Literature DB >> 24303945

Evaluation of a cyclopentane-based γ-amino acid for the ability to promote α/γ-peptide secondary structure.

Michael W Giuliano1, Stacy J Maynard, Aaron M Almeida, Andrew G Reidenbach, Li Guo, Emily C Ulrich, Ilia A Guzei, Samuel H Gellman.   

Abstract

We report the asymmetric synthesis of the γ-amino acid (1R,2R)-2-aminomethyl-1-n class="Chemical">cyclopentane carboxylic acid (AMCP) and an evaluation of this residue's potential to promote secondary structure in α/γ-peptides. Simulated annealing calculations using NMR-derived distance restraints obtained for α/γ-peptides in chloroform reveal that AMCP-containing oligomers are conformationally flexible. However, additional evidence suggests that an internally hydrogen-bonded helical conformation is partially populated in solution. From these data, we propose characteristic NOE patterns for the formation of the α/γ-peptide 12/10-helix and discuss the apparent conformational frustration of AMCP-containing oligomers.

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Year:  2013        PMID: 24303945      PMCID: PMC4109159          DOI: 10.1021/jo401501g

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  35 in total

1.  Unique α,β- and α,α,β,β-peptide foldamers based on cis-β-aminocyclopentanecarboxylic acid.

Authors:  Łukasz Berlicki; Ludwig Pilsl; Edit Wéber; István M Mándity; Chiara Cabrele; Tamás A Martinek; Ferenc Fülöp; Oliver Reiser
Journal:  Angew Chem Int Ed Engl       Date:  2012-01-26       Impact factor: 15.336

2.  Side-chain control of folding of the homologous alpha-, beta-, and gamma-peptides into "mixed" helices (beta-helices).

Authors:  Carsten Baldauf; Robert Günther; Hans-Jörg Hofmann
Journal:  Biopolymers       Date:  2005       Impact factor: 2.505

3.  Helix formation in alpha,gamma- and beta,gamma-hybrid peptides: theoretical insights into mimicry of alpha- and beta-peptides.

Authors:  Carsten Baldauf; Robert Günther; Hans-Jörg Hofmann
Journal:  J Org Chem       Date:  2006-02-03       Impact factor: 4.354

4.  Version 1.2 of the Crystallography and NMR system.

Authors:  Axel T Brunger
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  Design of peptidic foldamer helices: a stereochemical patterning approach.

Authors:  István M Mándity; Edit Wéber; Tamás A Martinek; Gábor Olajos; Gábor K Tóth; Elemér Vass; Ferenc Fülöp
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

6.  Gamma2-, gamma3-, and gamma(2,3,4)-amino acids, coupling to gamma-hexapeptides: CD spectra, NMR solution and X-ray crystal structures of gamma-peptides.

Authors:  Dieter Seebach; Meinrad Brenner; Magnus Rueping; Bernhard Jaun
Journal:  Chemistry       Date:  2002-02-02       Impact factor: 5.236

7.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419

Review 8.  Gabapentin: a stereochemically constrained gamma amino acid residue in hybrid peptide design.

Authors:  Prema G Vasudev; Sunanda Chatterjee; Narayanaswamy Shamala; Padmanabhan Balaram
Journal:  Acc Chem Res       Date:  2009-10-20       Impact factor: 22.384

9.  Beta-peptidic peptidomimetics.

Authors:  Dieter Seebach; James Gardiner
Journal:  Acc Chem Res       Date:  2008-06-26       Impact factor: 22.384

10.  New preorganized γ-amino acids as foldamer building blocks.

Authors:  Li Guo; Weicheng Zhang; Ilia A Guzei; Lara C Spencer; Samuel H Gellman
Journal:  Org Lett       Date:  2012-05-08       Impact factor: 6.005

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  1 in total

1.  Synthesis of hybrid hydrazino peptides: protected vs unprotected chiral α-hydrazino acids.

Authors:  Josipa Suć; Ivanka Jerić
Journal:  Springerplus       Date:  2015-09-17
  1 in total

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