Literature DB >> 21347085

Anonymization of administrative billing codes with repeated diagnoses through censoring.

Acar Tamersoy1, Grigorios Loukides, Joshua C Denny, Bradley Malin.   

Abstract

Patient-specific data from electronic medical records (EMRs) is increasingly shared in a de-identified form to support research. However, EMRs are susceptible to noise, error, and variation, which can limit their utility for reuse. One way to enhance the utility of EMRs is to record the number of times diagnosis codes are assigned to a patient when this data is shared. This is, however, challenging because releasing such data may be leveraged to compromise patients' identity. In this paper, we present an approach that, to the best of our knowledge, is the first that can prevent re-identification through repeated diagnosis codes. Our method transforms records to preserve privacy while retaining much of their utility. Experiments conducted using 2676 patients from the EMR system of the Vanderbilt University Medical Center verify that our method is able to retain an average of 95.4% of the diagnosis codes in a common data sharing scenario.

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Year:  2010        PMID: 21347085      PMCID: PMC3041421     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  9 in total

1.  Robust replication of genotype-phenotype associations across multiple diseases in an electronic medical record.

Authors:  Marylyn D Ritchie; Joshua C Denny; Dana C Crawford; Andrea H Ramirez; Justin B Weiner; Jill M Pulley; Melissa A Basford; Kristin Brown-Gentry; Jeffrey R Balser; Daniel R Masys; Jonathan L Haines; Dan M Roden
Journal:  Am J Hum Genet       Date:  2010-04-01       Impact factor: 11.025

2.  An evaluation of the current state of genomic data privacy protection technology and a roadmap for the future.

Authors:  Bradley A Malin
Journal:  J Am Med Inform Assoc       Date:  2004-10-18       Impact factor: 4.497

3.  Identifying diagnostic errors in primary care using an electronic screening algorithm.

Authors:  Hardeep Singh; Eric J Thomas; Myrna M Khan; Laura A Petersen
Journal:  Arch Intern Med       Date:  2007-02-12

4.  The NCBI dbGaP database of genotypes and phenotypes.

Authors:  Matthew D Mailman; Michael Feolo; Yumi Jin; Masato Kimura; Kimberly Tryka; Rinat Bagoutdinov; Luning Hao; Anne Kiang; Justin Paschall; Lon Phan; Natalia Popova; Stephanie Pretel; Lora Ziyabari; Moira Lee; Yu Shao; Zhen Y Wang; Karl Sirotkin; Minghong Ward; Michael Kholodov; Kerry Zbicz; Jeffrey Beck; Michael Kimelman; Sergey Shevelev; Don Preuss; Eugene Yaschenko; Alan Graeff; James Ostell; Stephen T Sherry
Journal:  Nat Genet       Date:  2007-10       Impact factor: 38.330

5.  Development of a large-scale de-identified DNA biobank to enable personalized medicine.

Authors:  D M Roden; J M Pulley; M A Basford; G R Bernard; E W Clayton; J R Balser; D R Masys
Journal:  Clin Pharmacol Ther       Date:  2008-05-21       Impact factor: 6.875

6.  Evaluating re-identification risks with respect to the HIPAA privacy rule.

Authors:  Kathleen Benitez; Bradley Malin
Journal:  J Am Med Inform Assoc       Date:  2010 Mar-Apr       Impact factor: 4.497

7.  The disclosure of diagnosis codes can breach research participants' privacy.

Authors:  Grigorios Loukides; Joshua C Denny; Bradley Malin
Journal:  J Am Med Inform Assoc       Date:  2010 May-Jun       Impact factor: 4.497

8.  Anonymization of electronic medical records for validating genome-wide association studies.

Authors:  Grigorios Loukides; Aris Gkoulalas-Divanis; Bradley Malin
Journal:  Proc Natl Acad Sci U S A       Date:  2010-04-12       Impact factor: 11.205

9.  Evaluating common de-identification heuristics for personal health information.

Authors:  Khaled El Emam; Sam Jabbouri; Scott Sams; Youenn Drouet; Michael Power
Journal:  J Med Internet Res       Date:  2006-11-21       Impact factor: 5.428

  9 in total
  7 in total

1.  Attribute Utility Motivated k-anonymization of datasets to support the heterogeneous needs of biomedical researchers.

Authors:  Huimin Ye; Elizabeth S Chen
Journal:  AMIA Annu Symp Proc       Date:  2011-10-22

2.  Anonymization of longitudinal electronic medical records.

Authors:  Acar Tamersoy; Grigorios Loukides; Mehmet Ercan Nergiz; Yucel Saygin; Bradley Malin
Journal:  IEEE Trans Inf Technol Biomed       Date:  2012-01-27

3.  Reducing patient re-identification risk for laboratory results within research datasets.

Authors:  Ravi V Atreya; Joshua C Smith; Allison B McCoy; Bradley Malin; Randolph A Miller
Journal:  J Am Med Inform Assoc       Date:  2012-07-21       Impact factor: 4.497

4.  Genetic data sharing and privacy.

Authors:  Marco D Sorani; John K Yue; Sourabh Sharma; Geoffrey T Manley; Adam R Ferguson
Journal:  Neuroinformatics       Date:  2015-01

5.  De-identification methods for open health data: the case of the Heritage Health Prize claims dataset.

Authors:  Khaled El Emam; Luk Arbuckle; Gunes Koru; Benjamin Eze; Lisa Gaudette; Emilio Neri; Sean Rose; Jeremy Howard; Jonathan Gluck
Journal:  J Med Internet Res       Date:  2012-02-27       Impact factor: 5.428

Review 6.  The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future.

Authors:  Omri Gottesman; Helena Kuivaniemi; Gerard Tromp; W Andrew Faucett; Rongling Li; Teri A Manolio; Saskia C Sanderson; Joseph Kannry; Randi Zinberg; Melissa A Basford; Murray Brilliant; David J Carey; Rex L Chisholm; Christopher G Chute; John J Connolly; David Crosslin; Joshua C Denny; Carlos J Gallego; Jonathan L Haines; Hakon Hakonarson; John Harley; Gail P Jarvik; Isaac Kohane; Iftikhar J Kullo; Eric B Larson; Catherine McCarty; Marylyn D Ritchie; Dan M Roden; Maureen E Smith; Erwin P Böttinger; Marc S Williams
Journal:  Genet Med       Date:  2013-06-06       Impact factor: 8.822

Review 7.  Use and Understanding of Anonymization and De-Identification in the Biomedical Literature: Scoping Review.

Authors:  Raphaël Chevrier; Vasiliki Foufi; Christophe Gaudet-Blavignac; Arnaud Robert; Christian Lovis
Journal:  J Med Internet Res       Date:  2019-05-31       Impact factor: 5.428

  7 in total

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