| Literature DB >> 21522570 |
Wojciech Starosta1, Janusz Leciejewicz.
Abstract
In the title coordination polymer, [Li(2)(C(6)H(2)N(2)O(2))(H(2)O)(2)](n) the pyrazine-2,5-dicarboxyl-ate dianionic ligand bridges two symmetry-independent Li(+) ions using both its N,O-chelating sites. The carboxyl-ate O atom of one of them also bridges to another Li(+) ion, while the second O atom of this group is bonded to another Li(+) ion. Two symmetry-independent water O atoms participate also in the bridging system, which gives rise to a polymeric three-dimensional framework. Both Li(+) ions show distorted trigonal-bipyramidal LiNO(4) coordination geometries, with the N atom in an axial site in both cases. The packing is consolidated by O-H⋯O hydrogen bonds, which occur between water mol-ecules as donors and carboxyl-ate O atoms as acceptors.Entities:
Year: 2010 PMID: 21522570 PMCID: PMC3050281 DOI: 10.1107/S1600536810050762
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Li2(C6H2N2O2)(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 25 reflections |
| θ = 6–15° | |
| µ = 0.16 mm−1 | |
| β = 99.71 (3)° | Plates, colourless |
| 0.33 × 0.17 × 0.15 mm | |
| Kuma KM-4 four-circle diffractometer | 1694 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 30.1°, θmin = 2.7° |
| profile data from ω/2θ scans | |
| Absorption correction: analytical ( | |
| 2520 measured reflections | 3 standard reflections every 200 reflections |
| 2348 independent reflections | intensity decay: 0.6% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2348 reflections | (Δ/σ)max = 0.001 |
| 161 parameters | Δρmax = 0.73 e Å−3 |
| 0 restraints | Δρmin = −0.62 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O5 | 0.92850 (16) | 0.21032 (15) | 1.23861 (7) | 0.0235 (3) | |
| N2 | 0.85719 (16) | 0.06063 (16) | 0.86051 (8) | 0.0178 (3) | |
| O3 | 0.99726 (17) | 0.31016 (14) | 0.76139 (7) | 0.0248 (3) | |
| O6 | 0.54300 (17) | 0.41912 (16) | 1.12325 (8) | 0.0248 (3) | |
| N1 | 0.76024 (18) | 0.16459 (17) | 1.02138 (8) | 0.0194 (3) | |
| O1 | 0.65141 (17) | −0.08194 (16) | 1.12869 (7) | 0.0258 (3) | |
| C7 | 0.69244 (18) | −0.14435 (18) | 1.05880 (8) | 0.0171 (3) | |
| C3 | 0.85787 (18) | 0.23438 (19) | 0.88494 (9) | 0.0167 (3) | |
| C8 | 0.9150 (2) | 0.37044 (19) | 0.82054 (9) | 0.0194 (3) | |
| O2 | 0.68766 (17) | −0.30725 (14) | 1.03608 (7) | 0.0252 (3) | |
| O4 | 0.8671 (2) | 0.53125 (16) | 0.83062 (9) | 0.0342 (3) | |
| C5 | 0.80318 (19) | −0.06117 (19) | 0.91591 (9) | 0.0177 (3) | |
| H5 | 0.7990 | −0.1835 | 0.9006 | 0.021* | |
| C6 | 0.75335 (17) | −0.00880 (18) | 0.99566 (8) | 0.0155 (3) | |
| C2 | 0.8103 (2) | 0.28635 (19) | 0.96561 (9) | 0.0202 (3) | |
| H2 | 0.8136 | 0.4087 | 0.9808 | 0.024* | |
| Li2 | 0.9486 (5) | 0.0403 (4) | 0.7358 (2) | 0.0360 (7) | |
| Li1 | 0.6732 (4) | 0.1742 (4) | 1.1630 (2) | 0.0298 (6) | |
| H51 | 0.908 (4) | 0.263 (4) | 1.284 (2) | 0.063 (9)* | |
