Literature DB >> 21522948

2-Isobutyl-6-phenyl-imidazo[2,1-b][1,3,4]thia-diazole.

Hoong-Kun Fun, Madhukar Hemamalini, D Jagadeesh Prasad, Prakash Anil Castelino, V V Anitha.   

Abstract

In the title compound, C(14)H(15)N(3)S, the imidazo[2,1-b][1,3,4]thia-diazole fused-ring system is close to planar, with a maximum deviation of 0.042 (1) Å, and the dihedral angle between it and the phenyl ring is 24.21 (6)°. The isobutyl group is disordered over two sets of sites in a 0.899 (9):0.101 (9) ratio. In the crystal, weak aromatic π-π stacking inter-actions involving the imidazole and thia-diazole rings with a centroid-centroid distance of 3.8067 (7) Å occur.

Entities:  

Year:  2011        PMID: 21522948      PMCID: PMC3051612          DOI: 10.1107/S1600536810053201

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of imidazo [2,1-b]-1,3,4-thia­diazole derivatives, see: Terzioglu & Gursoy (2003 ▶); Kolavi et al. (2006 ▶); Gadad et al. (2000 ▶); Andotra et al. (1997 ▶); Khazi et al. (1996 ▶); Andreani et al. (1982 ▶, 1987 ▶, 1991 ▶); Eberle & Robert (1977 ▶).

