| Literature DB >> 21522948 |
Hoong-Kun Fun, Madhukar Hemamalini, D Jagadeesh Prasad, Prakash Anil Castelino, V V Anitha.
Abstract
In the title compound, C(14)H(15)N(3)S, the imidazo[2,1-b][1,3,4]thia-diazole fused-ring system is close to planar, with a maximum deviation of 0.042 (1) Å, and the dihedral angle between it and the phenyl ring is 24.21 (6)°. The isobutyl group is disordered over two sets of sites in a 0.899 (9):0.101 (9) ratio. In the crystal, weak aromatic π-π stacking inter-actions involving the imidazole and thia-diazole rings with a centroid-centroid distance of 3.8067 (7) Å occur.Entities:
Year: 2011 PMID: 21522948 PMCID: PMC3051612 DOI: 10.1107/S1600536810053201
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H15N3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 9875 reflections |
| θ = 2.7–30.3° | |
| µ = 0.22 mm−1 | |
| β = 96.127 (1)° | Block, yellow |
| 0.65 × 0.48 × 0.25 mm | |
| Bruker SMART APEXII CCD diffractometer | 4038 independent reflections |
| Radiation source: fine-focus sealed tube | 3378 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.1°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 36499 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4038 reflections | (Δ/σ)max = 0.001 |
| 191 parameters | Δρmax = 0.31 e Å−3 |
| 3 restraints | Δρmin = −0.30 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Occ. (<1) | |||||
| S1 | −0.10652 (5) | 0.001167 (15) | 0.83286 (3) | 0.04296 (11) | |
| N1 | −0.09710 (16) | 0.12234 (5) | 0.96090 (8) | 0.0375 (2) | |
| N2 | 0.23227 (16) | 0.07221 (5) | 0.91884 (8) | 0.0369 (2) | |
| N3 | 0.34801 (18) | 0.02027 (5) | 0.87202 (9) | 0.0412 (2) | |
| C1 | −0.1245 (2) | 0.25685 (7) | 1.06391 (14) | 0.0544 (3) | |
| H1A | −0.2492 | 0.2450 | 1.0125 | 0.065* | |
| C2 | −0.1425 (3) | 0.31387 (9) | 1.12942 (17) | 0.0724 (5) | |
| H2A | −0.2792 | 0.3401 | 1.1213 | 0.087* | |
| C3 | 0.0404 (3) | 0.33173 (9) | 1.20606 (16) | 0.0731 (5) | |
| H3A | 0.0269 | 0.3697 | 1.2498 | 0.088* | |
| C4 | 0.2424 (3) | 0.29331 (9) | 1.21764 (14) | 0.0688 (4) | |
| H4A | 0.3664 | 0.3055 | 1.2691 | 0.083* | |
| C5 | 0.2629 (3) | 0.23646 (8) | 1.15317 (12) | 0.0540 (3) | |
| H5A | 0.4005 | 0.2106 | 1.1620 | 0.065* | |
| C6 | 0.0797 (2) | 0.21756 (6) | 1.07525 (10) | 0.0395 (2) | |
| C7 | 0.10261 (19) | 0.15721 (6) | 1.00717 (9) | 0.0361 (2) | |
| C8 | −0.00847 (18) | 0.07150 (6) | 0.90932 (9) | 0.0346 (2) | |
| C9 | 0.1913 (2) | −0.02035 (6) | 0.82471 (10) | 0.0387 (2) | |
| C10 | 0.3078 (2) | 0.12707 (6) | 0.98180 (10) | 0.0406 (3) | |
| H10A | 0.4625 | 0.1408 | 1.0026 | 0.049* | |
