Literature DB >> 21528017

Nucleic Acid Charge Transfer: Black, White and Gray.

Ravindra Venkatramani1, Shahar Keinan, Alexander Balaeff, David N Beratan.   

Abstract

Theoretical studies of charge transport in deoxyribonucleic acid (DNA) and peptide nucleic acid (PNA) indicate that structure and dynamics modulate the charge transfer rates, and that different members of a structural ensemble support different charge transport mechanisms. Here, we review the influences of nucleobase geometry, electronic structure, solvent environment, and thermal conformational fluctuations on the charge transfer mechanism. We describe an emerging framework for understanding the diversity of charge transport mechanisms seen in nucleic acids.

Entities:  

Year:  2011        PMID: 21528017      PMCID: PMC3081592          DOI: 10.1016/j.ccr.2010.12.010

Source DB:  PubMed          Journal:  Coord Chem Rev        ISSN: 0010-8545            Impact factor:   22.315


  68 in total

1.  Single-base mismatch detection based on charge transduction through DNA.

Authors:  S O Kelley; E M Boon; J K Barton; N M Jackson; M G Hill
Journal:  Nucleic Acids Res       Date:  1999-12-15       Impact factor: 16.971

2.  Electrical conduction through DNA molecules.

Authors:  H W Fink; C Schönenberger
Journal:  Nature       Date:  1999-04-01       Impact factor: 49.962

3.  Sequence dependence of charge transport properties of DNA.

Authors:  C Nogues; S R Cohen; S Daube; N Apter; R Naaman
Journal:  J Phys Chem B       Date:  2006-05-11       Impact factor: 2.991

4.  Site-specific replacement of a conserved tyrosine in ribonucleotide reductase with an aniline amino acid: a mechanistic probe for a redox-active tyrosine.

Authors:  Michelle C Y Chang; Cyril S Yee; Daniel G Nocera; JoAnne Stubbe
Journal:  J Am Chem Soc       Date:  2004-12-29       Impact factor: 15.419

5.  Crossover from superexchange to hopping as the mechanism for photoinduced charge transfer in DNA hairpin conjugates.

Authors:  Frederick D Lewis; Huihe Zhu; Pierre Daublain; Torsten Fiebig; Milen Raytchev; Qiang Wang; Vladimir Shafirovich
Journal:  J Am Chem Soc       Date:  2006-01-25       Impact factor: 15.419

6.  Can charge transfer in DNA significantly be modulated by varying the pi stack conformation?

Authors:  Alexander A Voityuk
Journal:  J Phys Chem B       Date:  2009-10-29       Impact factor: 2.991

7.  Distance-dependent electron transfer in DNA hairpins.

Authors:  F D Lewis; T Wu; Y Zhang; R L Letsinger; S R Greenfield; M R Wasielewski
Journal:  Science       Date:  1997-08-01       Impact factor: 47.728

8.  Solution structure of a peptide nucleic acid duplex from NMR data: features and limitations.

Authors:  Wei He; Elizabeth Hatcher; Alexander Balaeff; David N Beratan; Roberto R Gil; Marcela Madrid; Catalina Achim
Journal:  J Am Chem Soc       Date:  2008-09-10       Impact factor: 15.419

Review 9.  Steering electrons on moving pathways.

Authors:  David N Beratan; Spiros S Skourtis; Ilya A Balabin; Alexander Balaeff; Shahar Keinan; Ravindra Venkatramani; Dequan Xiao
Journal:  Acc Chem Res       Date:  2009-10-20       Impact factor: 22.384

10.  Getting to guanine: mechanism and dynamics of charge separation and charge recombination in DNA revisited.

Authors:  Frederick D Lewis; Huihe Zhu; Pierre Daublain; Karsten Sigmund; Torsten Fiebig; Milen Raytchev; Qiang Wang; Vladimir Shafirovich
Journal:  Photochem Photobiol Sci       Date:  2008-03-13       Impact factor: 3.982

View more
  18 in total

1.  Mean First-Passage Times in Biology.

Authors:  Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Isr J Chem       Date:  2016-08-05       Impact factor: 3.333

2.  Electron transfer characteristics of 2'-deoxy-2'-fluoro-arabinonucleic acid, a nucleic acid with enhanced chemical stability.

Authors:  Ruijie D Teo; Kiriko Terai; Agostino Migliore; David N Beratan
Journal:  Phys Chem Chem Phys       Date:  2018-09-07       Impact factor: 3.676

3.  Biological charge transfer via flickering resonance.

Authors:  Yuqi Zhang; Chaoren Liu; Alexander Balaeff; Spiros S Skourtis; David N Beratan
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-25       Impact factor: 11.205

Review 4.  Biochemistry and theory of proton-coupled electron transfer.

Authors:  Agostino Migliore; Nicholas F Polizzi; Michael J Therien; David N Beratan
Journal:  Chem Rev       Date:  2014-04-01       Impact factor: 60.622

5.  Engineering nanometre-scale coherence in soft matter.

Authors:  Chaoren Liu; Limin Xiang; Yuqi Zhang; Peng Zhang; David N Beratan; Yueqi Li; Nongjian Tao
Journal:  Nat Chem       Date:  2016-06-20       Impact factor: 24.427

Review 6.  25 years and still going strong: 2'-O-(pyren-1-yl)methylribonucleotides - versatile building blocks for applications in molecular biology, diagnostics and materials science.

Authors:  Patrick J Hrdlicka; Saswata Karmakar
Journal:  Org Biomol Chem       Date:  2017-11-29       Impact factor: 3.876

7.  Assessing Possible Mechanisms of Micrometer-Scale Electron Transfer in Heme-Free Geobacter sulfurreducens Pili.

Authors:  Xuyan Ru; Peng Zhang; David N Beratan
Journal:  J Phys Chem B       Date:  2019-06-10       Impact factor: 2.991

8.  B-DNA to zip-DNA: simulating a DNA transition to a novel structure with enhanced charge-transport characteristics.

Authors:  Alexander Balaeff; Stephen L Craig; David N Beratan
Journal:  J Phys Chem A       Date:  2011-05-20       Impact factor: 2.781

Review 9.  Why Are DNA and Protein Electron Transfer So Different?

Authors:  David N Beratan
Journal:  Annu Rev Phys Chem       Date:  2019-02-06       Impact factor: 12.703

10.  Distance-independent charge recombination kinetics in cytochrome c-cytochrome c peroxidase complexes: compensating changes in the electronic coupling and reorganization energies.

Authors:  Nan Jiang; Aleksey Kuznetsov; Judith M Nocek; Brian M Hoffman; Brian R Crane; Xiangqian Hu; David N Beratan
Journal:  J Phys Chem B       Date:  2013-07-29       Impact factor: 2.991

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.