Literature DB >> 21587819

(E)-2-(2-Furylmethyl-idene)-2,3-dihydro-1H-pyrrolizin-1-one.

Yousaf Ali1, Peng Yu, Erbing Hua, Guo Rui, Sun Qi.   

Abstract

The title compound, C(12)H(9)NO(2), was prepared by an Aldol reaction of furfuraldehyde with 2,3-dihydro-1H-pyrrolizin-1-one. The mol-ecule is almost planar, with an r.m.s. deviation of 0.045 Å, excluding the methyl-ene H atoms. In the crystal structure, mol-ecules are linked via weak inter-molecular C-H⋯O hydrogen bonding and aromatic π-π stacking [centroid-centroid distance = 3.6151 (9) Å].

Entities:  

Year:  2010        PMID: 21587819      PMCID: PMC3006878          DOI: 10.1107/S1600536810017939

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to synthetic dihydro­pyrrolizines and for the biological activity of related structures, see: Meinwald & Meinwald (1965 ▶); Skvortsov & Astakhova (1992 ▶). For the preparation of the starting material, see: Clemo & Ramage (1931 ▶); Braunholtz et al. (1962 ▶).

Experimental

Crystal data

C12H9NO2 M = 199.20 Monoclinic, a = 11.8170 (16) Å b = 6.1242 (6) Å c = 14.432 (2) Å β = 113.157 (3)° V = 960.3 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 113 K 0.22 × 0.18 × 0.12 mm

