Literature DB >> 21501670

Adductomics: characterizing exposures to reactive electrophiles.

Stephen M Rappaport1, He Li, Hasmik Grigoryan, William E Funk, Evan R Williams.   

Abstract

To understand environmental causes of disease, unbiased methods are needed to characterize the human exposome, which represents all toxicants to which people are exposed from both exogenous and endogenous sources. Because they directly modify DNA and important proteins, reactive electrophiles are probably the most important constituents of the exposome. Exposures to reactive electrophiles can be characterized by measuring adducts from reactions between circulating electrophiles and blood nucleophiles. We define an 'adductome' as the totality of such adducts with a given nucleophilic target. Because of their greater abundance and residence times in human blood, adducts of hemoglobin (Hb) and human serum albumin (HSA) are preferable to those of DNA and glutathione for characterizing adductomes. In fact, the nucleophilic hotspot represented by the only free sulfhydryl group in HSA (HSA-Cys(34)) offers particular advantages for adductomic experiments. Although targeted adducts of HSA-Cys(34) have been monitored for decades, an unbiased method has only recently been reported for visualizing the HSA-Cys(34) 'subadductome'. The method relies upon a novel mass spectrometry application, termed fixed-step selected reaction monitoring (FS-SRM), to profile Cys(34) adducts in tryptic digests of HSA. Here, we selectively review the literature regarding the potential of adductomics to partially elucidate the human exposome, with particular attention to the HSA-Cys(34) subadductome.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

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Year:  2011        PMID: 21501670      PMCID: PMC4758449          DOI: 10.1016/j.toxlet.2011.04.002

Source DB:  PubMed          Journal:  Toxicol Lett        ISSN: 0378-4274            Impact factor:   4.372


  55 in total

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Authors:  M Törnqvist; C Fred; J Haglund; H Helleberg; B Paulsson; P Rydberg
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2002-10-05       Impact factor: 3.205

2.  Degree of alkylation of macromolecules in vivo from variable exposure.

Authors:  F Granath; L Ehrenberg; M Törnqvist
Journal:  Mutat Res       Date:  1992-12-16       Impact factor: 2.433

3.  Albumin adducts of benzene oxide and 1,4-benzoquinone as measures of human benzene metabolism.

Authors:  Stephen M Rappaport; Suramya Waidyanatha; Qingshan Qu; Roy Shore; Ximei Jin; Beverly Cohen; Lung-Chi Chen; Assieh A Melikian; Guilan Li; Songnian Yin; Huifang Yan; Bohong Xu; Ruidong Mu; Yuying Li; Xiaoling Zhang; Keqi Li
Journal:  Cancer Res       Date:  2002-03-01       Impact factor: 12.701

4.  Epidemiologic studies of coronary heart disease and stroke in Japanese men living in Japan, Hawaii and California.

Authors:  H Kato; J Tillotson; M Z Nichaman; G G Rhoads; H B Hamilton
Journal:  Am J Epidemiol       Date:  1973-06       Impact factor: 4.897

5.  Nitroproteins from a human pituitary adenoma tissue discovered with a nitrotyrosine affinity column and tandem mass spectrometry.

Authors:  Xianquan Zhan; Dominic M Desiderio
Journal:  Anal Biochem       Date:  2006-06-05       Impact factor: 3.365

6.  Mass spectrometric characterization of covalent modification of human serum albumin by 4-hydroxy-trans-2-nonenal.

Authors:  Giancarlo Aldini; Luca Gamberoni; Marica Orioli; Giangiacomo Beretta; Luca Regazzoni; Roberto Maffei Facino; Marina Carini
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7.  Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

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8.  An Environment-Wide Association Study (EWAS) on type 2 diabetes mellitus.

Authors:  Chirag J Patel; Jayanta Bhattacharya; Atul J Butte
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Review 9.  The plasma proteome, adductome and idiosyncratic toxicity in toxicoproteomics research.

Authors:  B Alex Merrick
Journal:  Brief Funct Genomic Proteomic       Date:  2008-02-12

10.  Sulfenic acid formation in human serum albumin by hydrogen peroxide and peroxynitrite.

Authors:  Sebastián Carballal; Rafael Radi; Marion C Kirk; Stephen Barnes; Bruce A Freeman; Beatriz Alvarez
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  62 in total

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Review 2.  Detection of electrophile-sensitive proteins.

Authors:  Stephanie B Wall; M Ryan Smith; Karina Ricart; Fen Zhou; Praveen K Vayalil; Joo-Yeun Oh; Aimee Landar
Journal:  Biochim Biophys Acta       Date:  2013-09-08

3.  Urinary DNA adductomics - A novel approach for exposomics.

Authors:  Marcus S Cooke; Chiung-Wen Hu; Yuan-Jhe Chang; Mu-Rong Chao
Journal:  Environ Int       Date:  2018-11-02       Impact factor: 9.621

4.  An enhanced throughput method for quantification of sulfur mustard adducts to human serum albumin via isotope dilution tandem mass spectrometry.

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Journal:  J Anal Toxicol       Date:  2013-11-07       Impact factor: 3.367

5.  Mass spectrometric characterization of 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine N-oxidized metabolites bound at Cys34 of human serum albumin.

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Journal:  Chem Res Toxicol       Date:  2011-10-04       Impact factor: 3.739

Review 6.  The cysteine proteome.

Authors:  Young-Mi Go; Joshua D Chandler; Dean P Jones
Journal:  Free Radic Biol Med       Date:  2015-04-03       Impact factor: 7.376

Review 7.  From the exposome to mechanistic understanding of chemical-induced adverse effects.

Authors:  Beate I Escher; Jörg Hackermüller; Tobias Polte; Stefan Scholz; Achim Aigner; Rolf Altenburger; Alexander Böhme; Stephanie K Bopp; Werner Brack; Wibke Busch; Marc Chadeau-Hyam; Adrian Covaci; Adolf Eisenträger; James J Galligan; Natalia Garcia-Reyero; Thomas Hartung; Michaela Hein; Gunda Herberth; Annika Jahnke; Jos Kleinjans; Nils Klüver; Martin Krauss; Marja Lamoree; Irina Lehmann; Till Luckenbach; Gary W Miller; Andrea Müller; David H Phillips; Thorsten Reemtsma; Ulrike Rolle-Kampczyk; Gerrit Schüürmann; Benno Schwikowski; Yu-Mei Tan; Saskia Trump; Susanne Walter-Rohde; John F Wambaugh
Journal:  Environ Int       Date:  2016-12-08       Impact factor: 9.621

Review 8.  Blood-borne biomarkers and bioindicators for linking exposure to health effects in environmental health science.

Authors:  M Ariel Geer Wallace; Tzipporah M Kormos; Joachim D Pleil
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9.  Capturing labile sulfenamide and sulfinamide serum albumin adducts of carcinogenic arylamines by chemical oxidation.

Authors:  Lijuan Peng; Robert J Turesky
Journal:  Anal Chem       Date:  2012-12-28       Impact factor: 6.986

10.  Mapping Proteome-Wide Targets of Environmental Chemicals Using Reactivity-Based Chemoproteomic Platforms.

Authors:  Daniel Medina-Cleghorn; Leslie A Bateman; Breanna Ford; Ann Heslin; Karl J Fisher; Esha D Dalvie; Daniel K Nomura
Journal:  Chem Biol       Date:  2015-10-22
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