Literature DB >> 21409277

Extending the molecular size in accurate quantum-chemical calculations: the equilibrium structure and spectroscopic properties of uracil.

Cristina Puzzarini1, Vincenzo Barone.   

Abstract

The equilibrium structure of uracil has been investigated using both theoretical and experimental data. With respect to the former, quantum-chemical calculations at the coupled-cluster level in conjunction with a triple-zeta basis set have been carried out. Extrapolation to the basis set limit, performed employing the second-order Møller-Plesset perturbation theory, and inclusion of core-correlation and diffuse-function corrections have also been considered. Based on the available rotational constants for various isotopic species together with corresponding computed vibrational corrections, the semi-experimental equilibrium structure of uracil has been determined for the first time. Theoretical and semi-experimental structures have been found in remarkably good agreement, thus pointing out the limitations of previous experimental determinations. Molecular and spectroscopic properties of uracil have then been studied by means of the composite computational approach introduced for the molecular structure evaluation. Among the results achieved, we mention the revision of the dipole moment. On the whole, it has been proved that the computational procedure presented is able to provide parameters with the proper accuracy to support experimental investigations of large molecules of biological interest.

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Year:  2011        PMID: 21409277     DOI: 10.1039/c0cp02636k

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  17 in total

1.  Assessment of Electron Propagator Methods for the Simulation of Vibrationally Resolved Valence and Core Photoionization Spectra.

Authors:  A Baiardi; L Paoloni; V Barone; V G Zakrzewski; J V Ortiz
Journal:  J Chem Theory Comput       Date:  2017-06-09       Impact factor: 6.006

2.  CC/DFT Route toward Accurate Structures and Spectroscopic Features for Observed and Elusive Conformers of Flexible Molecules: Pyruvic Acid as a Case Study.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Paola Cimino; Emanuele Penocchio; Cristina Puzzarini
Journal:  J Chem Theory Comput       Date:  2015-08-07       Impact factor: 6.006

3.  VMS-ROT: A New Module of the Virtual Multifrequency Spectrometer for Simulation, Interpretation, and Fitting of Rotational Spectra.

Authors:  Daniele Licari; Nicola Tasinato; Lorenzo Spada; Cristina Puzzarini; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2017-08-11       Impact factor: 6.006

4.  The Role of State-of-the-Art Quantum-Chemical Calculations in Astrochemistry: Formation Route and Spectroscopy of Ethanimine as a Paradigmatic Case.

Authors:  Carmen Baiano; Jacopo Lupi; Nicola Tasinato; Cristina Puzzarini; Vincenzo Barone
Journal:  Molecules       Date:  2020-06-22       Impact factor: 4.411

5.  Structural features of the carbon-sulfur chemical bond: a semi-experimental perspective.

Authors:  Emanuele Penocchio; Marco Mendolicchio; Nicola Tasinato; Vincenzo Barone
Journal:  Can J Chem       Date:  2016-07-28       Impact factor: 1.118

6.  Extension of the AMBER Force Field for Nitroxide Radicals and Combined QM/MM/PCM Approach to the Accurate Determination of EPR Parameters of DMPO-H in Solution.

Authors:  Laura Hermosilla; Giacomo Prampolini; Paloma Calle; José Manuel García de la Vega; Giuseppe Brancato; Vincenzo Barone
Journal:  J Chem Theory Comput       Date:  2013-07-15       Impact factor: 6.006

7.  An integrated experimental and quantum-chemical investigation on the vibrational spectra of chlorofluoromethane.

Authors:  Andrea Pietropolli Charmet; Paolo Stoppa; Nicola Tasinato; Santi Giorgianni; Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Chiara Cappelli; Ivan Carnimeo; Cristina Puzzarini
Journal:  J Chem Phys       Date:  2013-10-28       Impact factor: 3.488

8.  Accurate structure, thermodynamic and spectroscopic parameters from CC and CC/DFT schemes: the challenge of the conformational equilibrium in glycine.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Cristina Puzzarini
Journal:  Phys Chem Chem Phys       Date:  2013-04-19       Impact factor: 3.676

9.  Accurate structure, thermodynamics, and spectroscopy of medium-sized radicals by hybrid coupled cluster/density functional theory approaches: the case of phenyl radical.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Franco Egidi; Cristina Puzzarini
Journal:  J Chem Phys       Date:  2013-06-21       Impact factor: 3.488

10.  Accurate molecular structures and infrared spectra of trans-2,3-dideuterooxirane, methyloxirane, and trans-2,3-dimethyloxirane.

Authors:  Vincenzo Barone; Malgorzata Biczysko; Julien Bloino; Cristina Puzzarini
Journal:  J Chem Phys       Date:  2014-07-21       Impact factor: 3.488

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