Data collection

Rigaku Saturn724 CCD camera diffractometer 9348 measured reflections 2271 independent reflections 1796 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.100 S = 1.07 2271 reflections 136 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.23 e Å−3 Data collection: CrystalClear (Rigaku, 2009 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810017939/xu2760sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810017939/xu2760Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9NO2F(000) = 416
Mr = 199.20Dx = 1.378 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71075 Å
Hall symbol: -P 2ybcCell parameters from 2971 reflections
a = 11.8170 (16) Åθ = 1.5–28.0°
b = 6.1242 (6) ŵ = 0.10 mm1
c = 14.432 (2) ÅT = 113 K
β = 113.157 (3)°Prism, colourless
V = 960.3 (2) Å30.22 × 0.18 × 0.12 mm
Z = 4
Rigaku Saturn724 CCD camera diffractometer1796 reflections with I > 2σ(I)
Radiation source: rotating anodeRint = 0.025
multilayerθmax = 27.9°, θmin = 1.9°
ω scansh = −14→15
9348 measured reflectionsk = −7→7
2271 independent reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.0572P)2 + 0.0917P] where P = (Fo2 + 2Fc2)/3
2271 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.23 e Å3
Experimental. Single crystals suitable for X-ray crystallography were grown by slow evaporatin from ethyl acetate solution and of by slow cooling of a hot saturated solution of Petroleum Ether. Crystals obtained from later were found more suitable for X ray analysis.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.81898 (7)0.03138 (13)0.87581 (6)0.0268 (2)
O21.15722 (7)0.60788 (13)0.91369 (6)0.0239 (2)
N10.76145 (8)0.52826 (15)0.74753 (7)0.0190 (2)
C10.82061 (10)0.21177 (18)0.83928 (8)0.0190 (2)
C20.71886 (10)0.33225 (17)0.76750 (8)0.0187 (2)
C30.59277 (10)0.32408 (19)0.71216 (8)0.0219 (3)
H30.53870.20830.71100.026*
C40.56100 (11)0.52063 (19)0.65837 (9)0.0254 (3)
H40.48060.56180.61330.030*
C50.66732 (10)0.64550 (18)0.68219 (8)0.0229 (3)
H50.67250.78690.65710.027*
C60.89436 (10)0.56200 (19)0.80194 (8)0.0209 (2)
H6A0.91190.69130.84660.025*
H6B0.93630.57840.75500.025*
C70.93162 (10)0.35275 (17)0.86190 (8)0.0182 (2)
C81.04282 (10)0.29109 (18)0.92790 (8)0.0194 (2)
H81.04680.15250.95860.023*
C91.15627 (10)0.40818 (18)0.95782 (8)0.0197 (2)
C101.27159 (10)0.35966 (18)1.02555 (8)0.0221 (3)
H101.29590.23231.06620.026*
C111.34842 (10)0.5362 (2)1.02364 (8)0.0238 (3)
H111.43420.54991.06260.029*
C121.27594 (10)0.6803 (2)0.95590 (8)0.0247 (3)
H121.30370.81480.93960.030*
U11U22U33U12U13U23
O10.0259 (4)0.0196 (4)0.0298 (4)−0.0021 (3)0.0056 (4)0.0068 (3)
O20.0229 (4)0.0244 (4)0.0219 (4)−0.0043 (3)0.0061 (3)0.0043 (3)
N10.0198 (5)0.0185 (5)0.0183 (4)0.0014 (4)0.0070 (4)0.0023 (4)
C10.0218 (6)0.0175 (5)0.0178 (5)−0.0001 (4)0.0079 (4)−0.0011 (4)
C20.0212 (6)0.0179 (5)0.0180 (5)0.0000 (4)0.0087 (4)0.0000 (4)
C30.0206 (6)0.0244 (6)0.0208 (5)0.0000 (4)0.0082 (4)−0.0007 (4)
C40.0216 (6)0.0292 (7)0.0236 (5)0.0067 (5)0.0070 (5)0.0015 (5)
C50.0256 (6)0.0204 (6)0.0218 (5)0.0066 (5)0.0084 (5)0.0044 (4)
C60.0202 (6)0.0203 (6)0.0212 (5)−0.0011 (4)0.0072 (4)0.0029 (4)
C70.0203 (6)0.0177 (5)0.0174 (5)−0.0001 (4)0.0083 (4)0.0002 (4)
C80.0219 (5)0.0187 (5)0.0182 (5)0.0002 (4)0.0085 (4)0.0006 (4)
C90.0227 (6)0.0192 (5)0.0186 (5)−0.0001 (4)0.0095 (4)0.0002 (4)
C100.0211 (6)0.0237 (6)0.0207 (5)−0.0003 (4)0.0075 (4)−0.0009 (4)
C110.0198 (6)0.0297 (6)0.0217 (5)−0.0037 (5)0.0078 (4)−0.0036 (5)
C120.0236 (6)0.0286 (6)0.0222 (5)−0.0090 (5)0.0094 (5)−0.0020 (5)
O1—C11.2274 (13)C5—H50.9500
O2—C121.3652 (14)C6—C71.5117 (14)
O2—C91.3810 (13)C6—H6A0.9900
N1—C51.3480 (14)C6—H6B0.9900
N1—C21.3754 (14)C7—C81.3388 (14)
N1—C61.4683 (14)C8—C91.4292 (15)
C1—C21.4435 (14)C8—H80.9500
C1—C71.4953 (15)C9—C101.3613 (15)
C2—C31.3873 (15)C10—C111.4191 (16)
C3—C41.4011 (15)C10—H100.9500
C3—H30.9500C11—C121.3451 (17)
C4—C51.3935 (17)C11—H110.9500
C4—H40.9500C12—H120.9500
C12—O2—C9105.97 (9)N1—C6—H6B111.5
C5—N1—C2110.01 (9)C7—C6—H6B111.5
C5—N1—C6135.57 (10)H6A—C6—H6B109.3
C2—N1—C6114.42 (9)C8—C7—C1121.59 (10)
O1—C1—C2128.24 (10)C8—C7—C6129.04 (10)
O1—C1—C7125.91 (10)C1—C7—C6109.36 (9)
C2—C1—C7105.85 (9)C7—C8—C9127.96 (11)
N1—C2—C3108.03 (9)C7—C8—H8116.0
N1—C2—C1109.05 (9)C9—C8—H8116.0
C3—C2—C1142.91 (10)C10—C9—O2109.70 (10)
C2—C3—C4106.33 (10)C10—C9—C8131.50 (11)
C2—C3—H3126.8O2—C9—C8118.80 (9)
C4—C3—H3126.8C9—C10—C11106.69 (10)
C5—C4—C3108.40 (10)C9—C10—H10126.7
C5—C4—H4125.8C11—C10—H10126.7
C3—C4—H4125.8C12—C11—C10106.53 (10)
N1—C5—C4107.23 (10)C12—C11—H11126.7
N1—C5—H5126.4C10—C11—H11126.7
C4—C5—H5126.4C11—C12—O2111.11 (10)
N1—C6—C7101.32 (8)C11—C12—H12124.4
N1—C6—H6A111.5O2—C12—H12124.4
C7—C6—H6A111.5
C5—N1—C2—C30.38 (12)C2—C1—C7—C8178.79 (10)
C6—N1—C2—C3179.39 (9)O1—C1—C7—C6−179.66 (11)
C5—N1—C2—C1−178.70 (9)C2—C1—C7—C60.05 (12)
C6—N1—C2—C10.31 (12)N1—C6—C7—C8−178.51 (11)
O1—C1—C2—N1179.49 (11)N1—C6—C7—C10.11 (11)
C7—C1—C2—N1−0.21 (12)C1—C7—C8—C9−179.33 (10)
O1—C1—C2—C30.9 (2)C6—C7—C8—C9−0.85 (19)
C7—C1—C2—C3−178.76 (14)C12—O2—C9—C100.11 (12)
N1—C2—C3—C40.06 (12)C12—O2—C9—C8−179.84 (10)
C1—C2—C3—C4178.62 (14)C7—C8—C9—C10178.22 (11)
C2—C3—C4—C5−0.46 (12)C7—C8—C9—O2−1.85 (17)
C2—N1—C5—C4−0.67 (13)O2—C9—C10—C11−0.21 (12)
C6—N1—C5—C4−179.37 (11)C8—C9—C10—C11179.73 (11)
C3—C4—C5—N10.69 (13)C9—C10—C11—C120.23 (13)
C5—N1—C6—C7178.40 (12)C10—C11—C12—O2−0.17 (13)
C2—N1—C6—C7−0.26 (11)C9—O2—C12—C110.04 (12)
O1—C1—C7—C8−0.91 (17)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O1i0.992.473.3076 (15)142
C8—H8···O1ii0.952.553.3096 (14)137
C10—H10···O1ii0.952.463.1789 (15)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6A⋯O1i0.992.473.3076 (15)142
C8—H8⋯O1ii0.952.553.3096 (14)137
C10—H10⋯O1ii0.952.463.1789 (15)133

Symmetry codes: (i) ; (ii) .

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