| Literature DB >> 21359222 |
Simone Lanini1, Silvia D'Arezzo, Vincenzo Puro, Lorena Martini, Francesco Imperi, Pierluca Piselli, Marco Montanaro, Simonetta Paoletti, Paolo Visca, Giuseppe Ippolito.
Abstract
BACKGROUND ANDEntities:
Mesh:
Substances:
Year: 2011 PMID: 21359222 PMCID: PMC3040201 DOI: 10.1371/journal.pone.0017064
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Time-line of the tasks.
| Task | Date | Type of activity |
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| Jun 7 to 21 |
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| Jun 7 to 21 |
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| Jun 7 to Oct 4 |
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| Jun 13 to Jul 19 |
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| Jun 27 |
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| Jul 2 to 31 |
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For each of the task the time and type of activity have been specified.
Figure 1Hematology unit.
(A) Map of the unit. Areas for outpatients and inpatients are in yellow and blue, respectively. Crosses indicate the location of patients with at least one P. aeruginosa isolate according to the case definitions (red, incident case; green, prevalent case; see text for details). L1 to L4 indicate the sites from which Pseudomonas spp. were isolated: L1, soap dispenser; L2 soap dispenser; L3 and L4 water outlets. (B) Drugs deposit and preparation room where the contaminated soap dispenser (L2) was placed.
Characteristics of patients included in the study.
| Retrospective cohort | Prospective surveillance | |
| Time period | 15 March 2006 to 6 June 2007 | 7 June 2007 to 27 Sept. 2007 |
| Time at risk (day/person) | 4592 | 403 |
| No. of patients | 78 | 29 |
| Median age (IQR | 65 (50–73) | 66 (58–73) |
| Male/female ratio | 1.47 | 1.98 |
| Main pathology (%) | Cancer (86.0); others (14.0) | Cancer (87.9); others (12.1) |
| Median day of stay (range) | 22 (1–128) | 13 (1–97) |
| Admitted as prevalent cases | 5 | 1 |
IQR, interquartile range.
Figure 2Epidemic curve.
The diagram shows the 10 incident cases (with respective codes) identified throughout the 16 time fractions (T1–T16) of the retrospective cohort study. Red and blue squares denote died and survived patients, respectively. The incidence rate per 1000 person-days with 95% CI and the total time at risk is reported for each time fraction.
Clinical and epidemiological features of 18 cases of P. aeruinosa infections identified throughout the investigation.
| Summary of cases' clinical and epidemiological features | |||||||||||
| Case code | Sex/age | Diagnosis or symptom(s) | Outcome | Case definition | Positive specimens | Time fraction (room) | Phenotype | ||||
| Cefepime | Ciprofloxacin | Gentamicin | Imipenem | Piperacillin | |||||||
| 1a | Female/69 | UTI | Survived | Excluded | Urine | T3 (Room 1) | R | R | R | S | S |
| Blood | R | R | R | S | S | ||||||
| 1b | Female/69 | UTI | Survived | Excluded | Urine | T4 (Room 3) | I | R | R | I | S |
| Blood | I | R | R | S | S | ||||||
| 2 | Male/59 | Septicaemia | Died | Excluded | Blood | T5 (Room 1) | R | R | R | S | R |
| 3a | Male/66 | Pneumonia | Survived | Excluded | Blood | T5 (Room1) | R | R | R | S | R |
| 6a | Female/45 | UTI | Survived | Excluded | Urine | T7 (Room 2) | I | R | R | S | S |
| 4 | Male/67 | Vomit/diarrhoea | Survived | Excluded | Stool | T8 (Room 4) | I | R | R | S | S |
| 5 | Male/65 | Fever | Survived | Excluded | URT swab | T8 (Room 2) | S | I | S | R | S |
| 6b | Female/45 | Asymptomatic | Survived | Excluded | Urine | T9 (Room 3) | I | R | R | S | S |
| 3b | Male/66 | Fever | Survived | Excluded | CVC swab | T9 (Room 4) | I | R | R | R | S |
| 7 | Male/32 | Pneumonia | Survived | Excluded | URT swab | T12 (Room 2) | S | I | S | R | S |
| 8 | Male/25 | Asymptomatic | Survived | Index case | Urine | T13 (Room 4) | I | R | R | S | S |
| 9 | Male/69 | Pneumonia | Survived | Excluded | Sputum | T15 (Room 4) | S | R | R | S | S |
| 1c | Female/70 | Septicaemia | Died | Probable | Blood | T15 (Room 1) | I | R | R | S | S |
| 10 | Male/60 | Pneumonia | Died | Confirmed | Sputum | T16 (Room 1) | I | R | R | S | S |
| 11 | Female/66 | Pneumonia | Died | Confirmed | Blood | T16 (Room 2) | I | R | R | S | S |
| Sputum | I | R | R | S | S | ||||||
| 12 | Female/73 | Asymptomatic | Survived | Probable | Rectal swab | T16 (Room 2) | I | R | R | S | S |
| URT swab | I | R | R | S | S | ||||||
| 13 | Male/52 | Asymptomatic | Survived | Confirmed | Urethral swab | T16 (Room 4) | I | R | R | S | S |
| CVC swab | I | R | R | S | S | ||||||
| 14 | Female/52 | Asymptomatic | Survived | Excluded | URT swab | NA | S | S | S | S | S |
UTI = urinary tract infection; CVC = central venous catheter; URT = upper respiratory tract; S = sensitive; I = intermediate; R = resistant; NA not applicable because the activity of the unit was moved to another hospital building.