Experimental

Crystal data

C14H15N3S M = 257.35 Monoclinic, a = 5.6921 (1) Å b = 19.6453 (4) Å c = 12.3610 (2) Å β = 96.127 (1)° V = 1374.35 (4) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 296 K 0.65 × 0.48 × 0.25 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009) ▶ T min = 0.870, T max = 0.947 36499 measured reflections 4038 independent reflections 3378 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.115 S = 1.03 4038 reflections 191 parameters 3 restraints H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810053201/hb5776sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810053201/hb5776Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H15N3SF(000) = 544
Mr = 257.35Dx = 1.244 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 9875 reflections
a = 5.6921 (1) Åθ = 2.7–30.3°
b = 19.6453 (4) ŵ = 0.22 mm1
c = 12.3610 (2) ÅT = 296 K
β = 96.127 (1)°Block, yellow
V = 1374.35 (4) Å30.65 × 0.48 × 0.25 mm
Z = 4
Bruker SMART APEXII CCD diffractometer4038 independent reflections
Radiation source: fine-focus sealed tube3378 reflections with I > 2σ(I)
graphiteRint = 0.028
φ and ω scansθmax = 30.1°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −8→8
Tmin = 0.870, Tmax = 0.947k = −27→27
36499 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0607P)2 + 0.2698P] where P = (Fo2 + 2Fc2)/3
4038 reflections(Δ/σ)max = 0.001
191 parametersΔρmax = 0.31 e Å3
3 restraintsΔρmin = −0.30 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S1−0.10652 (5)0.001167 (15)0.83286 (3)0.04296 (11)
N1−0.09710 (16)0.12234 (5)0.96090 (8)0.0375 (2)
N20.23227 (16)0.07221 (5)0.91884 (8)0.0369 (2)
N30.34801 (18)0.02027 (5)0.87202 (9)0.0412 (2)
C1−0.1245 (2)0.25685 (7)1.06391 (14)0.0544 (3)
H1A−0.24920.24501.01250.065*
C2−0.1425 (3)0.31387 (9)1.12942 (17)0.0724 (5)
H2A−0.27920.34011.12130.087*
C30.0404 (3)0.33173 (9)1.20606 (16)0.0731 (5)
H3A0.02690.36971.24980.088*
C40.2424 (3)0.29331 (9)1.21764 (14)0.0688 (4)
H4A0.36640.30551.26910.083*
C50.2629 (3)0.23646 (8)1.15317 (12)0.0540 (3)
H5A0.40050.21061.16200.065*
C60.0797 (2)0.21756 (6)1.07525 (10)0.0395 (2)
C70.10261 (19)0.15721 (6)1.00717 (9)0.0361 (2)
C8−0.00847 (18)0.07150 (6)0.90932 (9)0.0346 (2)
C90.1913 (2)−0.02035 (6)0.82471 (10)0.0387 (2)
C100.3078 (2)0.12707 (6)0.98180 (10)0.0406 (3)
H10A0.46250.14081.00260.049*
C110.2544 (2)−0.08474 (6)0.77025 (11)0.0456 (3)
H11A0.1916−0.12290.80790.055*0.899 (9)
H11B0.4251−0.08910.77780.055*0.899 (9)
H11C0.1818−0.12110.80650.055*0.101 (9)
H11D0.4220−0.09030.78660.055*0.101 (9)
C120.1633 (7)−0.08944 (18)0.6491 (3)0.0618 (9)0.899 (9)
H12A−0.0066−0.07980.63990.074*0.899 (9)
C130.2898 (12)−0.03784 (19)0.5858 (3)0.1205 (16)0.899 (9)
H13A0.25670.00710.61050.181*0.899 (9)
H13B0.2362−0.04180.50980.181*0.899 (9)
H13C0.4569−0.04600.59700.181*0.899 (9)
C140.2053 (8)−0.16347 (16)0.6126 (3)0.0948 (11)0.899 (9)
H14A0.1100−0.19400.65000.142*0.899 (9)
H14B0.3690−0.17500.62950.142*0.899 (9)
H14C0.1629−0.16730.53550.142*0.899 (9)
C12A0.205 (7)−0.0960 (19)0.666 (2)0.081 (12)0.101 (9)
H12B0.0650−0.12450.67080.097*0.101 (9)
C13A0.096 (9)−0.0463 (17)0.583 (3)0.122 (14)0.101 (9)
H13D0.0313−0.07050.51960.182*0.101 (9)
H13E0.2154−0.01520.56410.182*0.101 (9)
H13F−0.0266−0.02140.61310.182*0.101 (9)
C14A0.347 (8)−0.147 (2)0.601 (2)0.119 (13)0.101 (9)
H14D0.2895−0.14450.52510.179*0.101 (9)
H14E0.3267−0.19230.62710.179*0.101 (9)
H14F0.5114−0.13500.61050.179*0.101 (9)
U11U22U33U12U13U23
S10.03290 (16)0.04292 (18)0.0523 (2)0.00072 (10)0.00121 (12)−0.00946 (12)
N10.0321 (4)0.0376 (5)0.0430 (5)0.0029 (4)0.0052 (4)−0.0013 (4)
N20.0301 (4)0.0383 (5)0.0433 (5)0.0006 (3)0.0085 (3)−0.0043 (4)
N30.0344 (5)0.0421 (5)0.0484 (6)0.0028 (4)0.0112 (4)−0.0066 (4)
C10.0432 (7)0.0453 (7)0.0753 (9)0.0023 (5)0.0096 (6)−0.0114 (6)
C20.0595 (9)0.0530 (8)0.1081 (14)0.0077 (7)0.0254 (9)−0.0217 (9)
C30.0771 (11)0.0602 (9)0.0865 (12)−0.0070 (8)0.0290 (9)−0.0330 (9)
C40.0735 (11)0.0698 (10)0.0628 (9)−0.0057 (8)0.0062 (8)−0.0265 (8)
C50.0543 (8)0.0548 (8)0.0522 (7)0.0028 (6)0.0029 (6)−0.0118 (6)
C60.0416 (6)0.0358 (5)0.0426 (6)−0.0016 (4)0.0116 (5)−0.0015 (4)