| C11 | 0.2544 (2) | −0.08474 (6) | 0.77025 (11) | 0.0456 (3) | |
| H11A | 0.1916 | −0.1229 | 0.8079 | 0.055* | 0.899 (9) |
| H11B | 0.4251 | −0.0891 | 0.7778 | 0.055* | 0.899 (9) |
| H11C | 0.1818 | −0.1211 | 0.8065 | 0.055* | 0.101 (9) |
| H11D | 0.4220 | −0.0903 | 0.7866 | 0.055* | 0.101 (9) |
| C12 | 0.1633 (7) | −0.08944 (18) | 0.6491 (3) | 0.0618 (9) | 0.899 (9) |
| H12A | −0.0066 | −0.0798 | 0.6399 | 0.074* | 0.899 (9) |
| C13 | 0.2898 (12) | −0.03784 (19) | 0.5858 (3) | 0.1205 (16) | 0.899 (9) |
| H13A | 0.2567 | 0.0071 | 0.6105 | 0.181* | 0.899 (9) |
| H13B | 0.2362 | −0.0418 | 0.5098 | 0.181* | 0.899 (9) |
| H13C | 0.4569 | −0.0460 | 0.5970 | 0.181* | 0.899 (9) |
| C14 | 0.2053 (8) | −0.16347 (16) | 0.6126 (3) | 0.0948 (11) | 0.899 (9) |
| H14A | 0.1100 | −0.1940 | 0.6500 | 0.142* | 0.899 (9) |
| H14B | 0.3690 | −0.1750 | 0.6295 | 0.142* | 0.899 (9) |
| H14C | 0.1629 | −0.1673 | 0.5355 | 0.142* | 0.899 (9) |
| C12A | 0.205 (7) | −0.0960 (19) | 0.666 (2) | 0.081 (12) | 0.101 (9) |
| H12B | 0.0650 | −0.1245 | 0.6708 | 0.097* | 0.101 (9) |
| C13A | 0.096 (9) | −0.0463 (17) | 0.583 (3) | 0.122 (14) | 0.101 (9) |
| H13D | 0.0313 | −0.0705 | 0.5196 | 0.182* | 0.101 (9) |
| H13E | 0.2154 | −0.0152 | 0.5641 | 0.182* | 0.101 (9) |
| H13F | −0.0266 | −0.0214 | 0.6131 | 0.182* | 0.101 (9) |
| C14A | 0.347 (8) | −0.147 (2) | 0.601 (2) | 0.119 (13) | 0.101 (9) |
| H14D | 0.2895 | −0.1445 | 0.5251 | 0.179* | 0.101 (9) |
| H14E | 0.3267 | −0.1923 | 0.6271 | 0.179* | 0.101 (9) |
| H14F | 0.5114 | −0.1350 | 0.6105 | 0.179* | 0.101 (9) |
| S1 | 0.03290 (16) | 0.04292 (18) | 0.0523 (2) | 0.00072 (10) | 0.00121 (12) | −0.00946 (12) |
| N1 | 0.0321 (4) | 0.0376 (5) | 0.0430 (5) | 0.0029 (4) | 0.0052 (4) | −0.0013 (4) |
| N2 | 0.0301 (4) | 0.0383 (5) | 0.0433 (5) | 0.0006 (3) | 0.0085 (3) | −0.0043 (4) |
| N3 | 0.0344 (5) | 0.0421 (5) | 0.0484 (6) | 0.0028 (4) | 0.0112 (4) | −0.0066 (4) |
| C1 | 0.0432 (7) | 0.0453 (7) | 0.0753 (9) | 0.0023 (5) | 0.0096 (6) | −0.0114 (6) |
| C2 | 0.0595 (9) | 0.0530 (8) | 0.1081 (14) | 0.0077 (7) | 0.0254 (9) | −0.0217 (9) |
| C3 | 0.0771 (11) | 0.0602 (9) | 0.0865 (12) | −0.0070 (8) | 0.0290 (9) | −0.0330 (9) |
| C4 | 0.0735 (11) | 0.0698 (10) | 0.0628 (9) | −0.0057 (8) | 0.0062 (8) | −0.0265 (8) |
| C5 | 0.0543 (8) | 0.0548 (8) | 0.0522 (7) | 0.0028 (6) | 0.0029 (6) | −0.0118 (6) |
| C6 | 0.0416 (6) | 0.0358 (5) | 0.0426 (6) | −0.0016 (4) | 0.0116 (5) | −0.0015 (4) |
| C7 | 0.0354 (5) | 0.0351 (5) | 0.0383 (5) | −0.0004 (4) | 0.0068 (4) | 0.0000 (4) |
| C8 | 0.0297 (5) | 0.0364 (5) | 0.0378 (5) | 0.0012 (4) | 0.0038 (4) | 0.0004 (4) |
| C9 | 0.0371 (5) | 0.0393 (5) | 0.0403 (6) | 0.0034 (4) | 0.0077 (4) | −0.0009 (4) |