Cases were coded by assigning to each patient a progressive number (i.e.: 1–14); subsequent cases in the same patient were identified by adding a letter (i.e.: a, b and c) to the patient's number.
Prevalent cases.
This patient was admitted to the new located unit at the time of the look-back therefore he is previously identified as an asymptomatic case in the look-back and eventually, as a prevalent case, in the prospective surveillance.
Case identified during look back; for them time-fraction and room number is referred to their last admission.
These samples were used for bacterial typing as shown in fig. 3.
This represent 2 specimens taken the same day and yielding an identical molecular type to that found in the blood culture (data not shown).
Figure 3Epidemiological typing of clinical and environmental P. aeruginosa isolates.
(A) RAPD analysis with primers 208, 228, 241, 272, 275, 277, 287 and ERIC 1, as indicated on top of electropherograms. (B) PFGE analysis of P. aeruginosa isolates. The dendrogram was generated with BioNumerics (Applied Maths) using the unweighted pair-group method with arithmetic averages (UPGMA) and the Dice coefficient. The similarity (%) between isolates is shown at each node of the dendrogram.M is the molecular weight marker (bp); 10 P. aeruginosa from sputum (patient 10); 11 P. aeruginosa from blood culture (patient 11); 13 P. aeruginosa from central venous catheter swab (patient 13); L2 P. aeruginosa from soap; L3 and L4 P. aeruginosa from water.
Association between Pseudomonas aeruginosa infection and selected characteristics.
| Risk analysis | ||||
| Univariate analysis | Multivariate analysis | |||
| Risk factor | IRR (95% CI) | p-value | IRR (95% CI) | p-value |
| Female gender | 0.87 (0.24–3.07) | 0.826 | - | - |
| Age in years at time of admission | 1.35 (0.77–2.36) | 0.288 | 1.93 (0.86–4.32) | 0.109 |
| Days of central venous catheterization | 1.23 (1.04–1.45) | 0.014 | 1.43 (1.05–1.95) | 0.022 |
| Days of parenteral feeding | 1.36 (1.04–1.79) | 0.024 | 1.02 (0.69–1.52) | 0.904 |
| HSCT in the previous years | 2.33 (0.60–9.03) | 0.219 | 3.91 (0.76–20.09) | 0.102 |
| Days of urinary catheterization | 1.20 (0.78–1.84) | 0.412 | 0.82 (0.41–1.63) | 0.571 |
IRR = incidence rate ratio; 95% CI = 95% confidence interval; HSCT = hematopoietic stem cell transplant.
IRR is reported for 10 years increment of age.
IRR is reported for 10 days increment of exposure.
Overall epidemiological outcomes at the end of the outbreak, according to the assumption that case 8 was the index case and the soap dispenser the actual environmental reservoir.
| Summary of the epidemiologic parameters | |
| Epidemic period | 08/03/2007–06/06/2007 |
| No. of exposed susceptible | 19 |
| No. of cases | 5 (3 confirmed, 2 probable) |
| No. of fatalities | 3 |
| Attack rate (%) | 26.3 |
| Fatality rate (%) | 60 |
| Source | Soap dispenser |
| Associated factors | CVC |