Literature DB >> 21472697

DNA ligases.

Gregory J S Lohman1, Stanley Tabor, Nicole M Nichols.   

Abstract

The DNA ligase enzyme family catalyzes the formation of a phosphodiester bond between juxtaposed 5'-phosphate and 3'-hydroxyl termini in duplex DNA. This activity can seal nicks in duplex DNA or join double-stranded DNA fragments having either blunt or cohesive ends. DNA ligases are central enzymes in molecular biology, nucleic acid research, and in next-generation sequencing applications. Reaction conditions and applications for T4 DNA ligase, E. coli DNA ligase, and thermostable DNA ligases are described in this unit. These enzymes differ in their cofactor requirements, substrate specificity, and thermal stability.
© 2011 by John Wiley & Sons, Inc.

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Year:  2011        PMID: 21472697     DOI: 10.1002/0471142727.mb0314s94

Source DB:  PubMed          Journal:  Curr Protoc Mol Biol        ISSN: 1934-3647


  9 in total

1.  Design, synthesis, and application of the trimethoprim-based chemical tag for live-cell imaging.

Authors:  Chaoran Jing; Virginia W Cornish
Journal:  Curr Protoc Chem Biol       Date:  2013

Review 2.  In vitro circularization of RNA.

Authors:  Sabine Müller; Bettina Appel
Journal:  RNA Biol       Date:  2016-09-26       Impact factor: 4.652

Review 3.  The design and synthesis of circular RNAs.

Authors:  Prisca Obi; Y Grace Chen
Journal:  Methods       Date:  2021-03-02       Impact factor: 3.608

4.  Kinetic characterization of single strand break ligation in duplex DNA by T4 DNA ligase.

Authors:  Gregory J S Lohman; Lixin Chen; Thomas C Evans
Journal:  J Biol Chem       Date:  2011-10-25       Impact factor: 5.157

Review 5.  RNA circularization strategies in vivo and in vitro.

Authors:  Sonja Petkovic; Sabine Müller
Journal:  Nucleic Acids Res       Date:  2015-02-06       Impact factor: 16.971

6.  Bacteriophage origin of some minimal ATP-dependent DNA ligases: a new structure from Burkholderia pseudomallei with striking similarity to Chlorella virus ligase.

Authors:  Jolyn Pan; Kjersti Lian; Aili Sarre; Hanna-Kirsti S Leiros; Adele Williamson
Journal:  Sci Rep       Date:  2021-09-21       Impact factor: 4.379

7.  A high-throughput assay for the comprehensive profiling of DNA ligase fidelity.

Authors:  Gregory J S Lohman; Robert J Bauer; Nicole M Nichols; Laurie Mazzola; Joanna Bybee; Danielle Rivizzigno; Elizabeth Cantin; Thomas C Evans
Journal:  Nucleic Acids Res       Date:  2015-09-13       Impact factor: 16.971

Review 8.  From Structure-Function Analyses to Protein Engineering for Practical Applications of DNA Ligase.

Authors:  Maiko Tanabe; Yoshizumi Ishino; Hirokazu Nishida
Journal:  Archaea       Date:  2015-10-05       Impact factor: 3.273

Review 9.  Archaeal Nucleic Acid Ligases and Their Potential in Biotechnology.

Authors:  Cecilia R Chambers; Wayne M Patrick
Journal:  Archaea       Date:  2015-10-01       Impact factor: 3.273

  9 in total

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