Literature DB >> 21548620

The need for enzymatic steering in abietic acid biosynthesis: gas-phase chemical dynamics simulations of carbocation rearrangements on a bifurcating potential energy surface.

Matthew R Siebert1, Jiaxu Zhang, Srirangam V Addepalli, Dean J Tantillo, William L Hase.   

Abstract

Abietic acid, a constituent of pine resin, is naturally derived from abietadiene --a process that requires four enzymes: one (abietadiene synthase) for conversion of the acyclic, achiral geranylgeranyl diphosphate to the polycyclic, chiral abietadiene (a complex process involving the copalyl diphosphate intermediate) and then three to oxidize a single methyl group of abietadiene to the corresponding carboxylic acid. In previous work (Nature Chem.2009, 1, 384), electronic structure calculations on carbocation rearrangements leading to abietadienyl cation revealed an interesting potential energy surface with a bifurcating reaction pathway (two transition-state structures connected directly with no intervening minimum), which links two products--one natural and one not yet isolated from Nature. Herein we describe direct dynamics simulations of the key step in the formation of abietadiene (in the gas phase and in the absence of the enzyme). The simulations reveal that abietadiene synthase must intervene in order to produce abietadiene selectively, in essence steering this reaction to avoid the generation of byproducts with different molecular architectures.
© 2011 American Chemical Society

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Year:  2011        PMID: 21548620     DOI: 10.1021/ja201730y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  7 in total

Review 1.  Perspective: chemical dynamics simulations of non-statistical reaction dynamics.

Authors:  Xinyou Ma; William L Hase
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-04-28       Impact factor: 4.226

2.  Biosynthetic consequences of multiple sequential post-transition-state bifurcations.

Authors:  Young Joo Hong; Dean J Tantillo
Journal:  Nat Chem       Date:  2014-01-19       Impact factor: 24.427

Review 3.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

4.  Racing carbon atoms. Atomic motion reaction coordinates and structural effects on Newtonian kinetic isotope effects.

Authors:  Ivonne L Andujar-De Sanctis; Daniel A Singleton
Journal:  Org Lett       Date:  2012-10-01       Impact factor: 6.005

5.  Gas-phase reactivity of [Ca(formamide)]2+ complex: an example of different dynamical behaviours.

Authors:  Ana Martin-Somer; Riccardo Spezia; Manuel Yáñez
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-04-28       Impact factor: 4.226

6.  Modulation of inherent dynamical tendencies of the bisabolyl cation via preorganization in epi-isozizaene synthase.

Authors:  Ryan P Pemberton; Krystina C Ho; Dean J Tantillo
Journal:  Chem Sci       Date:  2015-02-02       Impact factor: 9.825

Review 7.  Dynamic behavior of rearranging carbocations - implications for terpene biosynthesis.

Authors:  Stephanie R Hare; Dean J Tantillo
Journal:  Beilstein J Org Chem       Date:  2016-02-29       Impact factor: 2.883

  7 in total

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