C70.0354 (5)0.0351 (5)0.0383 (5)−0.0004 (4)0.0068 (4)0.0000 (4)
C80.0297 (5)0.0364 (5)0.0378 (5)0.0012 (4)0.0038 (4)0.0004 (4)
C90.0371 (5)0.0393 (5)0.0403 (6)0.0034 (4)0.0077 (4)−0.0009 (4)
C100.0328 (5)0.0413 (6)0.0482 (6)−0.0040 (4)0.0071 (4)−0.0070 (5)
C110.0472 (6)0.0403 (6)0.0503 (7)0.0036 (5)0.0107 (5)−0.0065 (5)
C120.0621 (18)0.0715 (19)0.0501 (12)0.0138 (12)−0.0009 (11)−0.0205 (13)
C130.182 (5)0.123 (3)0.0616 (15)−0.005 (3)0.037 (2)0.0168 (16)
C140.104 (2)0.0893 (19)0.0898 (18)0.0083 (16)0.0063 (16)−0.0506 (15)
C12A0.049 (13)0.082 (17)0.11 (3)0.033 (11)−0.001 (12)0.044 (17)
C13A0.15 (4)0.12 (3)0.088 (19)−0.01 (2)0.00 (2)−0.037 (19)
C14A0.15 (3)0.14 (3)0.070 (14)−0.02 (2)0.020 (18)−0.055 (16)
S1—C81.7324 (11)C11—C121.534 (3)
S1—C91.7605 (12)C11—H11A0.9700
N1—C81.3142 (14)C11—H11B0.9700
N1—C71.3963 (15)C11—H11C0.9600
N2—C81.3629 (14)C11—H11D0.9600
N2—C101.3714 (15)C12—C131.509 (5)
N2—N31.3753 (13)C12—C141.549 (4)
N3—C91.2895 (16)C12—H12A0.9800
C1—C61.3894 (18)C13—H13A0.9600
C1—C21.392 (2)C13—H13B0.9600
C1—H1A0.9300C13—H13C0.9600
C2—C31.376 (3)C14—H14A0.9600
C2—H2A0.9300C14—H14B0.9600
C3—C41.370 (3)C14—H14C0.9600
C3—H3A0.9300C12A—C13A1.501 (18)
C4—C51.384 (2)C12A—C14A1.563 (18)
C4—H4A0.9300C12A—H12B0.9800
C5—C61.3925 (19)C13A—H13D0.9600
C5—H5A0.9300C13A—H13E0.9600
C6—C71.4678 (16)C13A—H13F0.9600
C7—C101.3753 (15)C14A—H14D0.9600
C9—C111.4946 (16)C14A—H14E0.9600
C10—H10A0.9300C14A—H14F0.9600
C11—C12A1.30 (3)
C8—S1—C988.09 (5)C12A—C11—H11C106.0
C8—N1—C7103.51 (9)C9—C11—H11C106.5
C8—N2—C10107.97 (9)C12—C11—H11C107.0
C8—N2—N3118.59 (9)H11B—C11—H11C111.4
C10—N2—N3133.36 (10)C12A—C11—H11D107.0
C9—N3—N2108.10 (9)C9—C11—H11D106.5
C6—C1—C2120.06 (15)C12—C11—H11D115.0
C6—C1—H1A120.0H11A—C11—H11D102.7
C2—C1—H1A120.0H11C—C11—H11D106.5
C3—C2—C1120.55 (16)C13—C12—C11109.6 (3)
C3—C2—H2A119.7C13—C12—C14112.5 (3)
C1—C2—H2A119.7C11—C12—C14107.1 (3)
C4—C3—C2119.75 (15)C13—C12—H12A109.2
C4—C3—H3A120.1C11—C12—H12A109.2
C2—C3—H3A120.1C14—C12—H12A109.2
C3—C4—C5120.38 (16)C12—C13—H13A109.5
C3—C4—H4A119.8C12—C13—H13B109.5
C5—C4—H4A119.8H13A—C13—H13B109.5
C4—C5—C6120.69 (14)C12—C13—H13C109.5
C4—C5—H5A119.7H13A—C13—H13C109.5
C6—C5—H5A119.7H13B—C13—H13C109.5
C1—C6—C5118.57 (12)C12—C14—H14A109.5
C1—C6—C7121.03 (12)C12—C14—H14B109.5
C5—C6—C7120.40 (11)H14A—C14—H14B109.5
C10—C7—N1111.69 (10)C12—C14—H14C109.5
C10—C7—C6127.46 (11)H14A—C14—H14C109.5
N1—C7—C6120.84 (10)H14B—C14—H14C109.5
N1—C8—N2112.63 (10)C11—C12A—C13A126 (2)
N1—C8—S1138.83 (9)C11—C12A—C14A123 (2)
N2—C8—S1108.52 (8)C13A—C12A—C14A105 (2)
N3—C9—C11122.70 (11)C11—C12A—H12B97.6
N3—C9—S1116.69 (9)C13A—C12A—H12B97.6
C11—C9—S1120.53 (9)C14A—C12A—H12B97.6
N2—C10—C7104.19 (10)C12A—C13A—H13D109.5
N2—C10—H10A127.9C12A—C13A—H13E109.5
C7—C10—H10A127.9H13D—C13A—H13E109.5
C12A—C11—C9123.4 (13)C12A—C13A—H13F109.5
C9—C11—C12114.71 (15)H13D—C13A—H13F109.5
C12A—C11—H11A106.9H13E—C13A—H13F109.5
C9—C11—H11A108.6C12A—C14A—H14D109.5
C12—C11—H11A108.6C12A—C14A—H14E109.5
C12A—C11—H11B100.8H14D—C14A—H14E109.5
C9—C11—H11B108.6C12A—C14A—H14F109.5
C12—C11—H11B108.6H14D—C14A—H14F109.5
H11A—C11—H11B107.6H14E—C14A—H14F109.5
C8—N2—N3—C90.80 (15)C9—S1—C8—N1−177.43 (13)
C10—N2—N3—C9177.01 (12)C9—S1—C8—N21.10 (9)
C6—C1—C2—C3−0.3 (3)N2—N3—C9—C11−176.63 (11)
C1—C2—C3—C40.3 (3)N2—N3—C9—S10.17 (13)
C2—C3—C4—C5−0.4 (3)C8—S1—C9—N3−0.77 (10)
C3—C4—C5—C60.3 (3)C8—S1—C9—C11176.10 (10)
C2—C1—C6—C50.2 (2)C8—N2—C10—C7−0.12 (13)
C2—C1—C6—C7179.96 (14)N3—N2—C10—C7−176.62 (12)
C4—C5—C6—C1−0.2 (2)N1—C7—C10—N2−0.26 (13)
C4—C5—C6—C7−179.99 (13)C6—C7—C10—N2178.61 (11)
C8—N1—C7—C100.54 (13)N3—C9—C11—C12A−117 (2)
C8—N1—C7—C6−178.42 (10)S1—C9—C11—C12A66 (2)
C1—C6—C7—C10156.55 (13)N3—C9—C11—C12−121.5 (2)
C5—C6—C7—C10−23.69 (19)S1—C9—C11—C1261.8 (2)
C1—C6—C7—N1−24.67 (17)C12A—C11—C12—C13−89 (14)
C5—C6—C7—N1155.09 (12)C9—C11—C12—C1367.7 (4)
C7—N1—C8—N2−0.62 (13)C12A—C11—C12—C1433 (13)
C7—N1—C8—S1177.88 (11)C9—C11—C12—C14−170.0 (2)
C10—N2—C8—N10.49 (13)C9—C11—C12A—C13A5(6)
N3—N2—C8—N1177.59 (10)C12—C11—C12A—C13A30 (10)
C10—N2—C8—S1−178.47 (8)C9—C11—C12A—C14A155 (3)
N3—N2—C8—S1−1.36 (13)
  6 in total

