Literature DB >> 21417405

Promiscuous binding at the crossroads of numerous cancer pathways: insight from the binding of glutaminase interacting protein with glutaminase L.

David L Zoetewey1, Mohiuddin Ovee, Monimoy Banerjee, Rajagopalan Bhaskaran, Smita Mohanty.   

Abstract

The glutaminase interacting protein (GIP) is composed of a single PDZ domain that interacts with a growing list of partner proteins, including glutaminase L, that are involved in a number of cell signaling and cancer pathways. Therefore, GIP makes a good target for structure-based drug design. Here, we report the solution structures of both free GIP and GIP bound to the C-terminal peptide analogue of glutaminase L. This is the first reported nuclear magnetic resonance structure of GIP in a complex with one of its binding partners. Our analysis of both free GIP and GIP in a complex with the glutaminase L peptide provides important insights into how a promiscuous binding domain can have affinity for multiple binding partners. Through a detailed chemical shift perturbation analysis and backbone dynamics studies, we demonstrate here that the binding of the glutaminase L peptide to GIP is an allosteric event. Taken together, the insights reported here lay the groundwork for the future development of a specific inhibitor for GIP.

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Year:  2011        PMID: 21417405      PMCID: PMC3082602          DOI: 10.1021/bi102055y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  47 in total

1.  Basolateral membrane expression of a K+ channel, Kir 2.3, is directed by a cytoplasmic COOH-terminal domain.

Authors:  S Le Maout; P A Welling; M Brejon; O Olsen; J Merot
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-14       Impact factor: 11.205

2.  Using NMRView to visualize and analyze the NMR spectra of macromolecules.

Authors:  Bruce A Johnson
Journal:  Methods Mol Biol       Date:  2004

3.  Automated NMR structure calculation with CYANA.

Authors:  Peter Güntert
Journal:  Methods Mol Biol       Date:  2004

4.  Quantification of PDZ domain specificity, prediction of ligand affinity and rational design of super-binding peptides.

Authors:  Urs Wiedemann; Prisca Boisguerin; Rainer Leben; Dietmar Leitner; Gerd Krause; Karin Moelling; Rudolf Volkmer-Engert; Hartmut Oschkinat
Journal:  J Mol Biol       Date:  2004-10-22       Impact factor: 5.469

5.  TIP-1 has PDZ scaffold antagonist activity.

Authors:  Christine Alewine; Olav Olsen; James B Wade; Paul A Welling
Journal:  Mol Biol Cell       Date:  2006-07-19       Impact factor: 4.138

6.  Protein backbone angle restraints from searching a database for chemical shift and sequence homology.

Authors:  G Cornilescu; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  1999-03       Impact factor: 2.835

7.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

Review 8.  ZO-1, DlgA and PSD-95/SAP90: homologous proteins in tight, septate and synaptic cell junctions.

Authors:  D F Woods; P J Bryant
Journal:  Mech Dev       Date:  1993-12       Impact factor: 1.882

9.  Identification of two human glutaminase loci and tissue-specific expression of the two related genes.

Authors:  J C Aledo; P M Gómez-Fabre; L Olalla; J Márquez
Journal:  Mamm Genome       Date:  2000-12       Impact factor: 2.957

Review 10.  Catching a GEF by its tail.

Authors:  Rafael García-Mata; Keith Burridge
Journal:  Trends Cell Biol       Date:  2006-11-28       Impact factor: 20.808

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  4 in total

1.  Specificity and promiscuity in human glutaminase interacting protein recognition: insight from the binding of the internal and C-terminal motif.

Authors:  Monimoy Banerjee; David L Zoetewey; Mohiuddin Ovee; Suman Mazumder; Valery A Petrenko; Tatiana I Samoylova; Smita Mohanty
Journal:  Biochemistry       Date:  2012-08-21       Impact factor: 3.162

2.  Identification of brain-specific angiogenesis inhibitor 2 as an interaction partner of glutaminase interacting protein.

Authors:  Sevil Zencir; Mohiuddin Ovee; Melanie J Dobson; Monimoy Banerjee; Zeki Topcu; Smita Mohanty
Journal:  Biochem Biophys Res Commun       Date:  2011-07-20       Impact factor: 3.575

3.  New partner proteins containing novel internal recognition motif for human glutaminase interacting protein (hGIP).

Authors:  Sevil Zencir; Monimoy Banerjee; Melanie J Dobson; Ferhan Ayaydin; Elfrieda Ayaydin Fodor; Zeki Topcu; Smita Mohanty
Journal:  Biochem Biophys Res Commun       Date:  2013-02-05       Impact factor: 3.575

Review 4.  PDZ Domain Recognition: Insight from Human Tax-Interacting Protein 1 (TIP-1) Interaction with Target Proteins.

Authors:  Smita Mohanty; Mohiuddin Ovee; Monimoy Banerjee
Journal:  Biology (Basel)       Date:  2015-02-05
  4 in total

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