Literature DB >> 21365675

Structure of the C-terminal domain of Saccharomyces cerevisiae Nup133, a component of the nuclear pore complex.

Parthasarathy Sampathkumar1, Tarun Gheyi, Stacy A Miller, Kevin T Bain, Mark Dickey, Jeffrey B Bonanno, Seung Joong Kim, Jeremy Phillips, Ursula Pieper, Javier Fernandez-Martinez, Josef D Franke, Anne Martel, Hiro Tsuruta, Shane Atwell, Devon A Thompson, J Spencer Emtage, Stephen R Wasserman, Michael P Rout, Andrej Sali, J Michael Sauder, Stephen K Burley.   

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Year:  2011        PMID： 21365675      PMCID： PMC3350809          DOI： 10.1002/prot.22973

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


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  29 in total

1.  Determination of domain structure of proteins from X-ray solution scattering.

Authors:  D I Svergun; M V Petoukhov; M H Koch
Journal:  Biophys J       Date:  2001-06       Impact factor: 4.033

2.  Substructure solution with SHELXD.

Authors:  Thomas R Schneider; George M Sheldrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-09-28

3.  The entire Nup107-160 complex, including three new members, is targeted as one entity to kinetochores in mitosis.

Authors:  Isabelle Loïodice; Annabelle Alves; Gwénaël Rabut; Megan Van Overbeek; Jan Ellenberg; Jean-Baptiste Sibarita; Valérie Doye
Journal:  Mol Biol Cell       Date:  2004-05-14       Impact factor: 4.138

Review 4.  Dynamic nuclear pore complexes: life on the edge.

Authors:  Elizabeth J Tran; Susan R Wente
Journal:  Cell       Date:  2006-06-16       Impact factor: 41.582

5.  Integration of small-angle X-ray scattering data into structural modeling of proteins and their assemblies.

Authors:  Friedrich Förster; Benjamin Webb; Kristin A Krukenberg; Hiro Tsuruta; David A Agard; Andrej Sali
Journal:  J Mol Biol       Date:  2008-07-31       Impact factor: 5.469

6.  Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex.

Authors:  Thomas Boehmer; Sandra Jeudy; Ian C Berke; Thomas U Schwartz
Journal:  Mol Cell       Date:  2008-06-20       Impact factor: 17.970

7.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

Authors:  W Kabsch; C Sander
Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

8.  FoXS: a web server for rapid computation and fitting of SAXS profiles.

Authors:  Dina Schneidman-Duhovny; Michal Hammel; Andrej Sali
Journal:  Nucleic Acids Res       Date:  2010-05-27       Impact factor: 16.971

Review 9.  Structure, dynamics and function of nuclear pore complexes.

Authors:  Maximiliano A D'Angelo; Martin W Hetzer
Journal:  Trends Cell Biol       Date:  2008-09-09       Impact factor: 20.808

10.  Disruption of the nucleoporin gene NUP133 results in clustering of nuclear pore complexes.

Authors:  L F Pemberton; M P Rout; G Blobel
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205
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  10 in total

Review 1.  The Structure of the Nuclear Pore Complex (An Update).

Authors:  Daniel H Lin; André Hoelz
Journal:  Annu Rev Biochem       Date:  2019-03-18       Impact factor: 23.643

2.  Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.

Authors:  Yi Shi; Javier Fernandez-Martinez; Elina Tjioe; Riccardo Pellarin; Seung Joong Kim; Rosemary Williams; Dina Schneidman-Duhovny; Andrej Sali; Michael P Rout; Brian T Chait
Journal:  Mol Cell Proteomics       Date:  2014-08-26       Impact factor: 5.911

3.  Integrative structure and functional anatomy of a nuclear pore complex.

Authors:  Seung Joong Kim; Javier Fernandez-Martinez; Ilona Nudelman; Yi Shi; Wenzhu Zhang; Barak Raveh; Thurston Herricks; Brian D Slaughter; Joanna A Hogan; Paula Upla; Ilan E Chemmama; Riccardo Pellarin; Ignacia Echeverria; Manjunatha Shivaraju; Azraa S Chaudhury; Junjie Wang; Rosemary Williams; Jay R Unruh; Charles H Greenberg; Erica Y Jacobs; Zhiheng Yu; M Jason de la Cruz; Roxana Mironska; David L Stokes; John D Aitchison; Martin F Jarrold; Jennifer L Gerton; Steven J Ludtke; Christopher W Akey; Brian T Chait; Andrej Sali; Michael P Rout
Journal:  Nature       Date:  2018-03-14       Impact factor: 49.962

4.  Integrative structure-function mapping of the nucleoporin Nup133 suggests a conserved mechanism for membrane anchoring of the nuclear pore complex.

Authors:  Seung Joong Kim; Javier Fernandez-Martinez; Parthasarathy Sampathkumar; Anne Martel; Tsutomu Matsui; Hiro Tsuruta; Thomas M Weiss; Yi Shi; Ane Markina-Inarrairaegui; Jeffery B Bonanno; J Michael Sauder; Stephen K Burley; Brian T Chait; Steven C Almo; Michael P Rout; Andrej Sali
Journal:  Mol Cell Proteomics       Date:  2014-08-19       Impact factor: 5.911

Review 5.  From integrative structural biology to cell biology.

Authors:  Andrej Sali
Journal:  J Biol Chem       Date:  2021-05-03       Impact factor: 5.157

Review 6.  Evolution: On a bender--BARs, ESCRTs, COPs, and finally getting your coat.

Authors:  Mark C Field; Andrej Sali; Michael P Rout
Journal:  J Cell Biol       Date:  2011-06-13       Impact factor: 10.539

7.  Structure-function mapping of a heptameric module in the nuclear pore complex.

Authors:  Javier Fernandez-Martinez; Jeremy Phillips; Matthew D Sekedat; Ruben Diaz-Avalos; Javier Velazquez-Muriel; Josef D Franke; Rosemary Williams; David L Stokes; Brian T Chait; Andrej Sali; Michael P Rout
Journal:  J Cell Biol       Date:  2012-02-13       Impact factor: 10.539

8.  Atomic structure of the Y complex of the nuclear pore.

Authors:  Kotaro Kelley; Kevin E Knockenhauer; Greg Kabachinski; Thomas U Schwartz
Journal:  Nat Struct Mol Biol       Date:  2015-03-30       Impact factor: 15.369

9.  Evolutionary divergence of the nuclear pore complex from fungi to metazoans.

Authors:  Kriti Chopra; Shrankhla Bawaria; Radha Chauhan
Journal:  Protein Sci       Date:  2018-12-24       Impact factor: 6.725

10.  Yeast Nup84-Nup133 complex structure details flexibility and reveals conservation of the membrane anchoring ALPS motif.

Authors:  Sarah A Nordeen; Daniel L Turman; Thomas U Schwartz
Journal:  Nat Commun       Date:  2020-11-27       Impact factor: 14.919
  10 in total

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