Literature DB >> 21513331

Comparative analysis of viscosity of complex liquids and cytoplasm of mammalian cells at the nanoscale.

Tomasz Kalwarczyk1, Natalia Ziebacz, Anna Bielejewska, Ewa Zaboklicka, Kaloian Koynov, Jedrzej Szymański, Agnieszka Wilk, Adam Patkowski, Jacek Gapiński, Hans-Jürgen Butt, Robert Hołyst.   

Abstract

We present a scaling formula for size-dependent viscosity coefficients for proteins, polymers, and fluorescent dyes diffusing in complex liquids. The formula was used to analyze the mobilities of probes of different sizes in HeLa and Swiss 3T3 mammalian cells. This analysis unveils in the cytoplasm two length scales: (i) the correlation length ξ (approximately 5 nm in HeLa and 7 nm in Swiss 3T3 cells) and (ii) the limiting length scale that marks the crossover between nano- and macroscale viscosity (approximately 86 nm in HeLa and 30 nm in Swiss 3T3 cells). During motion, probes smaller than ξ experienced matrix viscosity: η(matrix) ≈ 2.0 mPa·s for HeLa and 0.88 mPa·s for Swiss 3T3 cells. Probes much larger than the limiting length scale experienced macroscopic viscosity, η(macro) ≈ 4.4 × 10(-2) and 2.4 × 10(-2) Pa·s for HeLa and Swiss 3T3 cells, respectively. Our results are persistent for the lengths scales from 0.14 nm to a few hundred nanometers.

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Year:  2011        PMID: 21513331     DOI: 10.1021/nl2008218

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  52 in total

1.  Predictive Spatiotemporal Manipulation of Signaling Perturbations Using Optogenetics.

Authors:  Leo Valon; Fred Etoc; Amanda Remorino; Florencia di Pietro; Xavier Morin; Maxime Dahan; Mathieu Coppey
Journal:  Biophys J       Date:  2015-11-03       Impact factor: 4.033

2.  Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells.

Authors:  Iwo König; Arash Zarrine-Afsar; Mikayel Aznauryan; Andrea Soranno; Bengt Wunderlich; Fabian Dingfelder; Jakob C Stüber; Andreas Plückthun; Daniel Nettels; Benjamin Schuler
Journal:  Nat Methods       Date:  2015-07-06       Impact factor: 28.547

3.  Measuring Intracellular Viscosity in Conditions of Hypergravity.

Authors:  Emma M Woodcock; Paul Girvan; Julia Eckert; Ismael Lopez-Duarte; Markéta Kubánková; Jack J W A van Loon; Nicholas J Brooks; Marina K Kuimova
Journal:  Biophys J       Date:  2019-04-08       Impact factor: 4.033

Review 4.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

Review 5.  Unite to divide - how models and biological experimentation have come together to reveal mechanisms of cytokinesis.

Authors:  Daniel B Cortes; Adriana Dawes; Jian Liu; Masoud Nickaeen; Wanda Strychalski; Amy Shaub Maddox
Journal:  J Cell Sci       Date:  2018-12-18       Impact factor: 5.285

6.  Stochastic transitions in a bistable reaction system on the membrane.

Authors:  Marek Kochanczyk; Joanna Jaruszewicz; Tomasz Lipniacki
Journal:  J R Soc Interface       Date:  2013-05-01       Impact factor: 4.118

7.  Understanding the mechanism of proteasome 20S core particle gating.

Authors:  Michael P Latham; Ashok Sekhar; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-31       Impact factor: 11.205

8.  Furrow constriction in animal cell cytokinesis.

Authors:  Hervé Turlier; Basile Audoly; Jacques Prost; Jean-François Joanny
Journal:  Biophys J       Date:  2014-01-07       Impact factor: 4.033

Review 9.  Physicochemical properties of cells and their effects on intrinsically disordered proteins (IDPs).

Authors:  Francois-Xavier Theillet; Andres Binolfi; Tamara Frembgen-Kesner; Karan Hingorani; Mohona Sarkar; Ciara Kyne; Conggang Li; Peter B Crowley; Lila Gierasch; Gary J Pielak; Adrian H Elcock; Anne Gershenson; Philipp Selenko
Journal:  Chem Rev       Date:  2014-06-05       Impact factor: 60.622

10.  Light-sheet microscopy with digital Fourier analysis measures transport properties over large field-of-view.

Authors:  Devynn M Wulstein; Kathryn E Regan; Rae M Robertson-Anderson; Ryan McGorty
Journal:  Opt Express       Date:  2016-09-05       Impact factor: 3.894

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