Literature DB >> 21329879

Transcriptional activators enhance polyadenylation of mRNA precursors.

Takashi Nagaike1, Charlotte Logan, Ikuko Hotta, Orit Rozenblatt-Rosen, Matthew Meyerson, James L Manley.   

Abstract

Polyadenylation of mRNA precursors is frequently coupled to transcription by RNA polymerase II. Although this coupling is known to involve interactions with the C-terminal domain of the RNA polymerase II largest subunit, the possible role of other factors is not known. Here we show that a prototypical transcriptional activator, GAL4-VP16, stimulates transcription-coupled polyadenylation in vitro. In the absence of GAL4-VP16, specifically initiated transcripts accumulated but little polyadenylation was observed, while in its presence polyadenylation was strongly enhanced. We further show that this stimulation requires the transcription elongation-associated PAF complex (PAF1c), as PAF1c depletion blocked GAL4-VP16-stimulated polyadenylation. Furthermore, knockdown of PAF subunits by siRNA resulted in decreased 3' cleavage, and nuclear export, of mRNA in vivo. Finally, we show that GAL4-VP16 interacts directly with PAF1c and recruits it to DNA templates. Our results indicate that a transcription activator can stimulate transcription-coupled 3' processing and does so via interaction with PAF1c.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21329879      PMCID: PMC3060669          DOI: 10.1016/j.molcel.2011.01.022

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  64 in total

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Authors:  Y Hirose; J L Manley
Journal:  Genes Dev       Date:  2000-06-15       Impact factor: 11.361

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Authors:  Y Takagaki; J L Manley
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

3.  A transcription reinitiation intermediate that is stabilized by activator.

Authors:  N Yudkovsky; J A Ranish; S Hahn
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

4.  A multisubunit factor, CstF, is required for polyadenylation of mammalian pre-mRNAs.

Authors:  Y Takagaki; J L Manley; C C MacDonald; J Wilusz; T Shenk
Journal:  Genes Dev       Date:  1990-12       Impact factor: 11.361

5.  Small-scale preparation of extracts from radiolabeled cells efficient in pre-mRNA splicing.

Authors:  K A Lee; M R Green
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

6.  The C-terminal domain of RNA polymerase II couples mRNA processing to transcription.

Authors:  S McCracken; N Fong; K Yankulov; S Ballantyne; G Pan; J Greenblatt; S D Patterson; M Wickens; D L Bentley
Journal:  Nature       Date:  1997-01-23       Impact factor: 49.962

7.  The polyadenylation factor CstF-64 regulates alternative processing of IgM heavy chain pre-mRNA during B cell differentiation.

Authors:  Y Takagaki; R L Seipelt; M L Peterson; J L Manley
Journal:  Cell       Date:  1996-11-29       Impact factor: 41.582

8.  Ctr9, Rtf1, and Leo1 are components of the Paf1/RNA polymerase II complex.

Authors:  Cherie L Mueller; Judith A Jaehning
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

9.  Synthetic lethal interactions suggest a role for the Saccharomyces cerevisiae Rtf1 protein in transcription elongation.

Authors:  P J Costa; K M Arndt
Journal:  Genetics       Date:  2000-10       Impact factor: 4.562

10.  Paf1p, an RNA polymerase II-associated factor in Saccharomyces cerevisiae, may have both positive and negative roles in transcription.

Authors:  X Shi; A Finkelstein; A J Wolf; P A Wade; Z F Burton; J A Jaehning
Journal:  Mol Cell Biol       Date:  1996-02       Impact factor: 4.272

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  66 in total

Review 1.  RNA polymerase II elongation control.

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Journal:  Annu Rev Biochem       Date:  2012-03-09       Impact factor: 23.643

2.  Histone H3R17me2a mark recruits human RNA polymerase-associated factor 1 complex to activate transcription.

Authors:  Jiacai Wu; Wei Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-26       Impact factor: 11.205

3.  Transcriptional activators enhance polyadenylation of mRNA precursors.

Authors:  Takashi Nagaike; James L Manley
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

4.  RNA polymerase backtracking in gene regulation and genome instability.

Authors:  Evgeny Nudler
Journal:  Cell       Date:  2012-06-22       Impact factor: 41.582

5.  The Paf1 complex subunit Rtf1 buffers cells against the toxic effects of [PSI+] and defects in Rkr1-dependent protein quality control in Saccharomyces cerevisiae.

Authors:  Kristin M Klucevsek; Mary A Braun; Karen M Arndt
Journal:  Genetics       Date:  2012-05-17       Impact factor: 4.562

Review 6.  Alternative cleavage and polyadenylation: extent, regulation and function.

Authors:  Ran Elkon; Alejandro P Ugalde; Reuven Agami
Journal:  Nat Rev Genet       Date:  2013-07       Impact factor: 53.242

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Authors:  Jiannan Guo; David H Price
Journal:  Chem Rev       Date:  2013-08-06       Impact factor: 60.622

8.  Gene expression: Transcriptional activators do double-duty.

Authors:  Mhairi Skinner
Journal:  Nat Rev Mol Cell Biol       Date:  2011-03-16       Impact factor: 94.444

Review 9.  Transcriptional and epigenetic regulation of B cell development.

Authors:  Patricia Santos; Fortuna Arumemi; Kyung Soo Park; Lisa Borghesi; Christine Milcarek
Journal:  Immunol Res       Date:  2011-08       Impact factor: 2.829

Review 10.  Ending the message: poly(A) signals then and now.

Authors:  Nick J Proudfoot
Journal:  Genes Dev       Date:  2011-09-01       Impact factor: 11.361

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