Literature DB >> 21344549

Design of a three-helix bundle capable of binding heavy metals in a triscysteine environment.

Saumen Chakraborty1, Joslyn Yudenfreund Kravitz, Peter W Thulstrup, Lars Hemmingsen, William F DeGrado, Vincent L Pecoraro.   

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Year:  2011        PMID： 21344549      PMCID： PMC3058785          DOI： 10.1002/anie.201006413

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


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  34 in total

1.  Hydrophobic core malleability of a de novo designed three-helix bundle protein.

Authors:  S T Walsh; V I Sukharev; S F Betz; N L Vekshin; W F DeGrado
Journal:  J Mol Biol       Date:  2001-01-12       Impact factor: 5.469

2.  Computational de novo design, and characterization of an A(2)B(2) diiron protein.

Authors:  Christopher M Summa; Michael M Rosenblatt; Jae-Kyoung Hong; James D Lear; William F DeGrado
Journal:  J Mol Biol       Date:  2002-08-30       Impact factor: 5.469

Review 3.  Mercury-responsive gene regulation and mercury-199 as a probe of protein structure.

Authors:  D L Huffman; L M Utschig; T V O'Halloran
Journal:  Met Ions Biol Syst       Date:  1997

4.  Peptidic models for the binding of Pb(II), Bi(III) and Cd(II) to mononuclear thiolate binding sites.

Authors:  Manolis Matzapetakis; Debdip Ghosh; Tsu-Chien Weng; James E Penner-Hahn; Vincent L Pecoraro
Journal:  J Biol Inorg Chem       Date:  2006-07-20       Impact factor: 3.358

5.  Computational de novo design and characterization of a four-helix bundle protein that selectively binds a nonbiological cofactor.

Authors:  Frank V Cochran; Sophia P Wu; Wei Wang; Vikas Nanda; Jeffery G Saven; Michael J Therien; William F DeGrado
Journal:  J Am Chem Soc       Date:  2005-02-09       Impact factor: 15.419

6.  Dynamics of a de novo designed three-helix bundle protein studied by 15N, 13C, and 2H NMR relaxation methods.

Authors:  S T Walsh; A L Lee; W F DeGrado; A J Wand
Journal:  Biochemistry       Date:  2001-08-14       Impact factor: 3.162

7.  The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR.

Authors:  Scott T R Walsh; Richard P Cheng; Wayne W Wright; Darwin O V Alonso; Valerie Daggett; Jane M Vanderkooi; William F DeGrado
Journal:  Protein Sci       Date:  2003-03       Impact factor: 6.725

8.  Design of thiolate rich metal binding sites within a peptidic framework.

Authors:  Marek Łuczkowski; Monika Stachura; Virgil Schirf; Borries Demeler; Lars Hemmingsen; Vincent L Pecoraro
Journal:  Inorg Chem       Date:  2008-12-01       Impact factor: 5.165

9.  The application of (199)Hg NMR and (199m)Hg perturbed angular correlation (PAC) spectroscopy to define the biological chemistry of Hg(II): a case study with designed two- and three-stranded coiled coils.

Authors:  Olga Iranzo; Peter W Thulstrup; Seung-Baek Ryu; Lars Hemmingsen; Vincent L Pecoraro
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

10.  The correlation of 113Cd NMR and 111mCd PAC spectroscopies provides a powerful approach for the characterization of the structure of Cd(II)-substituted Zn(II) proteins.

Authors:  Olga Iranzo; Tamas Jakusch; Kyung-Hoon Lee; Lars Hemmingsen; Vincent L Pecoraro
Journal:  Chemistry       Date:  2009       Impact factor: 5.236
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  31 in total

1.  Control of enzyme reaction by a designed metal-ion-dependent α-helical coiled-coil protein.

Authors:  Shigeo Murase; Sonoko Ishino; Yoshizumi Ishino; Toshiki Tanaka
Journal:  J Biol Inorg Chem       Date:  2012-03-31       Impact factor: 3.358

2.  Designing functional metalloproteins: from structural to catalytic metal sites.

Authors:  Melissa L Zastrow; Vincent L Pecoraro
Journal:  Coord Chem Rev       Date:  2013-09       Impact factor: 22.315

Review 3.  Protein design: toward functional metalloenzymes.

Authors:  Fangting Yu; Virginia M Cangelosi; Melissa L Zastrow; Matteo Tegoni; Jefferson S Plegaria; Alison G Tebo; Catherine S Mocny; Leela Ruckthong; Hira Qayyum; Vincent L Pecoraro
Journal:  Chem Rev       Date:  2014-03-24       Impact factor: 60.622

Review 4.  Catalysis and Electron Transfer in De Novo Designed Helical Scaffolds.

Authors:  Tyler B J Pinter; Karl J Koebke; Vincent L Pecoraro
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-02       Impact factor: 15.336

5.  Designing cooperatively folded abiotic uni- and multimolecular helix bundles.

Authors:  Soumen De; Bo Chi; Thierry Granier; Ting Qi; Victor Maurizot; Ivan Huc
Journal:  Nat Chem       Date:  2017-09-18       Impact factor: 24.427

Review 6.  Catalytic peptide assemblies.

Authors:  O Zozulia; M A Dolan; I V Korendovych
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

7.  De novo design and characterization of copper metallopeptides inspired by native cupredoxins.

Authors:  Jefferson S Plegaria; Matteo Duca; Cédric Tard; Thomas J Friedlander; Aniruddha Deb; James E Penner-Hahn; Vincent L Pecoraro
Journal:  Inorg Chem       Date:  2015-09-18       Impact factor: 5.165

8.  Cell surface assembly of HIV gp41 six-helix bundles for facile, quantitative measurements of hetero-oligomeric interactions.

Authors:  Xuebo Hu; Piyali Saha; Xiaoyue Chen; Dogeun Kim; Mahesh Devarasetty; Raghavan Varadarajan; Moonsoo M Jin
Journal:  J Am Chem Soc       Date:  2012-08-28       Impact factor: 15.419

9.  Minimalist de novo Design of Protein Catalysts.

Authors:  Liam R Marshall; Oleksii Zozulia; Zsofia Lengyel-Zhand; Ivan V Korendovych
Journal:  ACS Catal       Date:  2019-09-13       Impact factor: 13.084

10.  De Novo Design of Metalloproteins and Metalloenzymes in a Three-Helix Bundle.

Authors:  Jefferson S Plegaria; Vincent L Pecoraro
Journal:  Methods Mol Biol       Date:  2016
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