Literature DB >> 26703466

Structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) Mutant V77E in a Ca2+-free/Mg2+-bound Activator State.

Sunghyuk Lim1, Igor V Peshenko2, Elena V Olshevskaya2, Alexander M Dizhoor2, James B Ames3.   

Abstract

GCAP1, a member of the neuronal calcium sensor subclass of the calmodulin superfamily, confers Ca(2+)-sensitive activation of retinal guanylyl cyclase 1 (RetGC1). We present NMR resonance assignments, residual dipolar coupling data, functional analysis, and a structural model of GCAP1 mutant (GCAP1(V77E)) in the Ca(2+)-free/Mg(2+)-bound state. NMR chemical shifts and residual dipolar coupling data reveal Ca(2+)-dependent differences for residues 170-174. An NMR-derived model of GCAP1(V77E) contains Mg(2+) bound at EF2 and looks similar to Ca(2+) saturated GCAP1 (root mean square deviations = 2.0 Å). Ca(2+)-dependent structural differences occur in the fourth EF-hand (EF4) and adjacent helical region (residues 164-174 called the Ca(2+) switch helix). Ca(2+)-induced shortening of the Ca(2+) switch helix changes solvent accessibility of Thr-171 and Leu-174 that affects the domain interface. Although the Ca(2+) switch helix is not part of the RetGC1 binding site, insertion of an extra Gly residue between Ser-173 and Leu-174 as well as deletion of Arg-172, Ser-173, or Leu-174 all caused a decrease in Ca(2+) binding affinity and abolished RetGC1 activation. We conclude that Ca(2+)-dependent conformational changes in the Ca(2+) switch helix are important for activating RetGC1 and provide further support for a Ca(2+)-myristoyl tug mechanism.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  calcium; calcium-binding protein; calorimetry; guanylate cyclase (guanylyl cyclase); nuclear magnetic resonance (NMR); phototransduction; vision

Mesh:

Substances:

Year:  2015        PMID: 26703466      PMCID: PMC4813471          DOI: 10.1074/jbc.M115.696161

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

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Authors:  Charles D Schwieters; John J Kuszewski; Nico Tjandra; G Marius Clore
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2.  Ca2+-dependent conformational changes in bovine GCAP-2.

Authors:  R E Hughes; P S Brzovic; A M Dizhoor; R E Klevit; J B Hurley
Journal:  Protein Sci       Date:  1998-12       Impact factor: 6.725

3.  Structure of a Ca2+-myristoyl switch protein that controls activation of a phosphatidylinositol 4-kinase in fission yeast.

Authors:  Sunghyuk Lim; Thomas Strahl; Jeremy Thorner; James B Ames
Journal:  J Biol Chem       Date:  2011-02-02       Impact factor: 5.157

4.  X-ray structures of magnesium and manganese complexes with the N-terminal domain of calmodulin: insights into the mechanism and specificity of metal ion binding to an EF-hand.

Authors:  F Timur Senguen; Zenon Grabarek
Journal:  Biochemistry       Date:  2012-07-27       Impact factor: 3.162

5.  Retinal guanylyl cyclase isozyme 1 is the preferential in vivo target for constitutively active GCAP1 mutants causing congenital degeneration of photoreceptors.

Authors:  Elena V Olshevskaya; Igor V Peshenko; Andrey B Savchenko; Alexander M Dizhoor
Journal:  J Neurosci       Date:  2012-05-23       Impact factor: 6.167

6.  Structure of calmodulin refined at 2.2 A resolution.

Authors:  Y S Babu; C E Bugg; W J Cook
Journal:  J Mol Biol       Date:  1988-11-05       Impact factor: 5.469

7.  Calcium binding, but not a calcium-myristoyl switch, controls the ability of guanylyl cyclase-activating protein GCAP-2 to regulate photoreceptor guanylyl cyclase.

Authors:  E V Olshevskaya; R E Hughes; J B Hurley; A M Dizhoor
Journal:  J Biol Chem       Date:  1997-05-30       Impact factor: 5.157

8.  Activation of retinal guanylyl cyclase-1 by Ca2+-binding proteins involves its dimerization.

Authors:  H Yu; E Olshevskaya; T Duda; K Seno; F Hayashi; R K Sharma; A M Dizhoor; A Yamazaki
Journal:  J Biol Chem       Date:  1999-05-28       Impact factor: 5.157

9.  Conformational dynamics of recoverin's Ca2+-myristoyl switch probed by 15N NMR relaxation dispersion and chemical shift analysis.

