Literature DB >> 21520956

Structural mimicry of the α-helix in aqueous solution with an isoatomic α/β/γ-peptide backbone.

Tomohisa Sawada1, Samuel H Gellman.   

Abstract

Artificial mimicry of α-helices offers a basis for development of protein-protein interaction antagonists. Here we report a new type of unnatural peptidic backbone, containing α-, β-, and γ-amino acid residues in an αγααβα repeat pattern, for this purpose. This unnatural hexad has the same number of backbone atoms as a heptad of α residues. Two-dimensional NMR data clearly establish the formation of an α-helix-like conformation in aqueous solution. The helix formed by our 12-mer α/β/γ-peptide is considerably more stable than the α-helix formed by an analogous 14-mer α-peptide, presumably because of the preorganized β and γ residues employed.
© 2011 American Chemical Society

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Year:  2011        PMID: 21520956      PMCID: PMC3141811          DOI: 10.1021/ja202175a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  36 in total

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Authors:  B P Orner; J T Ernst; A D Hamilton
Journal:  J Am Chem Soc       Date:  2001-06-06       Impact factor: 15.419

2.  Helical beta-peptide inhibitors of the p53-hDM2 interaction.

Authors:  Joshua A Kritzer; James D Lear; Michael E Hodsdon; Alanna Schepartz
Journal:  J Am Chem Soc       Date:  2004-08-11       Impact factor: 15.419

Review 3.  The design of coiled-coil structures and assemblies.

Authors:  Derek N Woolfson
Journal:  Adv Protein Chem       Date:  2005

Review 4.  Helices and other secondary structures of beta- and gamma-peptides.

Authors:  Dieter Seebach; David F Hook; Alice Glättli
Journal:  Biopolymers       Date:  2006       Impact factor: 2.505

5.  Application of microwave irradiation to the synthesis of 14-helical beta-peptides.

Authors:  Justin K Murray; Samuel H Gellman
Journal:  Org Lett       Date:  2005-04-14       Impact factor: 6.005

6.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

7.  Rational development of beta-peptide inhibitors of human cytomegalovirus entry.

Authors:  Emily Payne English; Robert S Chumanov; Samuel H Gellman; Teresa Compton
Journal:  J Biol Chem       Date:  2005-11-07       Impact factor: 5.157

8.  An inhibitor of Bcl-2 family proteins induces regression of solid tumours.

Authors:  Tilman Oltersdorf; Steven W Elmore; Alexander R Shoemaker; Robert C Armstrong; David J Augeri; Barbara A Belli; Milan Bruncko; Thomas L Deckwerth; Jurgen Dinges; Philip J Hajduk; Mary K Joseph; Shinichi Kitada; Stanley J Korsmeyer; Aaron R Kunzer; Anthony Letai; Chi Li; Michael J Mitten; David G Nettesheim; ShiChung Ng; Paul M Nimmer; Jacqueline M O'Connor; Anatol Oleksijew; Andrew M Petros; John C Reed; Wang Shen; Stephen K Tahir; Craig B Thompson; Kevin J Tomaselli; Baole Wang; Michael D Wendt; Haichao Zhang; Stephen W Fesik; Saul H Rosenberg
Journal:  Nature       Date:  2005-05-15       Impact factor: 49.962

9.  Development of a potent Bcl-x(L) antagonist based on alpha-helix mimicry.

Authors:  Olaf Kutzki; Hyung Soon Park; Justin T Ernst; Brendan P Orner; Hang Yin; Andrew D Hamilton
Journal:  J Am Chem Soc       Date:  2002-10-09       Impact factor: 15.419

10.  In vivo activation of the p53 pathway by small-molecule antagonists of MDM2.

Authors:  Lyubomir T Vassilev; Binh T Vu; Bradford Graves; Daisy Carvajal; Frank Podlaski; Zoran Filipovic; Norman Kong; Ursula Kammlott; Christine Lukacs; Christian Klein; Nader Fotouhi; Emily A Liu
Journal:  Science       Date:  2004-01-02       Impact factor: 47.728

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  12 in total

Review 1.  Inhibition of α-helix-mediated protein-protein interactions using designed molecules.

Authors:  Valeria Azzarito; Kérya Long; Natasha S Murphy; Andrew J Wilson
Journal:  Nat Chem       Date:  2013-03       Impact factor: 24.427

2.  Nucleation effects in peptide foldamers.

Authors:  Anupam Patgiri; Stephen T Joy; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2012-07-05       Impact factor: 15.419

3.  Impact of Backbone Pattern and Residue Substitution on Helicity in α/β/γ-Peptides.

Authors:  Young-Hee Shin; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2018-01-19       Impact factor: 15.419

4.  Impact of γ-Amino Acid Residue Preorganization on α/γ-Peptide Foldamer Helicity in Aqueous Solution.

Authors:  Brian F Fisher; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2016-08-16       Impact factor: 15.419

5.  α-Helix mimicry with α/β-peptides.

Authors:  Lisa M Johnson; Samuel H Gellman
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

6.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419

Review 7.  Systematic Targeting of Protein-Protein Interactions.

Authors:  Ashley E Modell; Sarah L Blosser; Paramjit S Arora
Journal:  Trends Pharmacol Sci       Date:  2016-06-04       Impact factor: 14.819

8.  New preorganized γ-amino acids as foldamer building blocks.

Authors:  Li Guo; Weicheng Zhang; Ilia A Guzei; Lara C Spencer; Samuel H Gellman
Journal:  Org Lett       Date:  2012-05-08       Impact factor: 6.005

9.  Evaluation of a cyclopentane-based γ-amino acid for the ability to promote α/γ-peptide secondary structure.

Authors:  Michael W Giuliano; Stacy J Maynard; Aaron M Almeida; Andrew G Reidenbach; Li Guo; Emily C Ulrich; Ilia A Guzei; Samuel H Gellman
Journal:  J Org Chem       Date:  2013-12-05       Impact factor: 4.354

10.  Differential Effects of β3 - versus β2 -Amino Acid Residues on the Helicity and Recognition Properties of Bim BH3-Derived α/β-Peptides.

Authors:  Geoffrey A Eddinger; Samuel H Gellman
Journal:  Angew Chem Int Ed Engl       Date:  2018-09-20       Impact factor: 15.336

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