1.  Synthesis, anticonvulsant and analgesic activities of some 6-substituted imidazo(2,1-b)-1,3,4-thiadiazole-2-sulfonamides and their 5-bromo derivatives.

Authors:  I A Khazi; C S Mahajanshetti; A K Gadad; A D Tarnalli; C M Sultanpur
Journal:  Arzneimittelforschung       Date:  1996-10

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and antibacterial activity of some 5-guanylhydrazone/thiocyanato-6-arylimidazo[2,1-b]-1,3, 4-thiadiazole-2-sulfonamide derivatives.

Authors:  A K Gadad; C S Mahajanshetti; S Nimbalkar; A Raichurkar
Journal:  Eur J Med Chem       Date:  2000-09       Impact factor: 6.514

4.  Synthesis and evaluation of antitubercular activity of imidazo[2,1-b][1,3,4]thiadiazole derivatives.

Authors:  Gundurao Kolavi; Vinayak Hegde; Imtiyaz ahmed Khazi; Pramod Gadad
Journal:  Bioorg Med Chem       Date:  2006-01-06       Impact factor: 3.641

5.  Synthesis and anticancer evaluation of some new hydrazone derivatives of 2,6-dimethylimidazo[2,1-b][1,3,4]thiadiazole-5-carbohydrazide.

Authors:  Nalan Terzioglu; Aysel Gürsoy
Journal:  Eur J Med Chem       Date:  2003 Jul-Aug       Impact factor: 6.514

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total
  2 in total

1.  2-Isobutyl-6-(4-meth-oxy-phen-yl)imidazo[2,1-b][1,3,4]thia-diazole.

Authors:  Hoong-Kun Fun; Chin Sing Yeap; D Jagadeesh Prasad; Prakash Anil Castelino; V V Anitha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-08

2.  2-(2,4-Dichloro-phen-oxy-meth-yl)-5-(4-methyl-phen-yl)imidazo[2,1-b][1,3,4]thia-diazole.

Authors:  Bakr F Abdel-Wahab; Hanan A Mohamed; Seik Weng Ng; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-02-13
  2 in total

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