| H62 | 0.609 (4) | 0.503 (4) | 1.1012 (17) | 0.049 (7)* | |
| H52 | 0.994 (4) | 0.294 (4) | 1.2126 (18) | 0.051 (7)* | |
| H61 | 0.472 (5) | 0.375 (5) | 1.079 (3) | 0.093 (12)* |
| O5 | 0.0301 (6) | 0.0199 (5) | 0.0225 (5) | −0.0017 (4) | 0.0104 (4) | −0.0037 (4) |
| N2 | 0.0191 (5) | 0.0162 (5) | 0.0190 (5) | 0.0008 (4) | 0.0059 (4) | 0.0006 (4) |
| O3 | 0.0301 (6) | 0.0227 (5) | 0.0246 (5) | 0.0010 (4) | 0.0137 (4) | 0.0013 (4) |
| O6 | 0.0298 (6) | 0.0216 (5) | 0.0246 (5) | −0.0021 (4) | 0.0096 (4) | 0.0010 (4) |
| N1 | 0.0229 (6) | 0.0172 (6) | 0.0191 (5) | 0.0018 (4) | 0.0064 (4) | −0.0001 (4) |
| O1 | 0.0365 (6) | 0.0212 (5) | 0.0230 (5) | 0.0003 (4) | 0.0148 (5) | 0.0015 (4) |
| C7 | 0.0148 (6) | 0.0174 (6) | 0.0191 (6) | −0.0001 (5) | 0.0033 (5) | 0.0010 (5) |
| C3 | 0.0156 (6) | 0.0166 (6) | 0.0182 (6) | 0.0019 (4) | 0.0037 (5) | 0.0015 (4) |
| C8 | 0.0213 (7) | 0.0169 (6) | 0.0211 (6) | 0.0007 (5) | 0.0063 (5) | 0.0025 (5) |
| O2 | 0.0335 (6) | 0.0178 (5) | 0.0259 (5) | −0.0039 (4) | 0.0094 (4) | −0.0006 (4) |
| O4 | 0.0516 (8) | 0.0171 (5) | 0.0400 (7) | 0.0061 (5) | 0.0249 (6) | 0.0042 (5) |
| C5 | 0.0197 (6) | 0.0152 (6) | 0.0192 (6) | −0.0008 (5) | 0.0057 (5) | −0.0004 (4) |
| C6 | 0.0145 (6) | 0.0145 (6) | 0.0178 (6) | 0.0008 (4) | 0.0035 (5) | 0.0014 (4) |
| C2 | 0.0264 (7) | 0.0145 (6) | 0.0211 (6) | 0.0025 (5) | 0.0082 (5) | 0.0003 (5) |
| Li2 | 0.053 (2) | 0.0239 (14) | 0.0359 (16) | −0.0019 (13) | 0.0218 (15) | −0.0027 (11) |
| Li1 | 0.0305 (14) | 0.0250 (13) | 0.0332 (14) | 0.0005 (11) | 0.0033 (11) | −0.0046 (11) |
| O5—Li2i | 2.056 (4) | O6—H62 | 0.88 (3) |
| O3—Li1ii | 2.131 (3) | O6—H61 | 0.84 (4) |
| O6—Li2iii | 1.981 (3) | N1—C2 | 1.3303 (18) |
| O4—Li2iv | 2.332 (4) | N1—C6 | 1.3348 (18) |
| Li1—O1 | 1.958 (3) | O1—C7 | 1.2463 (17) |
| Li1—O5 | 2.020 (3) | C7—O2 | 1.2481 (17) |
| Li1—O6 | 2.077 (3) | C7—C6 | 1.5064 (18) |
| Li1—O3iii | 2.131 (3) | C3—C2 | 1.3913 (18) |
| Li1—N1 | 2.360 (3) | C3—C8 | 1.5117 (19) |
| Li2—O6ii | 1.981 (3) | C8—O4 | 1.2506 (19) |
| Li2—O3 | 2.045 (3) | C5—C6 | 1.3857 (18) |
| Li2—O5i | 2.056 (3) | C5—H5 | 0.9300 |
| Li2—O4v | 2.332 (4) | C2—H2 | 0.9300 |
| Li2—N2 | 2.129 (3) | Li2—Li1ii | 2.983 (4) |
| O5—H51 | 0.83 (3) | Li2—Li1i | 3.303 (5) |
| O5—H52 | 0.91 (3) | Li1—Li2iii | 2.983 (4) |
| N2—C3 | 1.3330 (18) | Li1—Li2i | 3.303 (5) |
| N2—C5 | 1.3376 (17) | Li1—H61 | 2.30 (4) |
| O3—C8 | 1.2458 (17) | ||
| Li1—O5—Li2i | 108.24 (14) | O3—Li2—N2 | 80.13 (12) |
| Li1—O5—H51 | 105 (2) | O5i—Li2—N2 | 94.63 (14) |
| Li2i—O5—H51 | 113 (2) | O6ii—Li2—O4v | 94.45 (15) |
| Li1—O5—H52 | 109.1 (17) | O3—Li2—O4v | 103.58 (15) |
| Li2i—O5—H52 | 117.0 (18) | O5i—Li2—O4v | 114.53 (15) |
| H51—O5—H52 | 103 (3) | N2—Li2—O4v | 88.10 (13) |
| C3—N2—C5 | 116.94 (12) | O6ii—Li2—Li1ii | 43.94 (9) |
| C3—N2—Li2 | 109.43 (13) | O3—Li2—Li1ii | 45.59 (9) |
