Literature DB >> 21522679

{2-[(Benzo-yloxy)meth-yl]-1-oxo-3H-pyrrolizin-2-yl}methyl benzoate.

Yousaf Ali, Sammer Yousuf, Nighat Afza, Yu Peng, Mahboob Ali Kalhoro.   

Abstract

The title compound, C(23)H(19)NO(5), was prepared by esterification of 2,2-bis-(hy-droxy-meth-yl)-2,3-dihydro-1H-pyrrolizin-1-one with benzoyl chloride in pyridine·The pyrrolizine ring system is approximately planar with a maximum deviation of 0.008 (2) Å from the least-squares plane; the two phenyl rings are oriented at dihedral angles of 64.26 (11) and 70.75 (10)° with respect to the pyrrolizine ring system. Weak inter-molecular C-H⋯O hydrogen bonding occurs in the crystal structure.

Entities:  

Year:  2010        PMID: 21522679      PMCID: PMC3050358          DOI: 10.1107/S1600536810051974

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to 2,3-dihydro­pyrrolizine derivatives and for the biological activity of related compounds, see: Skvortsov & Astakhova (1992 ▶); Albrecht et al. (2008 ▶); Morúaa et al. (2009 ▶). For side effects of non-steroidal anti-inflammatory drugs, see: Mishra et al. (2008 ▶). For the synthesis, see: Clemo & Ramage (1931 ▶). For the natural source of the compound, see: Meinwald & Meinwald (1965 ▶). For related structures, see: Ali et al. (2010a ▶,b ▶,c ▶).

