Literature DB >> 21368193

Reassessing optimal neural population codes with neurometric functions.

Philipp Berens1, Alexander S Ecker, Sebastian Gerwinn, Andreas S Tolias, Matthias Bethge.   

Abstract

Cortical circuits perform the computations underlying rapid perceptual decisions within a few dozen milliseconds with each neuron emitting only a few spikes. Under these conditions, the theoretical analysis of neural population codes is challenging, as the most commonly used theoretical tool--Fisher information--can lead to erroneous conclusions about the optimality of different coding schemes. Here we revisit the effect of tuning function width and correlation structure on neural population codes based on ideal observer analysis in both a discrimination and a reconstruction task. We show that the optimal tuning function width and the optimal correlation structure in both paradigms strongly depend on the available decoding time in a very similar way. In contrast, population codes optimized for Fisher information do not depend on decoding time and are severely suboptimal when only few spikes are available. In addition, we use the neurometric functions of the ideal observer in the classification task to investigate the differential coding properties of these Fisher-optimal codes for fine and coarse discrimination. We find that the discrimination error for these codes does not decrease to zero with increasing population size, even in simple coarse discrimination tasks. Our results suggest that quite different population codes may be optimal for rapid decoding in cortical computations than those inferred from the optimization of Fisher information.

Mesh:

Year:  2011        PMID: 21368193      PMCID: PMC3060259          DOI: 10.1073/pnas.1015904108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Optimal short-term population coding: when Fisher information fails.

Authors:  M Bethge; D Rotermund; K Pawelzik
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2.  Information in channel-coded systems: correlated receivers.

Authors:  H P Snippe; J J Koenderink
Journal:  Biol Cybern       Date:  1992       Impact factor: 2.086

3.  Optimal neuronal tuning for finite stimulus spaces.

Authors:  W Michael Brown; Alex Bäcker
Journal:  Neural Comput       Date:  2006-07       Impact factor: 2.026

4.  Optimal tuning widths in population coding of periodic variables.

Authors:  Marcelo A Montemurro; Stefano Panzeri
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5.  The effect of correlated variability on the accuracy of a population code.

Authors:  L F Abbott; P Dayan
Journal:  Neural Comput       Date:  1999-01-01       Impact factor: 2.026

6.  Speed of processing in the human visual system.

Authors:  S Thorpe; D Fize; C Marlot
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7.  A theory for the use of visual orientation information which exploits the columnar structure of striate cortex.

Authors:  M A Paradiso
Journal:  Biol Cybern       Date:  1988       Impact factor: 2.086

8.  Error-based analysis of optimal tuning functions explains phenomena observed in sensory neurons.

Authors:  Steve Yaeli; Ron Meir
Journal:  Front Comput Neurosci       Date:  2010-10-14       Impact factor: 2.380

9.  Spatial and temporal scales of neuronal correlation in primary visual cortex.

Authors:  Matthew A Smith; Adam Kohn
Journal:  J Neurosci       Date:  2008-11-26       Impact factor: 6.167

10.  Perceptual decision making in less than 30 milliseconds.

Authors:  Terrence R Stanford; Swetha Shankar; Dino P Massoglia; M Gabriela Costello; Emilio Salinas
Journal:  Nat Neurosci       Date:  2010-01-24       Impact factor: 24.884

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  25 in total

1.  The effect of noise correlations in populations of diversely tuned neurons.

Authors:  Alexander S Ecker; Philipp Berens; Andreas S Tolias; Matthias Bethge
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2.  Explaining the especially pink elephant.

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3.  Prior and prejudice.

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Journal:  Nat Neurosci       Date:  2011-07-26       Impact factor: 24.884

4.  Effect of the small-world structure on encoding performance in the primary visual cortex: an electrophysiological and modeling analysis.

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5.  Information-limiting correlations.

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6.  Optimal disparity estimation in natural stereo images.

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7.  Improved estimation and interpretation of correlations in neural circuits.

Authors:  Dimitri Yatsenko; Krešimir Josić; Alexander S Ecker; Emmanouil Froudarakis; R James Cotton; Andreas S Tolias
Journal:  PLoS Comput Biol       Date:  2015-03-31       Impact factor: 4.475

Review 8.  How mechanisms of perceptual decision-making affect the psychometric function.

Authors:  Joshua I Gold; Long Ding
Journal:  Prog Neurobiol       Date:  2012-05-17       Impact factor: 11.685

9.  Visual Decisions in the Presence of Measurement and Stimulus Correlations.

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10.  Noise in neural populations accounts for errors in working memory.

Authors:  Paul M Bays
Journal:  J Neurosci       Date:  2014-03-05       Impact factor: 6.167

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