteria.

Authors:  Cory D Dunn; Tamara Somborac; Bala Anı Akpınar
Journal:  Results Probl Cell Differ       Date:  2020

9.  Structural insight into the role of the PAS domainfor signal transduction in sensor-kinase BvgS.

Authors:  Elian Dupré; Bernard Clantin; Youhua Yuan; Sophie Lecher; Elodie Lesne; Rudy Antoine; Vincent Villeret; Françoise Jacob-Dubuisson
Journal:  J Bacteriol       Date:  2021-02-22       Impact factor: 3.490

10.  Metal-induced sensor mobilization turns on affinity to activate regulator for metal detoxification in live bacteria.

Authors:  Bing Fu; Kushal Sengupta; Lauren A Genova; Ace George Santiago; Won Jung; Łukasz Krzemiński; Udit Kumar Chakraborty; Wenyao Zhang; Peng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-28       Impact factor: 11.205

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