Experimental

Crystal data

C23H19NO5 M = 389.39 Triclinic, a = 8.0438 (8) Å b = 11.9359 (13) Å c = 12.0614 (13) Å α = 64.417 (2)° β = 72.670 (2)° γ = 77.390 (2)° V = 991.65 (18) Å3 Z = 2 Mo Kα radiation μ = 0.09 mm−1 T = 298 K 0.42 × 0.20 × 0.14 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer 13906 measured reflections 4932 independent reflections 3206 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.161 S = 1.01 4932 reflections 262 parameters H-atom parameters constrained Δρmax = 0.46 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶) and PLATON (Spek, 2009) ▶. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810051974/xu5119sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810051974/xu5119Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H19NO5Z = 2
Mr = 389.39F(000) = 408
Triclinic, P1Dx = 1.304 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.0438 (8) ÅCell parameters from 4932 reflections
b = 11.9359 (13) Åθ = 1.9–28.3°
c = 12.0614 (13) ŵ = 0.09 mm1
α = 64.417 (2)°T = 298 K
β = 72.670 (2)°Block, colourless
γ = 77.390 (2)°0.42 × 0.20 × 0.14 mm
V = 991.65 (18) Å3
Bruker SMART APEX CCD area-detector diffractometer3206 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.026
graphiteθmax = 28.3°, θmin = 1.9°
Detector resolution: 83.66 pixels mm-1h = −10→10
ω scansk = −15→15
13906 measured reflectionsl = −16→16
4932 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.161H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0698P)2 + 0.1946P] where P = (Fo2 + 2Fc2)/3
4932 reflections(Δ/σ)max < 0.001
262 parametersΔρmax = 0.46 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.3231 (2)0.62080 (14)0.45737 (13)0.0694 (4)
O20.55937 (16)0.70317 (12)0.43879 (11)0.0533 (3)
O30.4749 (2)0.66084 (19)0.82292 (15)0.0944 (6)
O40.7843 (2)0.85334 (13)0.61521 (14)0.0689 (4)
O50.6833 (2)1.05268 (15)0.57098 (18)0.0907 (6)
N10.8947 (2)0.56213 (15)0.69252 (13)0.0537 (4)
C10.6217 (3)0.8044 (2)0.17996 (19)0.0714 (6)
H1A0.68350.82840.21870.086*
C20.6589 (4)0.8481 (3)0.0492 (2)0.0926 (9)
H2A0.74520.90190.00030.111*
C30.5692 (4)0.8123 (3)−0.0073 (2)0.0869 (8)
H3A0.59490.8415−0.09500.104*
C40.4434 (4)0.7349 (2)0.0627 (2)0.0818 (7)
H4A0.38320.71050.02310.098*
C50.4036 (3)0.6918 (2)0.19253 (19)0.0668 (6)
H5A0.31540.63950.24040.080*
C60.4945 (2)0.72617 (16)0.25171 (16)0.0479 (4)
C70.4475 (2)0.67765 (16)0.39199 (16)0.0486 (4)
C80.5139 (3)0.66392 (18)0.57460 (16)0.0559 (5)
H8A0.50440.57480.61540.067*
H8B0.40210.70700.60070.067*
C90.6569 (3)0.69529 (17)0.61193 (16)0.0531 (5)
C100.6152 (3)0.63955 (19)0.75869 (17)0.0575 (5)
C110.7683 (2)0.56484 (17)0.79665 (16)0.0513 (4)
C120.8376 (3)0.4943 (2)0.90126 (19)0.0686 (6)
H12A0.78160.48000.98500.082*
C131.0058 (3)0.4495 (3)0.8577 (2)0.0821 (7)
H13A1.08380.39890.90750.098*
C141.0393 (3)0.4921 (2)0.7279 (2)0.0730 (6)
H14A1.14290.47530.67470.088*
C150.8401 (3)0.63095 (18)0.57321 (16)0.0562 (5)
H15A0.83400.57480.53600.067*
H15B0.92010.69200.51340.067*
C160.6544 (3)0.83585 (18)0.5645 (2)0.0647 (5)
H16A0.68430.87350.47290.078*
H16B0.53960.87290.59470.078*
C170.7803 (3)0.96426 (18)0.61761 (18)0.0553 (5)
C180.9055 (2)0.96183 (17)0.68757 (17)0.0520 (4)
C191.0125 (3)0.8561 (2)0.7402 (2)0.0678 (6)
