Literature DB >> 21522756

3-(5-Methyl-3-phenyl-1H-pyrazol-1-yl)propanamide monohydrate.

Shu-Jiao Chen1, Jian-Feng Zhang.   

Abstract

In the title compound, C(13)H(15)N(3)O·H(2)O, the dihedral angle between the n class="Chemical">pyrazole and benzene rings is 26.6 (2)° and the N-C-C-C torsion angle is 153.6 (3)°. In the crystal, adjacent mol-ecules are linked by N-H⋯N, N-H⋯O and O-H⋯O hydrogen bonds into a network structure running along the a axis.

Entities:  

Year:  2010        PMID: 21522756      PMCID: PMC3050230          DOI: 10.1107/S160053681005035X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential applications of substituted pyrazole derivatives as ligands, see: Shaw et al. (2004 ▶;) n class="Gene">Pal et al. (2005 ▶). For the design and synthesis of various pyrazole ligands with special structural properties to fulfill the stereochemical requirements of the metal-binding sites, see: Bell et al. (2003 ▶); Paul et al. (2004 ▶) For pyrazole ligands with propanamide side-chains, see: Huang et al. (2009 ▶); Zhang et al. (2009 ▶).

Experimental

Crystal data

C13H15N3O·n class="Chemical">H2O M = 247.30 Orthorhombic, a = 6.5482 (13) Å b = 12.609 (3) Å c = 16.606 (3) Å V = 1371.1 (5) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.45 × 0.23 × 0.12 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.977, T max = 0.990 13414 measured reflections 1815 independent reflections 1323 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.140 S = 1.08 1815 reflections 164 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.16 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998) ▶; cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681005035X/im2245sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681005035X/im2245Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H15N3O·H2OF(000) = 528
Mr = 247.30Dx = 1.198 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 13460 reflections
a = 6.5482 (13) Åθ = 3.2–27.4°
b = 12.609 (3) ŵ = 0.08 mm1
c = 16.606 (3) ÅT = 296 K
V = 1371.1 (5) Å3Chip, colorless
Z = 40.45 × 0.23 × 0.12 mm
Rigaku R-AXIS RAPID diffractometer1815 independent reflections
Radiation source: fine-focus sealed tube1323 reflections with I > 2σ(I)
graphiteRint = 0.056
ω scansθmax = 27.4°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −8→7
Tmin = 0.977, Tmax = 0.990k = −16→16
13414 measured reflectionsl = −21→21
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.050H-atom parameters constrained
wR(F2) = 0.140w = 1/[σ2(Fo2) + (0.0693P)2 + 0.2276P] where P = (Fo2 + 2Fc2)/3
S = 1.08(Δ/σ)max = 0.001
1815 reflectionsΔρmax = 0.23 e Å3
164 parametersΔρmin = −0.16 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.048 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.1503 (3)0.37278 (16)0.44426 (14)0.0598 (6)
N30.6165 (4)0.63188 (17)0.33836 (14)0.0455 (6)
N20.4723 (4)0.58241 (16)0.29243 (14)0.0456 (6)
C70.7043 (4)0.7022 (2)0.28840 (17)0.0432 (6)
C10.0612 (4)0.4538 (2)0.42065 (18)0.0451 (7)
C30.3511 (4)0.4985 (2)0.32841 (19)0.0505 (7)
H3A0.43820.45540.36250.061*
H3B0.29760.45340.28610.061*
N1−0.1361 (4)0.4692 (2)0.43135 (16)0.0572 (7)
H1A−0.20840.42200.45560.069*
H1B−0.19260.52640.41410.069*
C60.6151 (5)0.6976 (2)0.21225 (18)0.0529 (7)
H6A0.64950.73860.16770.063*
C80.8697 (5)0.7707 (2)0.31861 (18)0.0463 (7)
C20.1763 (5)0.5407 (2)0.3778 (2)0.0578 (8)
H2A0.08300.57880.34280.069*
H2B0.22870.59050.41720.069*
C40.4663 (5)0.6208 (2)0.21594 (18)0.0509 (7)
O2−0.4388 (4)0.32706 (19)0.4938 (2)0.0888 (10)
H2D−0.43290.26620.51460.168*
H2C−0.56550.33750.48570.092*