Authors:  Xianzhong Xu; Rieko Ishima; James B Ames
Journal:  Proteins       Date:  2011-04-04

10.  Activation of retinal guanylyl cyclase RetGC1 by GCAP1: stoichiometry of binding and effect of new LCA-related mutations.

Authors:  Igor V Peshenko; Elena V Olshevskaya; Suxia Yao; Hany H Ezzeldin; Steven J Pittler; Alexander M Dizhoor
Journal:  Biochemistry       Date:  2010-02-02       Impact factor: 3.162

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  13 in total

1.  Structural Characterization of Ferrous Ion Binding to Retinal Guanylate Cyclase Activator Protein 5 from Zebrafish Photoreceptors.

Authors:  Sunghyuk Lim; Alexander Scholten; Grace Manchala; Diana Cudia; Sarah-Karina Zlomke-Sell; Karl-W Koch; James B Ames
Journal:  Biochemistry       Date:  2017-12-07       Impact factor: 3.162

2.  NMR and EPR-DEER Structure of a Dimeric Guanylate Cyclase Activator Protein-5 from Zebrafish Photoreceptors.

Authors:  Diana Cudia; Graham P Roseman; Tufa E Assafa; Manisha Kumari Shahu; Alexander Scholten; Sarah-Karina Menke-Sell; Hiroaki Yamada; Karl-W Koch; Glenn Milhauser; James B Ames
Journal:  Biochemistry       Date:  2021-10-05       Impact factor: 3.162

3.  Allosteric communication pathways routed by Ca2+/Mg2+ exchange in GCAP1 selectively switch target regulation modes.

Authors:  Valerio Marino; Daniele Dell'Orco
Journal:  Sci Rep       Date:  2016-10-14       Impact factor: 4.379

4.  Structure and Calcium Binding Properties of a Neuronal Calcium-Myristoyl Switch Protein, Visinin-Like Protein 3.

Authors:  Congmin Li; Sunghyuk Lim; Karl H Braunewell; James B Ames
Journal:  PLoS One       Date:  2016-11-07       Impact factor: 3.240

5.  The Calcium-Dependent Switch Helix of L-Plastin Regulates Actin Bundling.

Authors:  Hiroaki Ishida; Katharine V Jensen; Andrew G Woodman; M Eric Hyndman; Hans J Vogel
Journal:  Sci Rep       Date:  2017-02-01       Impact factor: 4.379

6.  Retinal guanylyl cyclase activating protein 1 forms a functional dimer.

Authors:  Sunghyuk Lim; Graham Roseman; Igor Peshenko; Grace Manchala; Diana Cudia; Alexander M Dizhoor; Glenn Millhauser; James B Ames
Journal:  PLoS One       Date:  2018-03-07       Impact factor: 3.240

7.  Molecular determinants of Guanylate Cyclase Activating Protein subcellular distribution in photoreceptor cells of the retina.

Authors:  Santiago López-Begines; Anna Plana-Bonamaisó; Ana Méndez
Journal:  Sci Rep       Date:  2018-02-13       Impact factor: 4.379

Review 8.  Dimerization of Neuronal Calcium Sensor Proteins.

Authors:  James B Ames
Journal:  Front Mol Neurosci       Date:  2018-11-02       Impact factor: 5.639

9.  Modulation of Guanylate Cyclase Activating Protein 1 (GCAP1) Dimeric Assembly by Ca2+ or Mg2+: Hints to Understand Protein Activity.

Authors:  Francesco Bonì; Valerio Marino; Carlo Bidoia; Eloise Mastrangelo; Alberto Barbiroli; Daniele Dell'Orco; Mario Milani
Journal:  Biomolecules       Date:  2020-10-05

10.  Analysis of Arabidopsis TPK2 and KCO3 reveals structural properties required for K+ channel function.

Authors:  Chihiro Uehara; Kota Takeda; Tatsuki Ibuki; Tadaomi Furuta; Naomi Hoshi; Ellen Tanudjaja; Nobuyuki Uozumi
Journal:  Channels (Austin)       Date:  2020-12       Impact factor: 2.581

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