Literature DB >> 27696315

Methylophaga and Hyphomicrobium can be used as target genera in monitoring saline water methanol-utilizing denitrification.

Antti J Rissanen1,2, Anne Ojala3,4, Markus Dernjatin5, Jouni Jaakkola5, Marja Tiirola6.   

Abstract

Which bacterial taxonomic groups can be used in monitoring saline water methanol-utilizing denitrification and whether nitrate is transformed into N2 in the process are unclear. Therefore, methylotrophic bacterial communities of two efficiently functioning (nitrate/nitrite reduction was 63-96 %) tropical and cool seawater reactors at a public aquarium were investigated with clone library analysis and 454 pyrosequencing of the 16S rRNA genes. Transformation of nitrate into N2 was confirmed using 15N labeling in incubation of carrier material from the tropical reactor. Combining the data with previous study results, Methylophaga and Hyphomicrobium were determined to be suitable target genera for monitoring the function of saline water methanol-fed denitrification systems. However, monitoring was not possible at the single species level. Interestingly, potential nitrate-reducing methylotrophs within Filomicrobium and closely related Fil I and Fil II clusters were detected in the reactors suggesting that they also contributed to methylotrophic denitrification in the saline environment.

Entities:  

Keywords:  16S rRNA; Denitrification; Methylotrophy; Reactor; Saline water

Mesh:

Substances:

Year:  2016        PMID: 27696315     DOI: 10.1007/s10295-016-1839-2

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  40 in total

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2.  Stable-isotope probing implicates Methylophaga spp and novel Gammaproteobacteria in marine methanol and methylamine metabolism.

Authors:  Josh D Neufeld; Hendrik Schäfer; Michael J Cox; Rich Boden; Ian R McDonald; J Colin Murrell
Journal:  ISME J       Date:  2007-08-09       Impact factor: 10.302

3.  Impact of varying electron donors on the molecular microbial ecology and biokinetics of methylotrophic denitrifying bacteria.

Authors:  Vladimir Baytshtok; Huijie Lu; Hongkeun Park; Sungpyo Kim; Ran Yu; Kartik Chandran
Journal:  Biotechnol Bioeng       Date:  2009-04-15       Impact factor: 4.530

4.  Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Authors:  Naomi L Ward; Jean F Challacombe; Peter H Janssen; Bernard Henrissat; Pedro M Coutinho; Martin Wu; Gary Xie; Daniel H Haft; Michelle Sait; Jonathan Badger; Ravi D Barabote; Brent Bradley; Thomas S Brettin; Lauren M Brinkac; David Bruce; Todd Creasy; Sean C Daugherty; Tanja M Davidsen; Robert T DeBoy; J Chris Detter; Robert J Dodson; A Scott Durkin; Anuradha Ganapathy; Michelle Gwinn-Giglio; Cliff S Han; Hoda Khouri; Hajnalka Kiss; Sagar P Kothari; Ramana Madupu; Karen E Nelson; William C Nelson; Ian Paulsen; Kevin Penn; Qinghu Ren; M J Rosovitz; Jeremy D Selengut; Susmita Shrivastava; Steven A Sullivan; Roxanne Tapia; L Sue Thompson; Kisha L Watkins; Qi Yang; Chunhui Yu; Nikhat Zafar; Liwei Zhou; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

5.  Stable isotope profiles of nitrogen gas indicate denitrification in oxygen-stratified humic lakes.

Authors:  Marja A Tiirola; Antti J Rissanen; Miika Sarpakunnas; Lauri Arvola; Hannu Nykänen
Journal:  Rapid Commun Mass Spectrom       Date:  2011-06-15       Impact factor: 2.419

6.  Seawater denitrification in a closed mesocosm by a submerged moving bed biofilm reactor.

Authors:  Marc-André Labelle; Pierre Juteau; Mario Jolicoeur; Richard Villemur; Serge Parent; Yves Comeau
Journal:  Water Res       Date:  2005-09       Impact factor: 11.236

7.  Addition of trace metals increases denitrification rate in closed marine systems.

Authors:  Normand Labbé; Serge Parent; Richard Villemur
Journal:  Water Res       Date:  2003-02       Impact factor: 11.236

8.  Methane assimilation and trophic interactions with marine Methylomicrobium in deep-water coral reef sediment off the coast of Norway.

Authors:  Sigmund Jensen; Josh D Neufeld; Nils-Kåre Birkeland; Martin Hovland; John Colin Murrell
Journal:  FEMS Microbiol Ecol       Date:  2008-09-22       Impact factor: 4.194

9.  Flavobacterium glycines sp. nov., a facultative methylotroph isolated from the rhizosphere of soybean.

Authors:  Munusamy Madhaiyan; Selvaraj Poonguzhali; Jung-Sook Lee; Keun Chul Lee; Subbiah Sundaram
Journal:  Int J Syst Evol Microbiol       Date:  2009-11-06       Impact factor: 2.747

10.  Complete Genome Sequences of Two Strains of "Candidatus Filomicrobium marinum," a Methanesulfonate-Degrading Species.

Authors:  Ana C Henriques; Paolo De Marco
Journal:  Genome Announc       Date:  2015-05-07
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  7 in total

1.  Methylophilaceae and Hyphomicrobium as target taxonomic groups in monitoring the function of methanol-fed denitrification biofilters in municipal wastewater treatment plants.

Authors:  Antti J Rissanen; Anne Ojala; Tommi Fred; Jyrki Toivonen; Marja Tiirola
Journal:  J Ind Microbiol Biotechnol       Date:  2016-11-08       Impact factor: 3.346

2.  Watershed Urbanization Linked to Differences in Stream Bacterial Community Composition.

Authors:  Jacob D Hosen; Catherine M Febria; Byron C Crump; Margaret A Palmer
Journal:  Front Microbiol       Date:  2017-08-02       Impact factor: 5.640

3.  Strain-level genetic diversity of Methylophaga nitratireducenticrescens confers plasticity to denitrification capacity in a methylotrophic marine denitrifying biofilm.

Authors:  Valérie Geoffroy; Geneviève Payette; Florian Mauffrey; Livie Lestin; Philippe Constant; Richard Villemur
Journal:  PeerJ       Date:  2018-04-23       Impact factor: 2.984

4.  Dynamics of a methanol-fed marine denitrifying biofilm: 1-Impact of environmental changes on the denitrification and the co-occurrence of Methylophaga nitratireducenticrescens and Hyphomicrobium nitrativorans.

Authors:  Geneviève Payette; Valérie Geoffroy; Christine Martineau; Richard Villemur
Journal:  PeerJ       Date:  2019-08-13       Impact factor: 2.984

5.  Dynamics of a methanol-fed marine denitrifying biofilm: 2-impact of environmental changes on the microbial community.

Authors:  Richard Villemur; Geneviève Payette; Valérie Geoffroy; Florian Mauffrey; Christine Martineau
Journal:  PeerJ       Date:  2019-08-13       Impact factor: 2.984

6.  Co-culturing Hyphomicrobium nitrativorans strain NL23 and Methylophaga nitratireducenticrescens strain JAM1 allows sustainable denitrifying activities under marine conditions.

Authors:  Alexandra Cucaita; Marianne Piochon; Richard Villemur
Journal:  PeerJ       Date:  2021-11-01       Impact factor: 2.984

7.  Denitrifying metabolism of the methylotrophic marine bacterium Methylophaga nitratireducenticrescens strain JAM1.

Authors:  Florian Mauffrey; Alexandra Cucaita; Philippe Constant; Richard Villemur
Journal:  PeerJ       Date:  2017-11-28       Impact factor: 2.984

  7 in total

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