H19A1.01220.78390.72880.081*
C201.1203 (3)0.8573 (2)0.8099 (3)0.0820 (7)
H20A1.19290.78580.84490.098*
C211.1210 (3)0.9627 (3)0.8276 (3)0.0848 (7)
H21A1.19310.96270.87530.102*
C221.0158 (3)1.0683 (2)0.7753 (3)0.0856 (8)
H22A1.01611.14000.78750.103*
C230.9094 (3)1.0683 (2)0.7047 (2)0.0704 (6)
H23A0.83951.14080.66810.084*
U11U22U33U12U13U23
O10.0775 (10)0.0854 (10)0.0497 (8)−0.0319 (8)−0.0126 (7)−0.0209 (7)
O20.0670 (8)0.0615 (8)0.0392 (6)−0.0112 (6)−0.0191 (6)−0.0204 (6)
O30.0874 (12)0.1345 (16)0.0621 (10)0.0270 (11)−0.0207 (9)−0.0554 (10)
O40.0845 (10)0.0583 (8)0.0831 (10)0.0067 (7)−0.0485 (8)−0.0329 (7)
O50.1067 (13)0.0594 (9)0.1268 (15)0.0124 (9)−0.0780 (12)−0.0321 (9)
N10.0598 (9)0.0614 (10)0.0416 (8)−0.0062 (7)−0.0165 (7)−0.0187 (7)
C10.0742 (14)0.0969 (16)0.0524 (11)−0.0331 (12)−0.0164 (10)−0.0254 (11)
C20.0941 (18)0.127 (2)0.0526 (13)−0.0546 (17)−0.0050 (12)−0.0194 (14)
C30.1055 (19)0.118 (2)0.0402 (11)−0.0312 (16)−0.0152 (12)−0.0256 (12)
C40.1089 (19)0.1024 (19)0.0540 (12)−0.0312 (15)−0.0293 (13)−0.0326 (12)
C50.0874 (15)0.0748 (14)0.0505 (11)−0.0283 (11)−0.0223 (10)−0.0225 (10)
C60.0548 (10)0.0505 (10)0.0432 (9)−0.0038 (8)−0.0173 (8)−0.0197 (8)
C70.0577 (11)0.0498 (10)0.0446 (9)−0.0045 (8)−0.0180 (8)−0.0206 (8)
C80.0724 (12)0.0609 (11)0.0391 (9)−0.0075 (9)−0.0183 (9)−0.0202 (8)
C90.0686 (12)0.0568 (11)0.0415 (9)0.0010 (9)−0.0231 (8)−0.0232 (8)
C100.0684 (12)0.0700 (13)0.0429 (10)0.0037 (10)−0.0178 (9)−0.0321 (9)
C110.0632 (11)0.0585 (11)0.0363 (9)−0.0074 (9)−0.0155 (8)−0.0195 (8)
C120.0811 (15)0.0813 (15)0.0422 (10)−0.0107 (12)−0.0227 (10)−0.0166 (10)
C130.0791 (16)0.0966 (18)0.0647 (14)0.0073 (13)−0.0366 (12)−0.0211 (13)
C140.0586 (12)0.0927 (17)0.0661 (13)0.0062 (11)−0.0233 (10)−0.0306 (12)
C150.0709 (12)0.0633 (12)0.0392 (9)−0.0046 (9)−0.0170 (9)−0.0229 (8)
C160.0837 (14)0.0601 (12)0.0653 (12)0.0008 (10)−0.0422 (11)−0.0260 (10)
C170.0616 (11)0.0504 (11)0.0547 (11)−0.0034 (9)−0.0213 (9)−0.0176 (9)
C180.0478 (10)0.0543 (11)0.0521 (10)−0.0074 (8)−0.0132 (8)−0.0171 (8)
C190.0672 (13)0.0619 (13)0.0826 (15)0.0046 (10)−0.0339 (11)−0.0304 (11)
C200.0737 (15)0.0752 (15)0.1005 (19)0.0050 (12)−0.0476 (14)−0.0259 (14)
C210.0734 (15)0.0923 (18)0.1029 (19)−0.0155 (13)−0.0445 (14)−0.0326 (15)
C220.0815 (16)0.0752 (16)0.123 (2)−0.0121 (12)−0.0450 (16)−0.0446 (15)
C230.0637 (13)0.0565 (12)0.0986 (17)−0.0037 (9)−0.0348 (12)−0.0283 (12)
O1—C71.203 (2)C9—C151.544 (3)
O2—C71.339 (2)C9—C101.554 (2)
O2—C81.446 (2)C10—C111.423 (3)
O3—C101.209 (2)C11—C121.382 (2)
O4—C171.330 (2)C12—C131.377 (3)
O4—C161.448 (2)C12—H12A0.9300
O5—C171.195 (2)C13—C141.380 (3)
N1—C141.340 (2)C13—H13A0.9300
N1—C111.368 (2)C14—H14A0.9300
N1—C151.462 (2)C15—H15A0.9700
C1—C61.364 (3)C15—H15B0.9700
C1—C21.387 (3)C16—H16A0.9700
C1—H1A0.9300C16—H16B0.9700
C2—C31.359 (3)C17—C181.483 (3)
C2—H2A0.9300C18—C191.377 (3)
C3—C41.348 (3)C18—C231.381 (3)
C3—H3A0.9300C19—C201.381 (3)
C4—C51.378 (3)C19—H19A0.9300
C4—H4A0.9300C20—C211.366 (4)
C5—C61.380 (2)C20—H20A0.9300
C5—H5A0.9300C21—C221.367 (3)
C6—C71.486 (2)C21—H21A0.9300
C8—C91.520 (3)C22—C231.375 (3)
C8—H8A0.9700C22—H22A0.9300
C8—H8B0.9700C23—H23A0.9300
C9—C161.518 (3)
C7—O2—C8114.90 (14)C12—C11—C10142.85 (19)
