Literature DB >> 21439472

Lipidomics at the interface of structure and function in systems biology.

Richard W Gross1, Xianlin Han.   

Abstract

Cells, tissues, and biological fluids contain a diverse repertoire of many tens of thousands of structurally distinct lipids that play multiple roles in cellular signaling, bioenergetics, and membrane structure and function. In an era where lipid-related disease states predominate, lipidomics has assumed a prominent role in systems biology through its unique ability to directly identify functional alterations in multiple lipid metabolic and signaling networks. The development of shotgun lipidomics has led to the facile accrual of high density information on alterations in the lipidome mediating physiologic cellular adaptation during health and pathologic alterations during disease. Through both targeted and nontargeted investigations, lipidomics has already revealed the chemical mechanisms underlying many lipid-related disease states.
Copyright © 2011 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21439472      PMCID: PMC3132894          DOI: 10.1016/j.chembiol.2011.01.014

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  60 in total

1.  Endocannabinoid biosynthesis proceeding through glycerophospho-N-acyl ethanolamine and a role for alpha/beta-hydrolase 4 in this pathway.

Authors:  Gabriel M Simon; Benjamin F Cravatt
Journal:  J Biol Chem       Date:  2006-07-03       Impact factor: 5.157

Review 2.  Cellular lipidomics.

Authors:  Gerrit van Meer
Journal:  EMBO J       Date:  2005-09-01       Impact factor: 11.598

Review 3.  Lipotoxic diseases.

Authors:  Roger H Unger
Journal:  Annu Rev Med       Date:  2002       Impact factor: 13.739

Review 4.  International Union of Pharmacology. LXI. Peroxisome proliferator-activated receptors.

Authors:  Liliane Michalik; Johan Auwerx; Joel P Berger; V Krishna Chatterjee; Christopher K Glass; Frank J Gonzalez; Paul A Grimaldi; Takashi Kadowaki; Mitchell A Lazar; Stephen O'Rahilly; Colin N A Palmer; Jorge Plutzky; Janardan K Reddy; Bruce M Spiegelman; Bart Staels; Walter Wahli
Journal:  Pharmacol Rev       Date:  2006-12       Impact factor: 25.468

5.  Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry.

Authors:  Christer S Ejsing; Julio L Sampaio; Vineeth Surendranath; Eva Duchoslav; Kim Ekroos; Robin W Klemm; Kai Simons; Andrej Shevchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-27       Impact factor: 11.205

6.  Metabolic oxidation regulates embryonic stem cell differentiation.

Authors:  Oscar Yanes; Julie Clark; Diana M Wong; Gary J Patti; Antonio Sánchez-Ruiz; H Paul Benton; Sunia A Trauger; Caroline Desponts; Sheng Ding; Gary Siuzdak
Journal:  Nat Chem Biol       Date:  2010-05-02       Impact factor: 15.040

7.  Elevation of sulfatides in ovarian cancer: an integrated transcriptomic and lipidomic analysis including tissue-imaging mass spectrometry.

Authors:  Ying Liu; Yanfeng Chen; Amin Momin; Rebecca Shaner; Elaine Wang; Nathan J Bowen; Lilya V Matyunina; L Deette Walker; John F McDonald; M Cameron Sullards; Alfred H Merrill
Journal:  Mol Cancer       Date:  2010-07-12       Impact factor: 27.401

Review 8.  The effect of obesity on health outcomes.

Authors:  John B Dixon
Journal:  Mol Cell Endocrinol       Date:  2009-07-21       Impact factor: 4.102

9.  Alterations in myocardial cardiolipin content and composition occur at the very earliest stages of diabetes: a shotgun lipidomics study.

Authors:  Xianlin Han; Jingyue Yang; Kui Yang; Zhongdan Zhao; Dana R Abendschein; Richard W Gross
Journal:  Biochemistry       Date:  2007-05-08       Impact factor: 3.162

10.  High plasmalogen and arachidonic acid content of canine myocardial sarcolemma: a fast atom bombardment mass spectroscopic and gas chromatography-mass spectroscopic characterization.

Authors:  R W Gross
Journal:  Biochemistry       Date:  1984-01-03       Impact factor: 3.162

View more
  61 in total

Review 1.  The electrophile responsive proteome: integrating proteomics and lipidomics with cellular function.

Authors:  Ashlee N Higdon; Aimee Landar; Stephen Barnes; Victor M Darley-Usmar
Journal:  Antioxid Redox Signal       Date:  2012-04-18       Impact factor: 8.401

2.  Analytical challenges of shotgun lipidomics at different resolution of measurements.

Authors:  Jianing Wang; Xianlin Han
Journal:  Trends Analyt Chem       Date:  2019-10-17       Impact factor: 12.296

3.  Lipid Profiling of In Vitro Cell Models of Adipogenic Differentiation: Relationships With Mouse Adipose Tissues.

Authors:  Lucy Liaw; Igor Prudovsky; Robert A Koza; Rea V Anunciado-Koza; Matthew E Siviski; Volkhard Lindner; Robert E Friesel; Clifford J Rosen; Paul R S Baker; Brigitte Simons; Calvin P H Vary
Journal:  J Cell Biochem       Date:  2016-03-16       Impact factor: 4.429

Review 4.  Multi-dimensional mass spectrometry-based shotgun lipidomics and novel strategies for lipidomic analyses.

Authors:  Xianlin Han; Kui Yang; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2011-07-13       Impact factor: 10.946

Review 5.  Bioinformatics and systems biology of the lipidome.

Authors:  Shankar Subramaniam; Eoin Fahy; Shakti Gupta; Manish Sud; Robert W Byrnes; Dawn Cotter; Ashok Reddy Dinasarapu; Mano Ram Maurya
Journal:  Chem Rev       Date:  2011-09-23       Impact factor: 60.622

6.  The hereditary spastic paraplegia-related enzyme DDHD2 is a principal brain triglyceride lipase.

Authors:  Jordon M Inloes; Ku-Lung Hsu; Melissa M Dix; Andreu Viader; Kim Masuda; Thais Takei; Malcolm R Wood; Benjamin F Cravatt
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

7.  Comparing phospholipid profiles of mitochondria and whole tissue: Higher PUFA content in mitochondria is driven by increased phosphatidylcholine unsaturation.

Authors:  Cyrus E Kuschner; Jaewoo Choi; Tai Yin; Koichiro Shinozaki; Lance B Becker; Joshua W Lampe; Junhwan Kim
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2018-07-10       Impact factor: 3.205

8.  Development of an automated multi-injection shotgun lipidomics approach using a triple quadrupole mass spectrometer.

Authors:  John A Bowden; Jackie T Bangma; John R Kucklick
Journal:  Lipids       Date:  2014-04-12       Impact factor: 1.880

9.  Optimization of Electrospray Ionization Source Parameters for Lipidomics To Reduce Misannotation of In-Source Fragments as Precursor Ions.

Authors:  Rose M Gathungu; Pablo Larrea; Matthew J Sniatynski; Vasant R Marur; John A Bowden; Jeremy P Koelmel; Pamela Starke-Reed; Van S Hubbard; Bruce S Kristal
Journal:  Anal Chem       Date:  2018-11-02       Impact factor: 6.986

10.  Cholesterol efflux analyses using stable isotopes and mass spectrometry.

Authors:  Robert J Brown; Fei Shao; Angel Baldán; Carolyn J Albert; David A Ford
Journal:  Anal Biochem       Date:  2012-10-13       Impact factor: 3.365

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.