Literature DB >> 17163836

Molecular motors: a theorist's perspective.

Anatoly B Kolomeisky1, Michael E Fisher.   

Abstract

Individual molecular motors, or motor proteins, are enzymatic molecules that convert chemical energy, typically obtained from the hydrolysis of ATP (adenosine triphosphate), into mechanical work and motion. Processive motor proteins, such as kinesin, dynein, and certain myosins, step unidirectionally along linear tracks, specifically microtubules and actin filaments, and play a crucial role in cellular transport processes, organization, and function. In this review some theoretical aspects of motor-protein dynamics are presented in the light of current experimental methods that enable the measurement of the biochemical and biomechanical properties on a single-molecule basis. After a brief discussion of continuum ratchet concepts, we focus on discrete kinetic and stochastic models that yield predictions for the mean velocity, V(F, [ATP], ...), and other observables as a function of an imposed load force F, the ATP concentration, and other variables. The combination of appropriate theory with single-molecule observations should help uncover the mechanisms underlying motor-protein function.

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Year:  2007        PMID: 17163836     DOI: 10.1146/annurev.physchem.58.032806.104532

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


  95 in total

1.  DYNAMICS OF SINGLE-MOLECULE ROTATIONS ON SURFACES DEPEND ON SYMMETRY, INTERACTIONS AND MOLECULAR SIZES.

Authors:  Alexey Akimov; Anatoly B Kolomeisky
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2011-01-01       Impact factor: 4.126

2.  Structural mechanism of the ATP-induced dissociation of rigor myosin from actin.

Authors:  Sebastian Kühner; Stefan Fischer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

3.  Electrostatic origin of the mechanochemical rotary mechanism and the catalytic dwell of F1-ATPase.

Authors:  Shayantani Mukherjee; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

4.  How the interplay between mechanical and nonmechanical interactions affects multiple kinesin dynamics.

Authors:  Karthik Uppulury; Artem K Efremov; Jonathan W Driver; D Kenneth Jamison; Michael R Diehl; Anatoly B Kolomeisky
Journal:  J Phys Chem B       Date:  2012-07-11       Impact factor: 2.991

5.  Mechanistic constraints from the substrate concentration dependence of enzymatic fluctuations.

Authors:  Jeffrey R Moffitt; Yann R Chemla; Carlos Bustamante
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-20       Impact factor: 11.205

Review 6.  Thermodynamics and kinetics of molecular motors.

Authors:  R Dean Astumian
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

7.  Improved hidden Markov models for molecular motors, part 1: basic theory.

Authors:  Fiona E Müllner; Sheyum Syed; Paul R Selvin; Fred J Sigworth
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

8.  Biased Brownian motion as a mechanism to facilitate nanometer-scale exploration of the microtubule plus end by a kinesin-8.

Authors:  Yongdae Shin; Yaqing Du; Scott E Collier; Melanie D Ohi; Matthew J Lang; Ryoma Ohi
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

9.  Distributions of lifetime and maximum size of abortive clathrin-coated pits.

Authors:  Anand Banerjee; Alexander Berezhkovskii; Ralph Nossal
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-07

Review 10.  Redefining the roles of the FtsZ-ring in bacterial cytokinesis.

Authors:  Jie Xiao; Erin D Goley
Journal:  Curr Opin Microbiol       Date:  2016-09-10       Impact factor: 7.934

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