Literature DB >> 21405870

Optimal receptor-cluster size determined by intrinsic and extrinsic noise.

Gerardo Aquino1, Diana Clausznitzer, Sylvain Tollis, Robert G Endres.   

Abstract

Biological cells sense external chemical stimuli in their environment using cell-surface receptors. To increase the sensitivity of sensing, receptors often cluster. This process occurs most noticeably in bacterial chemotaxis, a paradigm for sensing and signaling in general. While amplification of weak stimuli is useful in the absence of noise, its usefulness is less clear in the presence of extrinsic input noise and intrinsic signaling noise. Here, exemplified in a bacterial chemotaxis system, we combine the allosteric Monod-Wyman-Changeux model for signal amplification by receptor complexes with calculations of noise to study their interconnectedness. Importantly, we calculate the signal-to-noise ratio, describing the balance of beneficial and detrimental effects of clustering for the cell. Interestingly, we find that there is no advantage for the cell to build receptor complexes for noisy input stimuli in the absence of intrinsic signaling noise. However, with intrinsic noise, an optimal complex size arises in line with estimates of the size of chemoreceptor complexes in bacteria and protein aggregates in lipid rafts of eukaryotic cells.

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Year:  2011        PMID: 21405870     DOI: 10.1103/PhysRevE.83.021914

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

1.  Communication: Clusters of absorbing disks on a reflecting wall: competition for diffusing particles.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug; Vladimir A Lizunov; Joshua Zimmerberg; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2012-06-07       Impact factor: 3.488

2.  Spatial partitioning improves the reliability of biochemical signaling.

Authors:  Andrew Mugler; Filipe Tostevin; Pieter Rein ten Wolde
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-25       Impact factor: 11.205

3.  Trapping of diffusing particles by clusters of absorbing disks on a reflecting wall with disk centers on sites of a square lattice.

Authors:  Alexander M Berezhkovskii; Leonardo Dagdug; Marco-Vinicio Vazquez; Vladimir A Lizunov; Joshua Zimmerberg; Sergey M Bezrukov
Journal:  J Chem Phys       Date:  2013-02-14       Impact factor: 3.488

4.  Multiple sources of slow activity fluctuations in a bacterial chemosensory network.

Authors:  Remy Colin; Christelle Rosazza; Ady Vaknin; Victor Sourjik
Journal:  Elife       Date:  2017-12-12       Impact factor: 8.140

5.  Noise characteristics of the Escherichia coli rotary motor.

Authors:  Diana Clausznitzer; Robert G Endres
Journal:  BMC Syst Biol       Date:  2011-09-27

6.  Gβ Regulates Coupling between Actin Oscillators for Cell Polarity and Directional Migration.

Authors:  Oliver Hoeller; Jared E Toettcher; Huaqing Cai; Yaohui Sun; Chuan-Hsiang Huang; Mariel Freyre; Min Zhao; Peter N Devreotes; Orion D Weiner
Journal:  PLoS Biol       Date:  2016-02-18       Impact factor: 8.029

Review 7.  Multiple functions of flagellar motility and chemotaxis in bacterial physiology.

Authors:  Remy Colin; Bin Ni; Leanid Laganenka; Victor Sourjik
Journal:  FEMS Microbiol Rev       Date:  2021-11-23       Impact factor: 16.408

  7 in total

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