Literature DB >> 21465563

Conformational dynamics of recoverin's Ca2+-myristoyl switch probed by 15N NMR relaxation dispersion and chemical shift analysis.

Xianzhong Xu1, Rieko Ishima, James B Ames.   

Abstract

Recoverin, a member of the neuronal calcium sensor (NCS) branch of the calmodulin superfamily, serves as a calcium sensor in retinal rod cells. Ca(2+) -induced conformational changes in recoverin promote extrusion of its covalently attached myristate, known as the Ca(2+)-myristoyl switch. Here, we present nuclear magnetic resonance (NMR) relaxation dispersion and chemical shift analysis on (15) N-labeled recoverin to probe main chain conformational dynamics. (15) N NMR relaxation data suggest that Ca(2+)-free recoverin undergoes millisecond conformational dynamics at particular amide sites throughout the protein. The addition of trace Ca(2+) levels (0.05 equivalents) increases the number of residues that show detectable relaxation dispersion. The Ca(2+)-dependent chemical shifts and relaxation dispersion suggest that recoverin has an intermediate conformational state (I) between the sequestered apo state (T) and Ca(2+) saturated extruded state (R): T ↔ I ↔ R. The first step is a fast conformational equilibrium ([T]/[I] < 100) on the millisecond time scale (τ(ex) δω < 1). The final step (I ↔ R) is much slower (τ(ex) δω > 1). The main chain structure of I is similar in part to the structure of half-saturated E85Q recoverin with a sequestered myristoyl group. We propose that millisecond dynamics during T ↔ I may transiently increase the exposure of Ca(2+)-binding sites to initiate Ca(2+) binding that drives extrusion of the myristoyl group during I ↔ R.
Copyright © 2011 Wiley-Liss, Inc.

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Year:  2011        PMID: 21465563      PMCID: PMC3092842          DOI: 10.1002/prot.23014

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  44 in total

1.  Target enzyme recognition by calmodulin: 2.4 A structure of a calmodulin-peptide complex.

Authors:  W E Meador; A R Means; F A Quiocho
Journal:  Science       Date:  1992-08-28       Impact factor: 47.728

2.  Solution structure of a calmodulin-target peptide complex by multidimensional NMR.

Authors:  M Ikura; G M Clore; A M Gronenborn; G Zhu; C B Klee; A Bax
Journal:  Science       Date:  1992-05-01       Impact factor: 47.728

3.  Recoverin: a calcium sensitive activator of retinal rod guanylate cyclase.

Authors:  A M Dizhoor; S Ray; S Kumar; G Niemi; M Spencer; D Brolley; K A Walsh; P P Philipov; J B Hurley; L Stryer
Journal:  Science       Date:  1991-02-22       Impact factor: 47.728

4.  Rapid structural fluctuations of the free HIV protease flaps in solution: relationship to crystal structures and comparison with predictions of dynamics calculations.

Authors:  Darón I Freedberg; Rieko Ishima; Jaison Jacob; Yun-Xing Wang; Irina Kustanovich; John M Louis; Dennis A Torchia
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

5.  The effect of recoverin-like calcium-binding proteins on the photoresponse of retinal rods.

Authors:  M P Gray-Keller; A S Polans; K Palczewski; P B Detwiler
Journal:  Neuron       Date:  1993-03       Impact factor: 17.173

6.  Role of the acylated amino terminus of recoverin in Ca(2+)-dependent membrane interaction.

Authors:  A M Dizhoor; C K Chen; E Olshevskaya; V V Sinelnikova; P Phillipov; J B Hurley
Journal:  Science       Date:  1993-02-05       Impact factor: 47.728

7.  Recoverin regulates light-dependent phosphodiesterase activity in retinal rods.

Authors:  Clint L Makino; R L Dodd; J Chen; M E Burns; A Roca; M I Simon; D A Baylor
Journal:  J Gen Physiol       Date:  2004-06       Impact factor: 4.086

8.  Calcium-myristoyl protein switch.

Authors:  S Zozulya; L Stryer
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-01       Impact factor: 11.205

9.  Structure, topology, and dynamics of myristoylated recoverin bound to phospholipid bilayers.

Authors:  Kathleen G Valentine; Michael F Mesleh; Stanley J Opella; Mitsuhiko Ikura; James B Ames
Journal:  Biochemistry       Date:  2003-06-03       Impact factor: 3.162

10.  Rhodopsin phosphorylation as a mechanism of cyclic GMP phosphodiesterase regulation by S-modulin.

Authors:  S Kawamura
Journal:  Nature       Date:  1993-04-29       Impact factor: 49.962

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  7 in total

Review 1.  Photoreceptor signaling: supporting vision across a wide range of light intensities.

Authors:  Vadim Y Arshavsky; Marie E Burns
Journal:  J Biol Chem       Date:  2011-11-10       Impact factor: 5.157

2.  Double electron-electron resonance probes Ca²⁺-induced conformational changes and dimerization of recoverin.

Authors:  William K Myers; Xianzhong Xu; Congmin Li; Jens O Lagerstedt; Madhu S Budamagunta; John C Voss; R David Britt; James B Ames
Journal:  Biochemistry       Date:  2013-08-16       Impact factor: 3.162

3.  Calcium causes a conformational change in lamin A tail domain that promotes farnesyl-mediated membrane association.

Authors:  Agnieszka Kalinowski; Zhao Qin; Kelli Coffey; Ravi Kodali; Markus J Buehler; Mathias Lösche; Kris Noel Dahl
Journal:  Biophys J       Date:  2013-05-21       Impact factor: 4.033

4.  Structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) Mutant V77E in a Ca2+-free/Mg2+-bound Activator State.

Authors:  Sunghyuk Lim; Igor V Peshenko; Elena V Olshevskaya; Alexander M Dizhoor; James B Ames
Journal:  J Biol Chem       Date:  2015-12-24       Impact factor: 5.157

5.  Characterisation of the interaction of the C-terminus of the dopamine D2 receptor with neuronal calcium sensor-1.

Authors:  Lu-Yun Lian; Sravan R Pandalaneni; Pryank Patel; Hannah V McCue; Lee P Haynes; Robert D Burgoyne
Journal:  PLoS One       Date:  2011-11-16       Impact factor: 3.240

Review 6.  Structural diversity of neuronal calcium sensor proteins and insights for activation of retinal guanylyl cyclase by GCAP1.

Authors:  Sunghyuk Lim; Alexander M Dizhoor; James B Ames
Journal:  Front Mol Neurosci       Date:  2014-03-17       Impact factor: 5.639

7.  Structural insights for activation of retinal guanylate cyclase by GCAP1.

Authors:  Sunghyuk Lim; Igor V Peshenko; Alexander M Dizhoor; James B Ames
Journal:  PLoS One       Date:  2013-11-13       Impact factor: 3.240

  7 in total

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