| C5—N2—Li2 | 133.63 (13) | O5i—Li2—Li1ii | 117.39 (15) |
| C8—O3—Li2 | 113.48 (13) | N2—Li2—Li1ii | 123.78 (15) |
| C8—O3—Li1ii | 155.36 (13) | O4v—Li2—Li1ii | 114.10 (14) |
| Li2—O3—Li1ii | 91.16 (13) | O6ii—Li2—Li1i | 95.92 (14) |
| Li2iii—O6—Li1 | 94.61 (13) | O3—Li2—Li1i | 105.87 (15) |
| Li2iii—O6—H62 | 121.1 (18) | O5i—Li2—Li1i | 35.51 (9) |
| Li1—O6—H62 | 118.3 (19) | N2—Li2—Li1i | 88.18 (13) |
| Li2iii—O6—H61 | 120 (3) | O4v—Li2—Li1i | 149.19 (14) |
| Li1—O6—H61 | 95 (3) | Li1ii—Li2—Li1i | 93.17 (11) |
| H62—O6—H61 | 105 (3) | O1—Li1—O5 | 107.76 (15) |
| C2—N1—C6 | 117.11 (12) | O1—Li1—O6 | 138.27 (17) |
| C2—N1—Li1 | 135.56 (12) | O5—Li1—O6 | 112.16 (15) |
| C6—N1—Li1 | 107.34 (11) | O1—Li1—O3iii | 102.21 (15) |
| C7—O1—Li1 | 124.49 (14) | O5—Li1—O3iii | 100.41 (14) |
| O1—C7—O2 | 126.51 (13) | O6—Li1—O3iii | 82.36 (12) |
| O1—C7—C6 | 116.42 (12) | O1—Li1—N1 | 75.27 (11) |
| O2—C7—C6 | 117.07 (12) | O5—Li1—N1 | 100.00 (14) |
| N2—C3—C2 | 121.60 (12) | O6—Li1—N1 | 86.19 (12) |
| N2—C3—C8 | 116.19 (11) | O3iii—Li1—N1 | 159.18 (16) |
| C2—C3—C8 | 122.21 (12) | O1—Li1—Li2iii | 139.07 (16) |
| O3—C8—O4 | 127.07 (13) | O5—Li1—Li2iii | 101.09 (13) |
| O3—C8—C3 | 117.04 (13) | O6—Li1—Li2iii | 41.45 (9) |
| O4—C8—C3 | 115.82 (12) | O3iii—Li1—Li2iii | 43.25 (9) |
| C8—O4—Li2iv | 104.05 (13) | N1—Li1—Li2iii | 127.64 (14) |
| N2—C5—C6 | 121.33 (13) | O1—Li1—Li2i | 71.81 (11) |
| N2—C5—H5 | 119.3 | O5—Li1—Li2i | 36.25 (8) |
| C6—C5—H5 | 119.3 | O6—Li1—Li2i | 148.18 (15) |
| N1—C6—C5 | 121.63 (12) | O3iii—Li1—Li2i | 103.68 (13) |
| N1—C6—C7 | 116.40 (11) | N1—Li1—Li2i | 95.21 (12) |
| C5—C6—C7 | 121.96 (12) | Li2iii—Li1—Li2i | 128.23 (11) |
| N1—C2—C3 | 121.33 (13) | O1—Li1—H61 | 117.0 (10) |
| N1—C2—H2 | 119.3 | O5—Li1—H61 | 131.5 (10) |
| C3—C2—H2 | 119.3 | O6—Li1—H61 | 21.3 (10) |
| O6ii—Li2—O3 | 86.97 (13) | O3iii—Li1—H61 | 88.0 (9) |
| O6ii—Li2—O5i | 95.80 (14) | N1—Li1—H61 | 75.4 (9) |
| O3—Li2—O5i | 141.4 (2) | Li2iii—Li1—H61 | 54.9 (10) |
| O6ii—Li2—N2 | 167.10 (18) | Li2i—Li1—H61 | 164.0 (10) |
| H··· | ||||
| O6—H62···O2vi | 0.88 (3) | 1.86 (3) | 2.7210 (16) | 165 (3) |
| O6—H61···O2vii | 0.84 (4) | 2.00 (4) | 2.8351 (19) | 170 (4) |
| O5—H52···O4viii | 0.91 (3) | 1.82 (3) | 2.7292 (17) | 175 (3) |
| O5—H51···O1ix | 0.83 (3) | 1.87 (3) | 2.6842 (16) | 169 (3) |
Selected bond lengths (Å)
| Li1—O1 | 1.958 (3) |
| Li1—O5 | 2.020 (3) |
| Li1—O6 | 2.077 (3) |
| Li1—O3i | 2.131 (3) |
| Li1—N1 | 2.360 (3) |
| Li2—O6ii | 1.981 (3) |
| Li2—O3 | 2.045 (3) |
| Li2—O5iii | 2.056 (3) |
| Li2—O4iv | 2.332 (4) |
| Li2—N2 | 2.129 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O6—H62⋯O2v | 0.88 (3) | 1.86 (3) | 2.7210 (16) | 165 (3) |
| O6—H61⋯O2vi | 0.84 (4) | 2.00 (4) | 2.8351 (19) | 170 (4) |
| O5—H52⋯O4vii | 0.91 (3) | 1.82 (3) | 2.7292 (17) | 175 (3) |
| O5—H51⋯O1viii | 0.83 (3) | 1.87 (3) | 2.6842 (16) | 169 (3) |
Symmetry codes: (v) ; (vi) ; (vii) ; (viii) .