| C10 | 0.0328 (5) | 0.0413 (6) | 0.0482 (6) | −0.0040 (4) | 0.0071 (4) | −0.0070 (5) |
| C11 | 0.0472 (6) | 0.0403 (6) | 0.0503 (7) | 0.0036 (5) | 0.0107 (5) | −0.0065 (5) |
| C12 | 0.0621 (18) | 0.0715 (19) | 0.0501 (12) | 0.0138 (12) | −0.0009 (11) | −0.0205 (13) |
| C13 | 0.182 (5) | 0.123 (3) | 0.0616 (15) | −0.005 (3) | 0.037 (2) | 0.0168 (16) |
| C14 | 0.104 (2) | 0.0893 (19) | 0.0898 (18) | 0.0083 (16) | 0.0063 (16) | −0.0506 (15) |
| C12A | 0.049 (13) | 0.082 (17) | 0.11 (3) | 0.033 (11) | −0.001 (12) | 0.044 (17) |
| C13A | 0.15 (4) | 0.12 (3) | 0.088 (19) | −0.01 (2) | 0.00 (2) | −0.037 (19) |
| C14A | 0.15 (3) | 0.14 (3) | 0.070 (14) | −0.02 (2) | 0.020 (18) | −0.055 (16) |
| S1—C8 | 1.7324 (11) | C11—C12 | 1.534 (3) |
| S1—C9 | 1.7605 (12) | C11—H11A | 0.9700 |
| N1—C8 | 1.3142 (14) | C11—H11B | 0.9700 |
| N1—C7 | 1.3963 (15) | C11—H11C | 0.9600 |
| N2—C8 | 1.3629 (14) | C11—H11D | 0.9600 |
| N2—C10 | 1.3714 (15) | C12—C13 | 1.509 (5) |
| N2—N3 | 1.3753 (13) | C12—C14 | 1.549 (4) |
| N3—C9 | 1.2895 (16) | C12—H12A | 0.9800 |
| C1—C6 | 1.3894 (18) | C13—H13A | 0.9600 |
| C1—C2 | 1.392 (2) | C13—H13B | 0.9600 |
| C1—H1A | 0.9300 | C13—H13C | 0.9600 |
| C2—C3 | 1.376 (3) | C14—H14A | 0.9600 |
| C2—H2A | 0.9300 | C14—H14B | 0.9600 |
| C3—C4 | 1.370 (3) | C14—H14C | 0.9600 |
| C3—H3A | 0.9300 | C12A—C13A | 1.501 (18) |
| C4—C5 | 1.384 (2) | C12A—C14A | 1.563 (18) |
| C4—H4A | 0.9300 | C12A—H12B | 0.9800 |
| C5—C6 | 1.3925 (19) | C13A—H13D | 0.9600 |
| C5—H5A | 0.9300 | C13A—H13E | 0.9600 |
| C6—C7 | 1.4678 (16) | C13A—H13F | 0.9600 |
| C7—C10 | 1.3753 (15) | C14A—H14D | 0.9600 |
| C9—C11 | 1.4946 (16) | C14A—H14E | 0.9600 |
| C10—H10A | 0.9300 | C14A—H14F | 0.9600 |
| C11—C12A | 1.30 (3) | ||
| C8—S1—C9 | 88.09 (5) | C12A—C11—H11C | 106.0 |
| C8—N1—C7 | 103.51 (9) | C9—C11—H11C | 106.5 |
| C8—N2—C10 | 107.97 (9) | C12—C11—H11C | 107.0 |
| C8—N2—N3 | 118.59 (9) | H11B—C11—H11C | 111.4 |
| C10—N2—N3 | 133.36 (10) | C12A—C11—H11D | 107.0 |
| C9—N3—N2 | 108.10 (9) | C9—C11—H11D | 106.5 |
| C6—C1—C2 | 120.06 (15) | C12—C11—H11D | 115.0 |
| C6—C1—H1A | 120.0 | H11A—C11—H11D | 102.7 |
| C2—C1—H1A | 120.0 | H11C—C11—H11D | 106.5 |
| C3—C2—C1 | 120.55 (16) | C13—C12—C11 | 109.6 (3) |
| C3—C2—H2A | 119.7 | C13—C12—C14 | 112.5 (3) |
| C1—C2—H2A | 119.7 | C11—C12—C14 | 107.1 (3) |
| C4—C3—C2 | 119.75 (15) | C13—C12—H12A | 109.2 |
| C4—C3—H3A | 120.1 | C11—C12—H12A | 109.2 |
| C2—C3—H3A | 120.1 | C14—C12—H12A | 109.2 |
| C3—C4—C5 | 120.38 (16) | C12—C13—H13A | 109.5 |
| C3—C4—H4A | 119.8 | C12—C13—H13B | 109.5 |
| C5—C4—H4A | 119.8 | H13A—C13—H13B | 109.5 |
