Literature DB >> 21458338

Solution NMR spectroscopy of supra-molecular systems, why bother? A methyl-TROSY view.

Lewis E Kay1.   

Abstract

With the development of appropriate labeling schemes and the associated experiments that exploit them it has become possible to record high quality solution NMR spectra of supra-molecular complexes with molecular masses extending to 1MDa. One such approach involves selective (13)CH(3) methyl labeling in highly deuterated proteins using experiments that make use of a methyl-TROSY effect that significantly improves both resolution and sensitivity in spectra. The utility of this methodology has been demonstrated on a growing number of interesting particles. It seems appropriate at this juncture, therefore, to 'step back' and evaluate the role that solution NMR spectroscopy can play in what has traditionally been the domain of X-ray crystallography and more recently cryo-electron microscopy. It is argued here that solution NMR can make a critical contribution to our understanding of how dynamics regulate function in these high molecular weight systems. Several examples from work in my laboratory on the proteasome are presented as an illustration.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21458338     DOI: 10.1016/j.jmr.2011.03.008

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  29 in total

1.  Estimating side-chain order in methyl-protonated, perdeuterated proteins via multiple-quantum relaxation violated coherence transfer NMR spectroscopy.

Authors:  Hechao Sun; Raquel Godoy-Ruiz; Vitali Tugarinov
Journal:  J Biomol NMR       Date:  2012-03       Impact factor: 2.835

Review 2.  Sensitivity enhancement in solution NMR: emerging ideas and new frontiers.

Authors:  Jung Ho Lee; Yusuke Okuno; Silvia Cavagnero
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

3.  Flexibility of the C-terminal, or CII, ring of KaiC governs the rhythm of the circadian clock of cyanobacteria.

Authors:  Yong-Gang Chang; Nai-Wei Kuo; Roger Tseng; Andy LiWang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-25       Impact factor: 11.205

4.  Rhythmic ring-ring stacking drives the circadian oscillator clockwise.

Authors:  Yong-Gang Chang; Roger Tseng; Nai-Wei Kuo; Andy LiWang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-11       Impact factor: 11.205

5.  Utilization of lysine ¹³C-methylation NMR for protein-protein interaction studies.

Authors:  Yoshikazu Hattori; Kyoko Furuita; Izuru Ohki; Takahisa Ikegami; Harumi Fukada; Masahiro Shirakawa; Toshimichi Fujiwara; Chojiro Kojima
Journal:  J Biomol NMR       Date:  2012-12-06       Impact factor: 2.835

6.  PARAssign--paramagnetic NMR assignments of protein nuclei on the basis of pseudocontact shifts.

Authors:  Simon P Skinner; Mois Moshev; Mathias A S Hass; Peter H J Keizers; Marcellus Ubbink
Journal:  J Biomol NMR       Date:  2013-03-23       Impact factor: 2.835

Review 7.  Nuclear magnetic resonance spectroscopy of the circadian clock of cyanobacteria.

Authors:  Yong-Gang Chang; Roger Tseng; Nai-Wei Kuo; Andy LiWang
Journal:  Integr Comp Biol       Date:  2013-05-10       Impact factor: 3.326

8.  Probing exchange kinetics and atomic resolution dynamics in high-molecular-weight complexes using dark-state exchange saturation transfer NMR spectroscopy.

Authors:  Nicolas L Fawzi; Jinfa Ying; Dennis A Torchia; G Marius Clore
Journal:  Nat Protoc       Date:  2012-07-19       Impact factor: 13.491

9.  Enzyme mechanisms: Flexibility leads to function.

Authors:  Jianhua Zhao; John L Rubinstein
Journal:  Nat Chem       Date:  2014-03       Impact factor: 24.427

Review 10.  Dynamical Structures of Hsp70 and Hsp70-Hsp40 Complexes.

Authors:  Thomas Reid Alderson; Jin Hae Kim; John Lute Markley
Journal:  Structure       Date:  2016-06-23       Impact factor: 5.006

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