Literature DB >> 21454614

DiGeorge critical region 8 (DGCR8) is a double-cysteine-ligated heme protein.

Ian Barr1, Aaron T Smith, Rachel Senturia, Yanqiu Chen, Brooke D Scheidemantle, Judith N Burstyn, Feng Guo.   

Abstract

All known heme-thiolate proteins ligate the heme iron using one cysteine side chain. We previously found that DiGeorge Critical Region 8 (DGCR8), an essential microRNA processing factor, associates with heme of unknown redox state when overexpressed in Escherichia coli. On the basis of the similarity of the 450-nm Soret absorption peak of the DGCR8-heme complex to that of cytochrome P450 containing ferrous heme with CO bound, we identified cysteine 352 as a probable axial ligand in DGCR8. Here we further characterize the DGCR8-heme interaction using biochemical and spectroscopic methods. The DGCR8-heme complex is highly stable, with a half-life exceeding 4 days. Mutation of the conserved proline 351 to an alanine increases the rate of heme dissociation and allows the DGCR8-heme complex to be reconstituted biochemically. Surprisingly, DGCR8 binds ferric heme without CO to generate a hyperporphyrin spectrum. The electronic absorption, magnetic circular dichroism, and electron paramagnetic resonance spectra of the DGCR8-heme complex suggest a ferric heme bearing two cysteine ligands. This model was further confirmed using selenomethionine-substituted DGCR8 and mercury titration. DGCR8 is the first example of a heme-binding protein with two endogenous cysteine side chains serving as axial ligands. We further show that native DGCR8 binds heme when expressed in eukaryotic cells. This study provides a chemical basis for understanding the function of the DGCR8-heme interaction in microRNA maturation.

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Year:  2011        PMID: 21454614      PMCID: PMC3089513          DOI: 10.1074/jbc.M110.180844

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  38 in total

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Journal:  J Biol Chem       Date:  1974-01-10       Impact factor: 5.157

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Authors:  Nirupama Gupta; Stephen W Ragsdale
Journal:  J Biol Chem       Date:  2010-12-01       Impact factor: 5.157

Review 6.  Structure-function relationships in heme-proteins.

Authors:  Massimo Paoli; Jon Marles-Wright; Ann Smith
Journal:  DNA Cell Biol       Date:  2002-04       Impact factor: 3.311

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8.  The nuclear RNase III Drosha initiates microRNA processing.

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Journal:  J Biol Chem       Date:  1982-07-25       Impact factor: 5.157

10.  The generation of a hyperporphyrin spectrum upon thiol binding to ferric chloroperoxidase. Further evidence of endogenous thiolate ligation to the ferric enzyme.

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Journal:  J Biol Chem       Date:  1984-11-10       Impact factor: 5.157

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  28 in total

1.  Ferric, not ferrous, heme activates RNA-binding protein DGCR8 for primary microRNA processing.

Authors:  Ian Barr; Aaron T Smith; Yanqiu Chen; Rachel Senturia; Judith N Burstyn; Feng Guo
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-23       Impact factor: 11.205

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3.  Caspases cleave and inhibit the microRNA processing protein DiGeorge Critical Region 8.

Authors:  Ming Gong; Yanqiu Chen; Rachel Senturia; Matthew Ulgherait; Michael Faller; Feng Guo
Journal:  Protein Sci       Date:  2012-04-23       Impact factor: 6.725

4.  Processing of microRNA primary transcripts requires heme in mammalian cells.

Authors:  Sara H Weitz; Ming Gong; Ian Barr; Shimon Weiss; Feng Guo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-21       Impact factor: 11.205

5.  Deformability in the cleavage site of primary microRNA is not sensed by the double-stranded RNA binding domains in the microprocessor component DGCR8.

Authors:  Kaycee A Quarles; Durga Chadalavada; Scott A Showalter
Journal:  Proteins       Date:  2015-04-28

6.  Unusual spectroscopic and ligand binding properties of the cytochrome P450-flavodoxin fusion enzyme XplA.

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Journal:  J Biol Chem       Date:  2012-04-12       Impact factor: 5.157

7.  Cobalt(III) Protoporphyrin Activates the DGCR8 Protein and Can Compensate microRNA Processing Deficiency.

Authors:  Ian Barr; Sara H Weitz; Talia Atkin; PeiKen Hsu; Maria Karayiorgou; Joseph A Gogos; Shimon Weiss; Feng Guo
Journal:  Chem Biol       Date:  2015-06-18

8.  The core microprocessor component DiGeorge syndrome critical region 8 (DGCR8) is a nonspecific RNA-binding protein.

Authors:  Braden M Roth; Daniella Ishimaru; Mirko Hennig
Journal:  J Biol Chem       Date:  2013-07-26       Impact factor: 5.157

Review 9.  Redox Regulation of Heme Oxygenase-2 and the Transcription Factor, Rev-Erb, Through Heme Regulatory Motifs.

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10.  The DGCR8 RNA-binding heme domain recognizes primary microRNAs by clamping the hairpin.

Authors:  Jen Quick-Cleveland; Jose P Jacob; Sara H Weitz; Grant Shoffner; Rachel Senturia; Feng Guo
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