Literature DB >> 21513417

Michaelis-Menten relations for complex enzymatic networks.

Anatoly B Kolomeisky1.   

Abstract

Most biological processes are controlled by complex systems of enzymatic chemical reactions. Although the majority of enzymatic networks have very elaborate structures, there are many experimental observations indicating that some turnover rates still follow a simple Michaelis-Menten relation with a hyperbolic dependence on a substrate concentration. The original Michaelis-Menten mechanism has been derived as a steady-state approximation for a single-pathway enzymatic chain. The validity of this mechanism for many complex enzymatic systems is surprising. To determine general conditions when this relation might be observed in experiments, enzymatic networks consisting of coupled parallel pathways are investigated theoretically. It is found that the Michaelis-Menten equation is satisfied for specific relations between chemical rates, and it also corresponds to a situation with no fluxes between parallel pathways. Our results are illustrated for a simple model. The importance of the Michaelis-Menten relationship and derived criteria for single-molecule experimental studies of enzymatic processes are discussed.

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Year:  2011        PMID: 21513417      PMCID: PMC3094465          DOI: 10.1063/1.3580564

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  9 in total

1.  Transport of single molecules along the periodic parallel lattices with coupling.

Authors:  Evgeny B Stukalin; Anatoly B Kolomeisky
Journal:  J Chem Phys       Date:  2006-05-28       Impact factor: 3.488

2.  Theory of the statistics of kinetic transitions with application to single-molecule enzyme catalysis.

Authors:  Irina V Gopich; Attila Szabo
Journal:  J Chem Phys       Date:  2006-04-21       Impact factor: 3.488

3.  Single-molecule Michaelis-Menten equations.

Authors:  S C Kou; Binny J Cherayil; Wei Min; Brian P English; X Sunney Xie
Journal:  J Phys Chem B       Date:  2005-10-20       Impact factor: 2.991

4.  Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited.

Authors:  Brian P English; Wei Min; Antoine M van Oijen; Kang Taek Lee; Guobin Luo; Hongye Sun; Binny J Cherayil; S C Kou; X Sunney Xie
Journal:  Nat Chem Biol       Date:  2005-12-25       Impact factor: 15.040

5.  When does the Michaelis-Menten equation hold for fluctuating enzymes?

Authors:  Wei Min; Irina V Gopich; Brian P English; S C Kou; X Sunney Xie; Attila Szabo
Journal:  J Phys Chem B       Date:  2006-10-19       Impact factor: 2.991

6.  Dynamic properties of molecular motors in the divided-pathway model.

Authors:  Rahul Kumar Das; Anatoly B Kolomeisky
Journal:  Phys Chem Chem Phys       Date:  2009-04-09       Impact factor: 3.676

7.  Cooperativity and specificity in enzyme kinetics: a single-molecule time-based perspective.

Authors:  Hong Qian
Journal:  Biophys J       Date:  2008-04-25       Impact factor: 4.033

8.  Michaelis-Menten equation and detailed balance in enzymatic networks.

Authors:  Jianshu Cao
Journal:  J Phys Chem B       Date:  2011-04-05       Impact factor: 2.991

Review 9.  Molecular motors: a theorist's perspective.

Authors:  Anatoly B Kolomeisky; Michael E Fisher
Journal:  Annu Rev Phys Chem       Date:  2007       Impact factor: 12.703

  9 in total
  5 in total

1.  Enzymatic turnover of macromolecules generates long-lasting protein-water-coupled motions beyond reaction steady state.

Authors:  Jessica Dielmann-Gessner; Moran Grossman; Valeria Conti Nibali; Benjamin Born; Inna Solomonov; Gregg B Fields; Martina Havenith; Irit Sagi
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-25       Impact factor: 11.205

2.  Structural conditions on complex networks for the Michaelis-Menten input-output response.

Authors:  Felix Wong; Annwesha Dutta; Debashish Chowdhury; Jeremy Gunawardena
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-07       Impact factor: 11.205

3.  Dependence of the Enzymatic Velocity on the Substrate Dissociation Rate.

Authors:  Alexander M Berezhkovskii; Attila Szabo; T Rotbart; M Urbakh; Anatoly B Kolomeisky
Journal:  J Phys Chem B       Date:  2016-12-01       Impact factor: 2.991

Review 4.  Motor proteins and molecular motors: how to operate machines at the nanoscale.

Authors:  Anatoly B Kolomeisky
Journal:  J Phys Condens Matter       Date:  2013-10-07       Impact factor: 2.333

5.  Feasibility of a Novel Mobile C-Reactive Protein-Testing Device Using Gold-Linked Electrochemical Immunoassay: Clinical Performance Study.

Authors:  Yuko Gondoh-Noda; Mitsuhiro Kometani; Akihiro Nomura; Daisuke Aono; Shigehiro Karashima; Hiromi Ushijima; Eiichi Tamiya; Toshinori Murayama; Takashi Yoneda
Journal:  JMIR Mhealth Uhealth       Date:  2020-09-07       Impact factor: 4.773

  5 in total

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