C90.8839 (5)0.7964 (3)0.4002 (2)0.0596 (8)
H9A0.78630.77080.43600.072*
C121.1724 (6)0.8742 (3)0.2958 (3)0.0849 (12)
H12A1.27060.90030.26050.102*
C131.0158 (5)0.8108 (2)0.2666 (2)0.0612 (9)
H13A1.00900.79520.21190.073*
C101.0405 (6)0.8592 (3)0.4285 (2)0.0767 (11)
H10A1.04890.87480.48320.092*
C50.3188 (6)0.5832 (3)0.1551 (2)0.0749 (11)
H5A0.23620.52780.17780.112*
H5B0.39130.55630.10920.112*
H5C0.23280.64100.13870.112*
C111.1840 (7)0.8988 (4)0.3764 (3)0.0923 (14)
H11A1.28840.94210.39550.111*
U11U22U33U12U13U23
O10.0465 (11)0.0555 (11)0.0775 (15)0.0054 (11)0.0067 (12)0.0248 (11)
N30.0438 (12)0.0434 (12)0.0493 (13)−0.0047 (11)0.0011 (11)0.0076 (10)
N20.0465 (13)0.0423 (11)0.0479 (13)−0.0057 (11)0.0041 (12)0.0079 (10)
C70.0445 (14)0.0357 (12)0.0495 (15)−0.0022 (12)0.0054 (14)0.0087 (12)
C10.0418 (15)0.0457 (14)0.0480 (16)0.0001 (13)0.0033 (13)0.0050 (13)
C30.0473 (15)0.0414 (13)0.0628 (18)−0.0064 (14)0.0083 (15)0.0044 (13)
N10.0415 (13)0.0558 (14)0.0742 (18)0.0034 (12)0.0085 (14)0.0194 (13)
C60.0634 (18)0.0479 (14)0.0475 (16)−0.0078 (15)0.0016 (16)0.0092 (13)
C80.0443 (14)0.0376 (12)0.0569 (17)−0.0012 (12)0.0000 (15)0.0088 (12)
C20.0488 (17)0.0455 (14)0.079 (2)0.0016 (15)0.0151 (17)0.0110 (15)
C40.0569 (17)0.0487 (14)0.0470 (15)−0.0042 (15)0.0000 (15)0.0032 (13)
O20.0472 (13)0.0764 (16)0.143 (3)−0.0005 (12)0.0038 (16)0.0493 (17)
C90.0590 (19)0.0586 (17)0.0611 (19)−0.0053 (17)0.0007 (17)0.0017 (15)
C120.060 (2)0.102 (3)0.092 (3)−0.030 (2)0.008 (2)0.011 (2)
C130.0547 (18)0.0627 (18)0.066 (2)−0.0080 (17)0.0053 (17)0.0067 (16)
C100.073 (2)0.084 (2)0.074 (2)−0.014 (2)−0.014 (2)−0.007 (2)
C50.086 (3)0.078 (2)0.060 (2)−0.019 (2)−0.014 (2)0.0029 (18)
C110.069 (3)0.109 (3)0.098 (3)−0.033 (3)−0.011 (2)−0.003 (3)
O1—C11.240 (3)C2—H2A0.9700
N3—C71.344 (3)C2—H2B0.9700
N3—N21.365 (3)C4—C51.476 (4)
N2—C41.360 (4)O2—H2D0.8424
N2—C31.451 (3)O2—H2C0.8505
C7—C61.394 (4)C9—C101.378 (5)
C7—C81.473 (4)C9—H9A0.9300
C1—N11.319 (4)C12—C111.376 (6)
C1—C21.509 (4)C12—C131.388 (5)
C3—C21.505 (4)C12—H12A0.9300
C3—H3A0.9700C13—H13A0.9300
C3—H3B0.9700C10—C111.371 (6)
N1—H1A0.8600C10—H10A0.9300
N1—H1B0.8600C5—H5A0.9600
C6—C41.375 (4)C5—H5B0.9600
C6—H6A0.9300C5—H5C0.9600
C8—C131.385 (4)C11—H11A0.9300
C8—C91.397 (4)
C7—N3—N2104.6 (2)C3—C2—H2B109.1
C4—N2—N3112.3 (2)C1—C2—H2B109.1
C4—N2—C3128.9 (3)H2A—C2—H2B107.9
N3—N2—C3118.8 (2)N2—C4—C6105.8 (3)
N3—C7—C6110.7 (2)N2—C4—C5122.9 (3)
N3—C7—C8119.4 (2)C6—C4—C5131.3 (3)
C6—C7—C8129.9 (2)H2D—O2—H2C104.5
O1—C1—N1122.7 (3)C10—C9—C8120.9 (3)
O1—C1—C2120.8 (3)C10—C9—H9A119.6
N1—C1—C2116.5 (3)C8—C9—H9A119.6
N2—C3—C2112.5 (2)C11—C12—C13120.7 (4)
N2—C3—H3A109.1C11—C12—H12A119.6
C2—C3—H3A109.1C13—C12—H12A119.6
N2—C3—H3B109.1C8—C13—C12120.1 (3)
C2—C3—H3B109.1C8—C13—H13A119.9
H3A—C3—H3B107.8C12—C13—H13A119.9
C1—N1—H1A120.0C11—C10—C9120.3 (4)
C1—N1—H1B120.0C11—C10—H10A119.9
H1A—N1—H1B120.0C9—C10—H10A119.9
C4—C6—C7106.6 (3)C4—C5—H5A109.5
C4—C6—H6A126.7C4—C5—H5B109.5
C7—C6—H6A126.7H5A—C5—H5B109.5
C13—C8—C9118.4 (3)C4—C5—H5C109.5
C13—C8—C7120.6 (3)H5A—C5—H5C109.5
C9—C8—C7121.0 (3)H5B—C5—H5C109.5
C3—C2—C1112.4 (2)C10—C11—C12119.6 (4)
C3—C2—H2A109.1C10—C11—H11A120.2
C1—C2—H2A109.1C12—C11—H11A120.2
D—H···AD—HH···AD···AD—H···A
N1—H1A···O20.862.032.867 (3)165.
N1—H1B···N3i0.862.223.036 (3)159.
O2—H2D···O1ii0.841.962.783 (3)166.2
O2—H2C···O1i0.852.032.872 (3)168.5
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O20.862.032.867 (3)165
N1—H1B⋯N3i0.862.223.036 (3)159
O2—H2D⋯O1ii0.841.962.783 (3)166.2
O2—H2C⋯O1i0.852.032.872 (3)168.5

Symmetry codes: (i) ; (ii) .

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