Literature DB >> 21383174

The circadian oscillator gene GIGANTEA mediates a long-term response of the Arabidopsis thaliana circadian clock to sucrose.

Neil Dalchau1, Seong J Baek, Helen M Briggs, Fiona C Robertson, Antony N Dodd, Michael J Gardner, Matthew A Stancombe, Michael J Haydon, Guy-Bart Stan, Jorge M Gonçalves, Alex A R Webb.   

Abstract

Circadian clocks are 24-h timing devices that phase cellular responses; coordinate growth, physiology, and metabolism; and anticipate the day-night cycle. Here we report sensitivity of the Arabidopsis thaliana circadian oscillator to sucrose, providing evidence that plant metabolism can regulate circadian function. We found that the Arabidopsis circadian system is particularly sensitive to sucrose in the dark. These data suggest that there is a feedback between the molecular components that comprise the circadian oscillator and plant metabolism, with the circadian clock both regulating and being regulated by metabolism. We used also simulations within a three-loop mathematical model of the Arabidopsis circadian oscillator to identify components of the circadian clock sensitive to sucrose. The mathematical studies identified GIGANTEA (GI) as being associated with sucrose sensing. Experimental validation of this prediction demonstrated that GI is required for the full response of the circadian clock to sucrose. We demonstrate that GI acts as part of the sucrose-signaling network and propose this role permits metabolic input into circadian timing in Arabidopsis.

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Year:  2011        PMID: 21383174      PMCID: PMC3064355          DOI: 10.1073/pnas.1015452108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

Review 2.  Circadian clocks in daily and seasonal control of development.

Authors:  Thomas F Schultz; Steve A Kay
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

Review 3.  How plants tell the time.

Authors:  Michael J Gardner; Katharine E Hubbard; Carlos T Hotta; Antony N Dodd; Alex A R Webb
Journal:  Biochem J       Date:  2006-07-01       Impact factor: 3.857

4.  The circadian clock in Arabidopsis roots is a simplified slave version of the clock in shoots.

Authors:  Allan B James; José A Monreal; Gillian A Nimmo; Ciarán L Kelly; Pawel Herzyk; Gareth I Jenkins; Hugh G Nimmo
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

Review 5.  Systems analyses of circadian networks.

Authors:  Katharine E Hubbard; Fiona C Robertson; Neil Dalchau; Alex A R Webb
Journal:  Mol Biosyst       Date:  2009-08-03

6.  Modelling genetic networks with noisy and varied experimental data: the circadian clock in Arabidopsis thaliana.

Authors:  J C W Locke; A J Millar; M S Turner
Journal:  J Theor Biol       Date:  2005-01-22       Impact factor: 2.691

7.  The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.

Authors:  Yasukazu Nakahata; Milota Kaluzova; Benedetto Grimaldi; Saurabh Sahar; Jun Hirayama; Danica Chen; Leonard P Guarente; Paolo Sassone-Corsi
Journal:  Cell       Date:  2008-07-25       Impact factor: 41.582

8.  Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1.

Authors:  Rodrigo A Gutiérrez; Trevor L Stokes; Karen Thum; Xiaodong Xu; Mariana Obertello; Manpreet S Katari; Milos Tanurdzic; Alexis Dean; Damion C Nero; C Robertson McClung; Gloria M Coruzzi
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-14       Impact factor: 11.205

9.  A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock.

Authors:  Jose L Pruneda-Paz; Ghislain Breton; Alessia Para; Steve A Kay
Journal:  Science       Date:  2009-03-13       Impact factor: 47.728

10.  Obesity and metabolic syndrome in circadian Clock mutant mice.

Authors:  Fred W Turek; Corinne Joshu; Akira Kohsaka; Emily Lin; Ganka Ivanova; Erin McDearmon; Aaron Laposky; Sue Losee-Olson; Amy Easton; Dalan R Jensen; Robert H Eckel; Joseph S Takahashi; Joseph Bass
Journal:  Science       Date:  2005-04-21       Impact factor: 47.728

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  99 in total

1.  Evening expression of arabidopsis GIGANTEA is controlled by combinatorial interactions among evolutionarily conserved regulatory motifs.

Authors:  Markus C Berns; Karl Nordström; Frédéric Cremer; Réka Tóth; Martin Hartke; Samson Simon; Jonas R Klasen; Ingmar Bürstel; George Coupland
Journal:  Plant Cell       Date:  2014-10-31       Impact factor: 11.277

2.  HSP90 functions in the circadian clock through stabilization of the client F-box protein ZEITLUPE.

Authors:  Tae-sung Kim; Woe Yeon Kim; Sumire Fujiwara; Jeongsik Kim; Joon-Yung Cha; Jin Ho Park; Sang Yeol Lee; David E Somers
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-26       Impact factor: 11.205

Review 3.  Integrating circadian dynamics with physiological processes in plants.

Authors:  Kathleen Greenham; C Robertson McClung
Journal:  Nat Rev Genet       Date:  2015-09-15       Impact factor: 53.242

Review 4.  Dancing in the dark: darkness as a signal in plants.

Authors:  Adam Seluzicki; Yogev Burko; Joanne Chory
Journal:  Plant Cell Environ       Date:  2017-02-23       Impact factor: 7.228

5.  A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light.

Authors:  Matthew Alan Jones; Wei Hu; Suzanne Litthauer; J Clark Lagarias; Stacey Lynn Harmer
Journal:  Plant Physiol       Date:  2015-07-08       Impact factor: 8.340

Review 6.  Circadian clock-regulated physiological outputs: dynamic responses in nature.

Authors:  Hannah A Kinmonth-Schultz; Greg S Golembeski; Takato Imaizumi
Journal:  Semin Cell Dev Biol       Date:  2013-02-20       Impact factor: 7.727

7.  Photoperiodic control of carbon distribution during the floral transition in Arabidopsis.

Authors:  M Isabel Ortiz-Marchena; Tomás Albi; Eva Lucas-Reina; Fatima E Said; Francisco J Romero-Campero; Beatriz Cano; M Teresa Ruiz; José M Romero; Federico Valverde
Journal:  Plant Cell       Date:  2014-02-21       Impact factor: 11.277

8.  Natural diversity in daily rhythms of gene expression contributes to phenotypic variation.

Authors:  Amaury de Montaigu; Antonis Giakountis; Matthew Rubin; Réka Tóth; Frédéric Cremer; Vladislava Sokolova; Aimone Porri; Matthieu Reymond; Cynthia Weinig; George Coupland
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-29       Impact factor: 11.205

9.  High-throughput sequencing of small RNAs revealed the diversified cold-responsive pathways during cold stress in the wild banana (Musa itinerans).

Authors:  Weihua Liu; Chunzhen Cheng; Fanglan Chen; Shanshan Ni; Yuling Lin; Zhongxiong Lai
Journal:  BMC Plant Biol       Date:  2018-11-29       Impact factor: 4.215

10.  Reciprocal interaction of the circadian clock with the iron homeostasis network in Arabidopsis.

Authors:  Sunghyun Hong; Sun A Kim; Mary Lou Guerinot; C Robertson McClung
Journal:  Plant Physiol       Date:  2012-12-18       Impact factor: 8.340

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