Literature DB >> 23906368

Double electron-electron resonance probes Ca²⁺-induced conformational changes and dimerization of recoverin.

William K Myers1, Xianzhong Xu, Congmin Li, Jens O Lagerstedt, Madhu S Budamagunta, John C Voss, R David Britt, James B Ames.   

Abstract

Recoverin, a member of the neuronal calcium sensor (NCS) branch of the calmodulin superfamily, is expressed in retinal photoreceptor cells and serves as a calcium sensor in vision. Ca²⁺-induced conformational changes in recoverin cause extrusion of its covalently attached myristate (termed Ca²⁺-myristoyl switch) that promotes translocation of recoverin to disk membranes during phototransduction in retinal rod cells. Here we report double electron-electron resonance (DEER) experiments on recoverin that probe Ca²⁺-induced changes in distance as measured by the dipolar coupling between spin-labels strategically positioned at engineered cysteine residues on the protein surface. The DEER distance between nitroxide spin-labels attached at C39 and N120C is 2.5 ± 0.1 nm for Ca²⁺-free recoverin and 3.7 ± 0.1 nm for Ca²⁺-bound recoverin. An additional DEER distance (5-6 nm) observed for Ca²⁺-bound recoverin may represent an intermolecular distance between C39 and N120. ¹⁵N NMR relaxation analysis and CW-EPR experiments both confirm that Ca²⁺-bound recoverin forms a dimer at protein concentrations above 100 μM, whereas Ca²⁺-free recoverin is monomeric. We propose that Ca²⁺-induced dimerization of recoverin at the disk membrane surface may play a role in regulating Ca²⁺-dependent phosphorylation of dimeric rhodopsin. The DEER approach will be useful for elucidating dimeric structures of NCS proteins in general for which Ca²⁺-induced dimerization is functionally important but not well understood.

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Year:  2013        PMID: 23906368      PMCID: PMC3784611          DOI: 10.1021/bi400538w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

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Authors:  K J Oh; C Altenbach; R J Collier; W L Hubbell
Journal:  Methods Mol Biol       Date:  2000

2.  Dead-time free measurement of dipole-dipole interactions between electron spins.

Authors:  M Pannier; S Veit; A Godt; G Jeschke; H W Spiess
Journal:  J Magn Reson       Date:  2000-02       Impact factor: 2.229

3.  Immunocytochemical localization and crystal structure of human frequenin (neuronal calcium sensor 1).

Authors:  Y Bourne; J Dannenberg; V Pollmann; P Marchot; O Pongs
Journal:  J Biol Chem       Date:  2000-11-22       Impact factor: 5.157

4.  Atomic-force microscopy: Rhodopsin dimers in native disc membranes.

Authors:  Dimitrios Fotiadis; Yan Liang; Slawomir Filipek; David A Saperstein; Andreas Engel; Krzysztof Palczewski
Journal:  Nature       Date:  2003-01-09       Impact factor: 49.962

Review 5.  Neuronal Ca2+-sensor proteins: multitalented regulators of neuronal function.

Authors:  Robert D Burgoyne; Dermott W O'Callaghan; Burcu Hasdemir; Lee P Haynes; Alexei V Tepikin
Journal:  Trends Neurosci       Date:  2004-04       Impact factor: 13.837

6.  Topology of the amphipathic helices of the colicin A pore-forming domain in E. coli lipid membranes studied by pulse EPR.

Authors:  Sabine Böhme; Pulagam V L Padmavathi; Julia Holterhues; Fatiha Ouchni; Johann P Klare; Heinz-Jürgen Steinhoff
Journal:  Phys Chem Chem Phys       Date:  2009-07-07       Impact factor: 3.676

7.  Structure and calcium-binding studies of a recoverin mutant (E85Q) in an allosteric intermediate state.

Authors:  James B Ames; Nobuko Hamasaki; Tatiana Molchanova
Journal:  Biochemistry       Date:  2002-05-07       Impact factor: 3.162

8.  Rapid structural fluctuations of the free HIV protease flaps in solution: relationship to crystal structures and comparison with predictions of dynamics calculations.

Authors:  Darón I Freedberg; Rieko Ishima; Jaison Jacob; Yun-Xing Wang; Irina Kustanovich; John M Louis; Dennis A Torchia
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

9.  Recoverin regulates light-dependent phosphodiesterase activity in retinal rods.

Authors:  Clint L Makino; R L Dodd; J Chen; M E Burns; A Roca; M I Simon; D A Baylor
Journal:  J Gen Physiol       Date:  2004-06       Impact factor: 4.086

10.  Structure, topology, and dynamics of myristoylated recoverin bound to phospholipid bilayers.

Authors:  Kathleen G Valentine; Michael F Mesleh; Stanley J Opella; Mitsuhiko Ikura; James B Ames
Journal:  Biochemistry       Date:  2003-06-03       Impact factor: 3.162

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  6 in total

1.  Calcium-dependent membrane association of a flagellar calcium sensor does not require calcium binding.

Authors:  Danijela Maric; Cheryl L Olson; Xianzhong Xu; James B Ames; David M Engman
Journal:  Mol Biochem Parasitol       Date:  2015-06-19       Impact factor: 1.759

2.  Retinal guanylyl cyclase activating protein 1 forms a functional dimer.

Authors:  Sunghyuk Lim; Graham Roseman; Igor Peshenko; Grace Manchala; Diana Cudia; Alexander M Dizhoor; Glenn Millhauser; James B Ames
Journal:  PLoS One       Date:  2018-03-07       Impact factor: 3.240

3.  Oligomeric state, hydrodynamic properties and target recognition of human Calcium and Integrin Binding protein 2 (CIB2).

Authors:  Giuditta Dal Cortivo; Valerio Marino; Claudio Iacobucci; Rosario Vallone; Christian Arlt; Anne Rehkamp; Andrea Sinz; Daniele Dell'Orco
Journal:  Sci Rep       Date:  2019-10-21       Impact factor: 4.379

4.  Disulfide Dimerization of Neuronal Calcium Sensor-1: Implications for Zinc and Redox Signaling.

Authors:  Viktoriia E Baksheeva; Alexey V Baldin; Arthur O Zalevsky; Aliya A Nazipova; Alexey S Kazakov; Vasiliy I Vladimirov; Neonila V Gorokhovets; François Devred; Pavel P Philippov; Alexandr V Bazhin; Andrey V Golovin; Andrey A Zamyatnin; Dmitry V Zinchenko; Philipp O Tsvetkov; Sergei E Permyakov; Evgeni Yu Zernii
Journal:  Int J Mol Sci       Date:  2021-11-22       Impact factor: 5.923

5.  Optimized reverse micelle surfactant system for high-resolution NMR spectroscopy of encapsulated proteins and nucleic acids dissolved in low viscosity fluids.

Authors:  Igor Dodevski; Nathaniel V Nucci; Kathleen G Valentine; Gurnimrat K Sidhu; Evan S O'Brien; Arthur Pardi; A Joshua Wand
Journal:  J Am Chem Soc       Date:  2014-02-19       Impact factor: 15.419

Review 6.  Dimerization of Neuronal Calcium Sensor Proteins.

Authors:  James B Ames
Journal:  Front Mol Neurosci       Date:  2018-11-02       Impact factor: 5.639

  6 in total

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