| C4—C5—C6 | 120.69 (14) | C12—C13—H13C | 109.5 |
| C4—C5—H5A | 119.7 | H13A—C13—H13C | 109.5 |
| C6—C5—H5A | 119.7 | H13B—C13—H13C | 109.5 |
| C1—C6—C5 | 118.57 (12) | C12—C14—H14A | 109.5 |
| C1—C6—C7 | 121.03 (12) | C12—C14—H14B | 109.5 |
| C5—C6—C7 | 120.40 (11) | H14A—C14—H14B | 109.5 |
| C10—C7—N1 | 111.69 (10) | C12—C14—H14C | 109.5 |
| C10—C7—C6 | 127.46 (11) | H14A—C14—H14C | 109.5 |
| N1—C7—C6 | 120.84 (10) | H14B—C14—H14C | 109.5 |
| N1—C8—N2 | 112.63 (10) | C11—C12A—C13A | 126 (2) |
| N1—C8—S1 | 138.83 (9) | C11—C12A—C14A | 123 (2) |
| N2—C8—S1 | 108.52 (8) | C13A—C12A—C14A | 105 (2) |
| N3—C9—C11 | 122.70 (11) | C11—C12A—H12B | 97.6 |
| N3—C9—S1 | 116.69 (9) | C13A—C12A—H12B | 97.6 |
| C11—C9—S1 | 120.53 (9) | C14A—C12A—H12B | 97.6 |
| N2—C10—C7 | 104.19 (10) | C12A—C13A—H13D | 109.5 |
| N2—C10—H10A | 127.9 | C12A—C13A—H13E | 109.5 |
| C7—C10—H10A | 127.9 | H13D—C13A—H13E | 109.5 |
| C12A—C11—C9 | 123.4 (13) | C12A—C13A—H13F | 109.5 |
| C9—C11—C12 | 114.71 (15) | H13D—C13A—H13F | 109.5 |
| C12A—C11—H11A | 106.9 | H13E—C13A—H13F | 109.5 |
| C9—C11—H11A | 108.6 | C12A—C14A—H14D | 109.5 |
| C12—C11—H11A | 108.6 | C12A—C14A—H14E | 109.5 |
| C12A—C11—H11B | 100.8 | H14D—C14A—H14E | 109.5 |
| C9—C11—H11B | 108.6 | C12A—C14A—H14F | 109.5 |
| C12—C11—H11B | 108.6 | H14D—C14A—H14F | 109.5 |
| H11A—C11—H11B | 107.6 | H14E—C14A—H14F | 109.5 |
| C8—N2—N3—C9 | 0.80 (15) | C9—S1—C8—N1 | −177.43 (13) |
| C10—N2—N3—C9 | 177.01 (12) | C9—S1—C8—N2 | 1.10 (9) |
| C6—C1—C2—C3 | −0.3 (3) | N2—N3—C9—C11 | −176.63 (11) |
| C1—C2—C3—C4 | 0.3 (3) | N2—N3—C9—S1 | 0.17 (13) |
| C2—C3—C4—C5 | −0.4 (3) | C8—S1—C9—N3 | −0.77 (10) |
| C3—C4—C5—C6 | 0.3 (3) | C8—S1—C9—C11 | 176.10 (10) |
| C2—C1—C6—C5 | 0.2 (2) | C8—N2—C10—C7 | −0.12 (13) |
| C2—C1—C6—C7 | 179.96 (14) | N3—N2—C10—C7 | −176.62 (12) |
| C4—C5—C6—C1 | −0.2 (2) | N1—C7—C10—N2 | −0.26 (13) |
| C4—C5—C6—C7 | −179.99 (13) | C6—C7—C10—N2 | 178.61 (11) |
| C8—N1—C7—C10 | 0.54 (13) | N3—C9—C11—C12A | −117 (2) |
| C8—N1—C7—C6 | −178.42 (10) | S1—C9—C11—C12A | 66 (2) |
| C1—C6—C7—C10 | 156.55 (13) | N3—C9—C11—C12 | −121.5 (2) |
| C5—C6—C7—C10 | −23.69 (19) | S1—C9—C11—C12 | 61.8 (2) |
| C1—C6—C7—N1 | −24.67 (17) | C12A—C11—C12—C13 | −89 (14) |
| C5—C6—C7—N1 | 155.09 (12) | C9—C11—C12—C13 | 67.7 (4) |
| C7—N1—C8—N2 | −0.62 (13) | C12A—C11—C12—C14 | 33 (13) |
| C7—N1—C8—S1 | 177.88 (11) | C9—C11—C12—C14 | −170.0 (2) |
| C10—N2—C8—N1 | 0.49 (13) | C9—C11—C12A—C13A | 5(6) |
| N3—N2—C8—N1 | 177.59 (10) | C12—C11—C12A—C13A | 30 (10) |
| C10—N2—C8—S1 | −178.47 (8) | C9—C11—C12A—C14A | 155 (3) |
| N3—N2—C8—S1 | −1.36 (13) |