Literature DB >> 21354408

Reverse-chaperoning activity of an AAA+ protein.

Cheng Liu1, Mary C McKinney, Yi-Hsing Chen, Tyler M Earnest, Xinghua Shi, Li-Jung Lin, Yoshizumi Ishino, Karin Dahmen, Isaac K O Cann, Taekjip Ha.   

Abstract

Speed and processivity of replicative DNA polymerases can be enhanced via coupling to a sliding clamp. Due to the closed ring shape of the clamp, a clamp loader protein, belonging to the AAA+ class of ATPases, needs to open the ring-shaped clamp before loading it to DNA. Here, we developed real-time fluorescence assays to study the clamp (PCNA) and the clamp loader (RFC) from the mesophilic archaeon Methanosarcina acetivorans. Unexpectedly, we discovered that RFC can assemble a PCNA ring from monomers in solution. A motion-based DNA polymerization assay showed that the PCNA assembled by RFC is functional. This PCNA assembly activity required the ATP-bound conformation of RFC. Our work demonstrates a reverse-chaperoning activity for an AAA+ protein that can act as a template for the assembly of another protein complex.
Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21354408      PMCID: PMC3043212          DOI: 10.1016/j.bpj.2011.01.057

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  28 in total

1.  Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp.

Authors:  X P Kong; R Onrust; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  1992-05-01       Impact factor: 41.582

Review 2.  Cellular DNA replicases: components and dynamics at the replication fork.

Authors:  Aaron Johnson; Mike O'Donnell
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

3.  Mechanism of DNA translocation in a replicative hexameric helicase.

Authors:  Eric J Enemark; Leemor Joshua-Tor
Journal:  Nature       Date:  2006-07-20       Impact factor: 49.962

4.  Rebuilt AAA + motors reveal operating principles for ATP-fuelled machines.

Authors:  Andreas Martin; Tania A Baker; Robert T Sauer
Journal:  Nature       Date:  2005-10-20       Impact factor: 49.962

Review 5.  The DNA replication fork in eukaryotic cells.

Authors:  S Waga; B Stillman
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

6.  Biochemical and mutational analyses of a unique clamp loader complex in the archaeon Methanosarcina acetivorans.

Authors:  Yi-Hsing Chen; Svetlana A Kocherginskaya; Yuyen Lin; Binjon Sriratana; Angelica M Lagunas; Justin B Robbins; Roderick I Mackie; Isaac K O Cann
Journal:  J Biol Chem       Date:  2005-10-27       Impact factor: 5.157

7.  Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA.

Authors:  J M Gulbis; Z Kelman; J Hurwitz; M O'Donnell; J Kuriyan
Journal:  Cell       Date:  1996-10-18       Impact factor: 41.582

8.  Mechanism of proliferating cell nuclear antigen clamp opening by replication factor C.

Authors:  Nina Y Yao; Aaron Johnson; Greg D Bowman; John Kuriyan; Mike O'Donnell
Journal:  J Biol Chem       Date:  2006-04-11       Impact factor: 5.157

9.  Clamp loading, unloading and intrinsic stability of the PCNA, beta and gp45 sliding clamps of human, E. coli and T4 replicases.

Authors:  N Yao; J Turner; Z Kelman; P T Stukenberg; F Dean; D Shechter; Z Q Pan; J Hurwitz; M O'Donnell
Journal:  Genes Cells       Date:  1996-01       Impact factor: 1.891

10.  Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA.

Authors:  T S Krishna; X P Kong; S Gary; P M Burgers; J Kuriyan
Journal:  Cell       Date:  1994-12-30       Impact factor: 41.582

View more
  4 in total

Review 1.  Replication clamps and clamp loaders.

Authors:  Mark Hedglin; Ravindra Kumar; Stephen J Benkovic
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-04-01       Impact factor: 10.005

2.  Intrinsic stability and oligomerization dynamics of DNA processivity clamps.

Authors:  Jennifer K Binder; Lauren G Douma; Suman Ranjit; David M Kanno; Manas Chakraborty; Linda B Bloom; Marcia Levitus
Journal:  Nucleic Acids Res       Date:  2014-04-11       Impact factor: 16.971

3.  Mechanism of opening a sliding clamp.

Authors:  Lauren G Douma; Kevin K Yu; Jennifer K England; Marcia Levitus; Linda B Bloom
Journal:  Nucleic Acids Res       Date:  2017-09-29       Impact factor: 16.971

4.  Loading dynamics of a sliding DNA clamp.

Authors:  Won-Ki Cho; Slobodan Jergic; Daehyung Kim; Nicholas E Dixon; Jong-Bong Lee
Journal:  Angew Chem Int Ed Engl       Date:  2014-05-22       Impact factor: 15.336

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.