C17—O4—C16118.43 (15)C13—C12—C11106.76 (19)
C14—N1—C11109.83 (16)C13—C12—H12A126.6
C14—N1—C15135.85 (17)C11—C12—H12A126.6
C11—N1—C15114.29 (15)C12—C13—C14108.64 (19)
C6—C1—C2120.1 (2)C12—C13—H13A125.7
C6—C1—H1A120.0C14—C13—H13A125.7
C2—C1—H1A120.0N1—C14—C13107.3 (2)
C3—C2—C1119.9 (2)N1—C14—H14A126.4
C3—C2—H2A120.0C13—C14—H14A126.4
C1—C2—H2A120.0N1—C15—C9103.49 (14)
C4—C3—C2120.5 (2)N1—C15—H15A111.1
C4—C3—H3A119.7C9—C15—H15A111.1
C2—C3—H3A119.7N1—C15—H15B111.1
C3—C4—C5120.2 (2)C9—C15—H15B111.1
C3—C4—H4A119.9H15A—C15—H15B109.0
C5—C4—H4A119.9O4—C16—C9105.05 (14)
C4—C5—C6120.1 (2)O4—C16—H16A110.7
C4—C5—H5A119.9C9—C16—H16A110.7
C6—C5—H5A119.9O4—C16—H16B110.7
C1—C6—C5119.15 (17)C9—C16—H16B110.7
C1—C6—C7122.40 (16)H16A—C16—H16B108.8
C5—C6—C7118.44 (17)O5—C17—O4122.90 (18)
O1—C7—O2123.14 (16)O5—C17—C18125.42 (18)
O1—C7—C6124.05 (16)O4—C17—C18111.66 (16)
O2—C7—C6112.81 (15)C19—C18—C23118.99 (19)
O2—C8—C9108.01 (15)C19—C18—C17122.41 (18)
O2—C8—H8A110.1C23—C18—C17118.54 (17)
C9—C8—H8A110.1C18—C19—C20120.0 (2)
O2—C8—H8B110.1C18—C19—H19A120.0
C9—C8—H8B110.1C20—C19—H19A120.0
H8A—C8—H8B108.4C21—C20—C19120.4 (2)
C16—C9—C8110.34 (15)C21—C20—H20A119.8
C16—C9—C15112.71 (17)C19—C20—H20A119.8
C8—C9—C15113.55 (15)C20—C21—C22120.0 (2)
C16—C9—C10108.49 (15)C20—C21—H21A120.0
C8—C9—C10106.88 (16)C22—C21—H21A120.0
C15—C9—C10104.41 (14)C21—C22—C23120.0 (2)
O3—C10—C11129.35 (18)C21—C22—H22A120.0
O3—C10—C9123.08 (18)C23—C22—H22A120.0
C11—C10—C9107.57 (16)C22—C23—C18120.6 (2)
N1—C11—C12107.50 (17)C22—C23—H23A119.7
N1—C11—C10109.64 (15)C18—C23—H23A119.7
C6—C1—C2—C3−0.4 (4)C9—C10—C11—C12175.6 (3)
C1—C2—C3—C40.3 (5)N1—C11—C12—C13−0.4 (2)
C2—C3—C4—C50.4 (4)C10—C11—C12—C13−179.3 (3)
C3—C4—C5—C6−1.0 (4)C11—C12—C13—C140.1 (3)
C2—C1—C6—C5−0.2 (4)C11—N1—C14—C13−0.5 (3)
C2—C1—C6—C7−179.2 (2)C15—N1—C14—C13−178.2 (2)
C4—C5—C6—C10.9 (3)C12—C13—C14—N10.2 (3)
C4—C5—C6—C7180.0 (2)C14—N1—C15—C9−176.2 (2)
C8—O2—C7—O1−3.6 (3)C11—N1—C15—C96.1 (2)
C8—O2—C7—C6176.72 (14)C16—C9—C15—N1110.08 (16)
C1—C6—C7—O1170.9 (2)C8—C9—C15—N1−123.51 (16)
C5—C6—C7—O1−8.2 (3)C10—C9—C15—N1−7.47 (19)
C1—C6—C7—O2−9.5 (3)C17—O4—C16—C9−162.70 (17)
C5—C6—C7—O2171.47 (17)C8—C9—C16—O4175.02 (15)
C7—O2—C8—C9177.88 (14)C15—C9—C16—O4−56.9 (2)
O2—C8—C9—C1668.2 (2)C10—C9—C16—O458.2 (2)
O2—C8—C9—C15−59.5 (2)C16—O4—C17—O5−6.0 (3)
O2—C8—C9—C10−174.06 (14)C16—O4—C17—C18172.28 (17)
C16—C9—C10—O365.9 (3)O5—C17—C18—C19179.3 (2)
C8—C9—C10—O3−53.1 (3)O4—C17—C18—C191.1 (3)
C15—C9—C10—O3−173.7 (2)O5—C17—C18—C232.0 (3)
C16—C9—C10—C11−113.60 (18)O4—C17—C18—C23−176.29 (19)
C8—C9—C10—C11127.42 (17)C23—C18—C19—C200.6 (3)
C15—C9—C10—C116.8 (2)C17—C18—C19—C20−176.7 (2)
C14—N1—C11—C120.5 (2)C18—C19—C20—C210.3 (4)
C15—N1—C11—C12178.82 (17)C19—C20—C21—C22−0.6 (4)
C14—N1—C11—C10179.85 (17)C20—C21—C22—C23−0.1 (4)
C15—N1—C11—C10−1.9 (2)C21—C22—C23—C181.1 (4)
O3—C10—C11—N1177.2 (2)C19—C18—C23—C22−1.3 (3)
C9—C10—C11—N1−3.3 (2)C17—C18—C23—C22176.1 (2)
O3—C10—C11—C12−3.9 (5)
D—H···AD—HH···AD···AD—H···A
C4—H4A···O3i0.932.593.299 (3)133
C20—H20A···O3ii0.932.443.269 (3)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4A⋯O3i0.932.593.299 (3)133
C20—H20A⋯O3ii0.932.443.269 (3)149

Symmetry codes: (i) ; (ii) .

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