Literature DB >> 21429266

Caenorhabditis elegans as a platform for molecular quantitative genetics and the systems biology of natural variation.

Bryn E Gaertner1, Patrick C Phillips.   

Abstract

Over the past 30 years, the characteristics that have made the nematode Caenorhabditis elegans one of the premier animal model systems have also allowed it to emerge as a powerful model system for determining the genetic basis of quantitative traits, particularly for the identification of naturally segregating and/or lab-adapted alleles with large phenotypic effects. To better understand the genetic underpinnings of natural variation in other complex phenotypes, C. elegans is uniquely poised in the emerging field of quantitative systems biology because of the extensive knowledge of cellular and neural bases to such traits. However, perturbations in standing genetic variation and patterns of linkage disequilibrium among loci are likely to limit our ability to tie understanding of molecular function to a broader evolutionary context. Coupling the experimental strengths of the C. elegans system with the ecological advantages of closely related nematodes should provide a powerful means of understanding both the molecular and evolutionary genetics of quantitative traits.

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Year:  2010        PMID: 21429266     DOI: 10.1017/S0016672310000601

Source DB:  PubMed          Journal:  Genet Res (Camb)        ISSN: 0016-6723            Impact factor:   1.588


  29 in total

1.  Self-fertilization sweeps up variation in the worm genome.

Authors:  Patrick C Phillips
Journal:  Nat Genet       Date:  2012-02-27       Impact factor: 38.330

2.  More than the sum of its parts: a complex epistatic network underlies natural variation in thermal preference behavior in Caenorhabditis elegans.

Authors:  Bryn E Gaertner; Michelle D Parmenter; Matthew V Rockman; Leonid Kruglyak; Patrick C Phillips
Journal:  Genetics       Date:  2012-10-19       Impact factor: 4.562

3.  Cultivation of Caenorhabditis elegans in Three Dimensions in the Laboratory.

Authors:  Tong Y Lee; Kyoung-Hye Yoon; Jin I Lee
Journal:  J Vis Exp       Date:  2016-12-12       Impact factor: 1.355

Review 4.  Developmental Plasticity and Cellular Reprogramming in Caenorhabditis elegans.

Authors:  Joel Rothman; Sophie Jarriault
Journal:  Genetics       Date:  2019-11       Impact factor: 4.562

Review 5.  The laboratory domestication of Caenorhabditis elegans.

Authors:  Mark G Sterken; L Basten Snoek; Jan E Kammenga; Erik C Andersen
Journal:  Trends Genet       Date:  2015-03-21       Impact factor: 11.639

6.  Rapid Isolation of Wild Nematodes by Baermann Funnel.

Authors:  Sophia C Tintori; Solomon A Sloat; Matthew V Rockman
Journal:  J Vis Exp       Date:  2022-01-31       Impact factor: 1.355

7.  WormQTL2: an interactive platform for systems genetics in Caenorhabditis elegans.

Authors:  Basten L Snoek; Mark G Sterken; Margi Hartanto; Albert-Jan van Zuilichem; Jan E Kammenga; Dick de Ridder; Harm Nijveen
Journal:  Database (Oxford)       Date:  2020-01-01       Impact factor: 3.451

8.  Population dynamics and habitat sharing of natural populations of Caenorhabditis elegans and C. briggsae.

Authors:  Marie-Anne Félix; Fabien Duveau
Journal:  BMC Biol       Date:  2012-06-25       Impact factor: 7.431

9.  Natural variation for lifespan and stress response in the nematode Caenorhabditis remanei.

Authors:  Rose M Reynolds; Patrick C Phillips
Journal:  PLoS One       Date:  2013-04-26       Impact factor: 3.240

Review 10.  From QTL to gene: C. elegans facilitates discoveries of the genetic mechanisms underlying natural variation.

Authors:  Kathryn S Evans; Marijke H van Wijk; Patrick T McGrath; Erik C Andersen; Mark G Sterken
Journal:  Trends Genet       Date:  2021-07-03       Impact factor: 11.639

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